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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:peroxisome
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G440300.1 Wheat plasma membrane 97.21 96.83
TraesCS6D01G384300.1 Wheat plasma membrane 97.61 96.65
TraesCS6A01G400100.1 Wheat plasma membrane 97.41 96.45
OQU85978 Sorghum plasma membrane 64.94 78.55
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 67.13 66.21
GSMUA_Achr1P15340_001 Banana plasma membrane 61.35 64.84
GSMUA_Achr7P04510_001 Banana plasma membrane 50.6 63.82
GSMUA_AchrUn_... Banana golgi, peroxisome, vacuole 62.75 62.25
VIT_15s0046g01800.t01 Wine grape plasma membrane 58.57 60.87
Bra013906.1-P Field mustard plasma membrane 59.16 60.74
Bra019147.1-P Field mustard plasma membrane 57.57 59.22
KRG91572 Soybean vacuole 57.37 58.3
CDX89406 Canola plasma membrane 59.16 58.01
CDX94432 Canola plasma membrane 58.96 57.93
KRH35253 Soybean plasma membrane 56.97 57.89
VIT_16s0050g00910.t01 Wine grape plasma membrane 56.18 57.67
VIT_16s0050g00930.t01 Wine grape plasma membrane 56.37 57.4
AT4G25640.2 Thale cress plasma membrane 58.76 57.39
VIT_16s0050g00900.t01 Wine grape plasma membrane 55.58 57.06
KRH00809 Soybean plasma membrane 56.37 56.04
KRH40412 Soybean plasma membrane 56.37 55.49
Solyc03g025240.1.1 Tomato plasma membrane 44.02 55.39
AT4G00350.1 Thale cress cytosol, peroxisome, plasma membrane 59.56 55.17
PGSC0003DMT400076953 Potato plasma membrane 55.58 55.14
PGSC0003DMT400026355 Potato plasma membrane 55.18 54.96
Solyc06g036130.2.1 Tomato plasma membrane 55.18 54.96
Solyc03g025190.2.1 Tomato plasma membrane 54.98 54.55
Solyc03g025230.2.1 Tomato plasma membrane 54.18 54.4
HORVU0Hr1G022320.1 Barley plasma membrane 52.39 54.34
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 54.98 53.8
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 58.17 53.78
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 58.17 53.78
Solyc03g025200.2.1 Tomato plasma membrane 50.6 53.47
CDY49481 Canola plasma membrane 45.62 52.4
Solyc03g025250.2.1 Tomato plasma membrane 51.79 51.9
PGSC0003DMT400026353 Potato plasma membrane 51.2 51.09
Bra010453.1-P Field mustard plasma membrane 49.2 50.61
CDX92726 Canola nucleus, peroxisome, plasma membrane 57.97 48.66
HORVU7Hr1G049240.3 Barley peroxisome 53.59 48.64
CDY50190 Canola nucleus, peroxisome, plasma membrane 58.37 48.59
Solyc03g025220.2.1 Tomato plasma membrane 47.41 47.13
KRH08881 Soybean plasma membrane 44.02 46.33
KRH08883 Soybean plasma membrane 44.42 45.7
KRH38402 Soybean plasma membrane 44.22 45.49
KRH38403 Soybean plasma membrane 43.63 44.88
HORVU3Hr1G074290.9 Barley nucleus, peroxisome, plasma membrane 43.03 43.29
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 42.23 42.91
HORVU4Hr1G011690.1 Barley plasma membrane 44.42 42.8
HORVU2Hr1G046420.16 Barley plasma membrane 42.03 42.71
HORVU3Hr1G014320.2 Barley plasma membrane 41.24 42.42
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 44.02 42.26
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 42.63 41.63
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 41.83 41.34
HORVU5Hr1G045360.3 Barley cytosol, peroxisome, plasma membrane 41.24 40.83
HORVU5Hr1G069900.5 Barley golgi 41.24 40.43
HORVU2Hr1G117540.1 Barley plasma membrane 38.45 40.38
HORVU5Hr1G086830.4 Barley cytosol, peroxisome, plasma membrane 39.84 39.6
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 40.04 38.95
HORVU5Hr1G008770.1 Barley plasma membrane 35.06 34.85
KRH38401 Soybean plasma membrane 35.46 34.1
HORVU0Hr1G010460.2 Barley cytosol 6.18 29.25
Protein Annotations
EnsemblPlants:HORVU6Hr1G091840.1EnsemblPlantsGene:HORVU6Hr1G091840GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF184PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002955D41UniProt:M0V4D4MapMan:24.2.4.1.1:
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:M0V4D4]
Coordinates
chrchr6H:+:576570837..576573217
Molecular Weight (calculated)
53050.1 Da
IEP (calculated)
5.184
GRAVY (calculated)
0.695
Length
502 amino acids
Sequence
(BLAST)
001: MVLMEAPLLV KRPEEDAAAP RSYAEAREAL VREAERLWAI AAPITFNILC LYGVNSATQL FAGRLGNLQL SAAAVGLSVV SNFSFGFLLG MGSALETLCG
101: QAYGAGQLGA LGVYMQRSWI ILAVSAALLS PLYVFATPIL RALGQDDAIA GAAGDFTLRI LPQMFSLALT FPTQKFLQAQ SKVMVLAWIS LAALAAHVAM
201: LYLFVSRLGW GLAGAAAAYD VTSWGIAVAQ VVYVVRWCGD GGGWDGLSWK AFEGLWAFAK LSLASAVMLC LEVWYMMVLV VLTGHLDDAE IAVGSVSICM
301: NLNGWEAMLF IGLNAAISVR VSNELGSGRP RAAKHAVASV IVQSLLIGLV AMALILAYRN SFAALFTGDR GMQAAVGKVA YLLAVTMVLN SVQPVISGVA
401: IGGGWQALVA YINLGCYYAF GLPLGFCLGY LLRLGPQGIW AGMLCGTALQ TAVLLAVIWN TDWEDEAAQA SERISAWAGE GKQVHGDAGV GDDGDLKEAF
501: RV
Best Arabidopsis Sequence Match ( AT4G00350.1 )
(BLAST)
001: MEIPVREERR SSSSSAGPLQ QTISLAADDA IDSGPSSPLV VKVSVFETEH ETTKLIHAPS TLLGETTGDA DFPPIQSFRD AKLVCVVETS KLWEIAAPIA
101: FNILCNYGVN SFTSIFVGHI GDLELSAVAI ALSVVSNFSF GFLLGMASAL ETLCGQAFGA GQMDMLGVYM QRSWLILLGT SVCLLPLYIY ATPLLILLGQ
201: EPEIAEISGK FTTQIIPQMF ALAINFPTQK FLQSQSKVGI MAWIGFFALT LHIFILYLFI NVFKWGLNGA AAAFDVSAWG IAIAQVVYVV GWCKDGWKGL
301: SWLAFQDVWP FLKLSFASAV MLCLEIWYFM TIIVLTGHLE DPVIAVGSLS ICMNINGWEG MLFIGINAAI SVRVSNELGS GHPRAAKYSV IVTVIESLVI
401: GVVCAIVILI TRDDFAVIFT ESEEMRKAVA DLAYLLGITM ILNSLQPVIS GVAVGGGWQA PVAYINLFCY YAFGLPLGFL LGYKTSLGVQ GIWIGMICGT
501: SLQTLILLYM IYITNWNKEV EQASERMKQW GAGYEKLEKI AT
Arabidopsis Description
DTX34Protein DETOXIFICATION 34 [Source:UniProtKB/Swiss-Prot;Acc:F4JH46]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.