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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89406 Canola plasma membrane 99.22 99.02
AT4G25640.2 Thale cress plasma membrane 89.43 88.91
CDY49481 Canola plasma membrane 63.99 74.83
CDX92726 Canola nucleus, peroxisome, plasma membrane 82.78 70.74
CDY50190 Canola nucleus, peroxisome, plasma membrane 83.37 70.65
VIT_16s0050g00910.t01 Wine grape plasma membrane 66.34 69.33
Solyc03g025240.1.1 Tomato plasma membrane 53.23 68.17
Solyc06g036130.2.1 Tomato plasma membrane 67.12 68.06
PGSC0003DMT400076953 Potato plasma membrane 66.93 67.59
PGSC0003DMT400026355 Potato plasma membrane 66.54 67.46
Solyc03g025230.2.1 Tomato plasma membrane 65.17 66.6
KRG91572 Soybean vacuole 64.38 66.6
Solyc03g025190.2.1 Tomato plasma membrane 65.75 66.4
KRH35253 Soybean plasma membrane 63.99 66.19
VIT_16s0050g00900.t01 Wine grape plasma membrane 63.21 66.05
VIT_16s0050g00930.t01 Wine grape plasma membrane 63.41 65.72
Solyc03g025250.2.1 Tomato plasma membrane 64.38 65.67
Solyc03g025200.2.1 Tomato plasma membrane 60.47 65.05
GSMUA_Achr7P04510_001 Banana plasma membrane 49.9 64.07
PGSC0003DMT400026353 Potato plasma membrane 61.84 62.82
GSMUA_Achr1P15340_001 Banana plasma membrane 57.14 61.47
GSMUA_AchrUn_... Banana golgi, peroxisome, vacuole 59.88 60.47
TraesCS7B01G032100.1 Wheat plasma membrane 55.38 59.08
TraesCS7D01G130700.1 Wheat plasma membrane 54.99 59.03
HORVU6Hr1G091840.1 Barley plasma membrane 57.93 58.96
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 62.62 58.93
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 62.62 58.93
TraesCS7B01G137200.1 Wheat plasma membrane 54.99 58.66
TraesCS7D01G469000.1 Wheat plasma membrane 54.6 58.49
TraesCS7A01G241600.1 Wheat plasma membrane 54.79 58.46
TraesCS7A01G482100.1 Wheat plasma membrane 54.79 58.46
TraesCS7D01G240600.1 Wheat plasma membrane 54.79 58.46
TraesCS7A01G131500.2 Wheat plasma membrane 54.4 58.4
TraesCS7B01G032300.1 Wheat plasma membrane 54.21 58.19
TraesCS7D01G130800.1 Wheat plasma membrane 54.01 57.98
TraesCS6B01G440300.1 Wheat plasma membrane 57.14 57.94
TraesCS6A01G400100.1 Wheat plasma membrane 57.34 57.79
TraesCS7A01G131600.1 Wheat plasma membrane 53.82 57.77
TraesCS7B01G384300.1 Wheat plasma membrane 53.82 57.65
TraesCS6D01G384300.1 Wheat plasma membrane 57.14 57.59
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 57.34 57.56
TraesCS2B01G612900.1 Wheat plasma membrane 53.82 57.29
Os08t0562800-01 Rice peroxisome, plasma membrane, vacuole 50.1 56.76
OQU85979 Sorghum cytosol, peroxisome, vacuole 55.77 56.21
OQU85978 Sorghum plasma membrane 45.4 55.9
Solyc03g025220.2.1 Tomato plasma membrane 54.99 55.64
KRH08881 Soybean plasma membrane 50.1 53.67
TraesCS6D01G384400.1 Wheat plastid 58.32 53.5
TraesCS6A01G400200.1 Wheat cytosol, peroxisome, plasma membrane 58.51 53.49
TraesCS6B01G440400.1 Wheat cytosol, peroxisome, plasma membrane 58.51 53.49
KRH38402 Soybean plasma membrane 50.68 53.07
OQU80697 Sorghum cytosol 54.99 52.82
Os02t0821600-00 Rice plasma membrane 50.1 52.14
KRH08883 Soybean plasma membrane 49.51 51.84
HORVU0Hr1G022320.1 Barley plasma membrane 48.73 51.45
CDY06731 Canola cytosol, peroxisome, plasma membrane 48.53 51.24
CDY17070 Canola cytosol, peroxisome, plasma membrane 48.53 51.24
KRH38403 Soybean plasma membrane 48.92 51.23
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 18.2 50.54
HORVU7Hr1G049240.3 Barley peroxisome 51.08 47.2
CDX81281 Canola plasma membrane 43.84 46.28
CDX83628 Canola plasma membrane 35.42 46.06
CDY33131 Canola golgi, plasma membrane, vacuole 15.85 46.02
CDX83627 Canola cytosol, peroxisome, plasma membrane 45.21 45.92
CDY13643 Canola cytosol, peroxisome, plasma membrane 45.21 45.92
CDX69834 Canola plasma membrane 42.27 45.38
CDX78379 Canola peroxisome, plasma membrane, vacuole 40.7 45.02
CDX69835 Canola plasma membrane 42.66 44.76
CDX97005 Canola plasma membrane 42.66 44.76
CDX81176 Canola plasma membrane 42.66 44.67
CDY07257 Canola endoplasmic reticulum, vacuole 28.57 44.65
CDY16041 Canola cytosol, peroxisome, vacuole 45.01 44.32
CDY26602 Canola cytosol, peroxisome, vacuole 45.01 44.32
CDY70471 Canola cytosol, peroxisome, plasma membrane 26.22 44.22
Zm00001d049910_P001 Maize cytosol, peroxisome, plasma membrane 51.27 44.03
CDY08798 Canola cytosol, peroxisome, plasma membrane 27.59 43.93
CDY40095 Canola plasma membrane 41.68 43.74
CDX78378 Canola plasma membrane 41.49 43.71
CDY01224 Canola plasma membrane 28.77 43.62
CDX85764 Canola plasma membrane 42.66 43.6
CDX81172 Canola plasma membrane 41.29 43.51
CDY14558 Canola plasma membrane 27.4 43.48
CDY21076 Canola cytosol, peroxisome, plasma membrane 44.03 43.35
CDY34598 Canola cytosol, peroxisome, vacuole 44.03 43.35
CDY44967 Canola plasma membrane 33.86 43.03
CDY40093 Canola plasma membrane 42.27 43.03
CDY33962 Canola plasma membrane 26.81 42.81
CDX97001 Canola plasma membrane 41.1 42.77
CDX92916 Canola cytosol, plasma membrane, vacuole 41.49 41.98
CDY08796 Canola plasma membrane 44.42 41.88
CDX93794 Canola plasma membrane 40.31 41.78
CDY33129 Canola cytosol, peroxisome, plasma membrane 41.1 41.58
CDY38631 Canola cytosol, peroxisome, vacuole 41.49 41.41
CDY34637 Canola plasma membrane 37.18 41.39
CDY64933 Canola plasma membrane 40.9 41.39
Zm00001d051886_P001 Maize cytosol, peroxisome, plasma membrane 55.97 41.33
CDY12916 Canola cytosol, plasma membrane, vacuole 40.51 41.32
CDY61495 Canola plasma membrane 44.03 41.28
CDY34833 Canola plasma membrane 36.99 41.18
CDY19507 Canola cytosol, plasma membrane, vacuole 40.31 41.12
CDY65669 Canola cytosol, peroxisome, plasma membrane 39.73 41.01
CDY19294 Canola cytosol, peroxisome, plasma membrane 41.1 40.86
CDY39494 Canola cytosol, peroxisome, plasma membrane 41.1 40.86
CDY39493 Canola cytosol, peroxisome, plasma membrane 40.12 40.76
CDY25329 Canola plasma membrane 39.92 40.72
CDY47166 Canola plasma membrane 39.92 40.72
CDX81174 Canola plasma membrane 32.29 40.64
CDX94064 Canola plasma membrane 32.88 40.58
CDX98711 Canola peroxisome, plasma membrane, vacuole 40.12 40.43
CDY24250 Canola cytosol, peroxisome, plasma membrane 25.05 40.38
CDX79109 Canola plasma membrane 39.14 40.24
CDY54720 Canola plasma membrane 44.23 40.21
CDY69153 Canola cytosol, peroxisome, plasma membrane 24.85 40.06
CDX94061 Canola peroxisome, plasma membrane, vacuole 39.53 39.84
CDY08797 Canola plasma membrane 44.03 39.82
KRH38401 Soybean plasma membrane 40.12 39.27
CDX76391 Canola plasma membrane 38.55 39.24
CDY19295 Canola cytosol, peroxisome, plasma membrane 23.29 39.14
CDY27434 Canola plasma membrane 38.36 39.04
CDY33130 Canola cytosol, peroxisome, vacuole 23.29 38.64
CDX98713 Canola plasma membrane 34.25 38.46
CDX94063 Canola plasma membrane 37.96 38.26
CDY64820 Canola plasma membrane 38.94 38.12
CDX98712 Canola plasma membrane 37.77 38.07
CDY27431 Canola plasma membrane 36.79 37.08
CDX98344 Canola plasma membrane 36.59 36.88
CDX76392 Canola plasma membrane 33.27 36.88
CDX67772 Canola plasma membrane 36.4 36.69
CDY38453 Canola plasma membrane 28.57 36.68
CDY51758 Canola plasma membrane 35.62 36.47
CDY21177 Canola plasma membrane 35.42 36.35
CDY29945 Canola plasma membrane 35.03 35.94
CDY50654 Canola plasma membrane 35.03 35.87
CDY16896 Canola plasma membrane 32.68 33.67
CDX84047 Canola plasma membrane 38.75 28.12
CDX69836 Canola plasma membrane 42.86 21.34
Protein Annotations
EnsemblPlants:CDX94432EnsemblPlantsGene:GSBRNA2T00157576001GO:A0A078DZU9GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF184PFAM:PF01554ProteinID:CDX94432
ProteinID:CDX94432.1TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EF0262MapMan:24.2.4.1.1:
Description
BnaC01g17520D
Coordinates
chrLK031881:+:1121498..1124864
Molecular Weight (calculated)
55903.4 Da
IEP (calculated)
8.615
GRAVY (calculated)
0.717
Length
511 amino acids
Sequence
(BLAST)
001: MDPTTPLLSH GGKVEDYAPA RTWSDVKRVL CTESAKLWLI AAPIGFNVIC QYGVSSVTNI FVGHIGEVEL SAVSISLSVI GTFSFGFLLG MGSALETLCG
101: QAFGAGQVHM LGIYMQRSWI ILFVSCLLLL PIYIFATPVL RLLGQAEEIA VPAGQFTLLT IPQLFSLALN FPTSKFLQAQ SKVTVIAWIG FVALLLHVGM
201: LWLFIIVFGW GTNGAALAFN ITQWEITISQ IVYVIGWCNE GWTGLSWLAF KEIWAFVRLS IASAVMLCLE IWYMMSIIVL TGHLDDPVIA VGSLSICMNL
301: NGVEAMLFIG INAAISVRVS NELGLGRPRA AKYSVYVTVF QSLLIGLVFM VAIILAKDHF AIIFTSSEVL QRAVSKLAYL LGITMVLNSV QPVISGVAIG
401: GGWQGLVAYI NLGSYYIFGL PFGYFLGYKA NLGVMGLWAG MISGIALQTL LLMFVLYKTN WNKEVAETSE RMKKWGGSTE TKSKESGWPS GLRRQTQVLV
501: FERGRGFKSH F
Best Arabidopsis Sequence Match ( AT4G25640.2 )
(BLAST)
001: MDPTAPLLTH GGEVEEDYAP ARSWTDVKRV LSTESAKLWM IAAPVGFNII CQYGVSSVTN IFVGHIGEVE LSAVSISLSV IGTFSFGFLL GMGSALETLC
101: GQAYGAGQVN MLGVYMQRSW IILFVSCFFL LPIYIFATPV LRLLGQAEEI AVPAGQFTLL TIPQLFSLAF NFPTSKFLQA QSKVVAIAWI GFVALSLHVI
201: MLWLFIIEFG WGTNGAALAF NITNWGTAIA QIVYVIGWCN EGWTGLSWLA FKEIWAFVRL SIASAVMLCL EIWYMMSIIV LTGRLDNAVI AVDSLSICMN
301: INGLEAMLFI GINAAISVRV SNELGLGRPR AAKYSVYVTV FQSLLIGLVF MVAIIIARDH FAIIFTSSKV LQRAVSKLAY LLGITMVLNS VQPVVSGVAV
401: GGGWQGLVAY INLGCYYIFG LPFGYLLGYI ANFGVMGLWS GMIAGTALQT LLLLIVLYKT NWNKEVEETM ERMKKWGGSE TTSKDILASG WPSGLRRQTQ
501: VLVFVRGRGF KPHF
Arabidopsis Description
ATDTX35Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F4JTB2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.