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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 4
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G091840.1 Barley plasma membrane 78.55 64.94
TraesCS6A01G400100.1 Wheat plasma membrane 78.8 64.5
TraesCS6B01G440300.1 Wheat plasma membrane 78.07 64.29
TraesCS6D01G384300.1 Wheat plasma membrane 78.31 64.1
GSMUA_Achr7P04510_001 Banana plasma membrane 52.05 54.27
Solyc03g025240.1.1 Tomato plasma membrane 51.57 53.63
GSMUA_Achr1P15340_001 Banana plasma membrane 61.2 53.47
OQU85979 Sorghum cytosol, peroxisome, vacuole 65.3 53.45
GSMUA_AchrUn_... Banana golgi, peroxisome, vacuole 61.45 50.4
VIT_15s0046g01800.t01 Wine grape plasma membrane 56.63 48.65
Bra013906.1-P Field mustard plasma membrane 56.14 47.65
Bra019147.1-P Field mustard plasma membrane 55.42 47.13
OQU87609 Sorghum plasma membrane 46.27 46.94
KRG91572 Soybean vacuole 55.42 46.56
VIT_16s0050g00910.t01 Wine grape plasma membrane 54.46 46.22
KRH35253 Soybean plasma membrane 54.94 46.15
VIT_16s0050g00930.t01 Wine grape plasma membrane 54.7 46.04
Solyc03g025200.2.1 Tomato plasma membrane 52.29 45.68
VIT_16s0050g00900.t01 Wine grape plasma membrane 53.73 45.6
CDX89406 Canola plasma membrane 56.14 45.51
PGSC0003DMT400076953 Potato plasma membrane 55.42 45.45
CDX94432 Canola plasma membrane 55.9 45.4
Solyc06g036130.2.1 Tomato plasma membrane 54.7 45.04
AT4G25640.2 Thale cress plasma membrane 55.66 44.94
KRH00809 Soybean plasma membrane 54.46 44.75
KRH40412 Soybean plasma membrane 54.7 44.51
Solyc03g025230.2.1 Tomato plasma membrane 53.49 44.4
PGSC0003DMT400026355 Potato plasma membrane 53.49 44.05
Solyc03g025190.2.1 Tomato plasma membrane 53.49 43.87
PGSC0003DMT400026353 Potato plasma membrane 52.77 43.54
OQU80697 Sorghum cytosol 55.18 43.05
Solyc03g025250.2.1 Tomato plasma membrane 51.57 42.71
AT4G00350.1 Thale cress cytosol, peroxisome, plasma membrane 54.7 41.88
CDY49481 Canola plasma membrane 44.1 41.88
Bra010453.1-P Field mustard plasma membrane 49.16 41.8
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 53.49 40.88
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 53.49 40.88
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 49.4 39.96
EES15223 Sorghum plasma membrane 48.92 39.96
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 48.67 39.45
Solyc03g025220.2.1 Tomato plasma membrane 47.95 39.41
CDX92726 Canola nucleus, peroxisome, plasma membrane 55.9 38.8
CDY50190 Canola nucleus, peroxisome, plasma membrane 55.9 38.47
KRH08881 Soybean plasma membrane 43.61 37.95
EER91211 Sorghum plasma membrane 45.06 37.93
KRH38402 Soybean plasma membrane 43.13 36.68
KXG37120 Sorghum plasma membrane 44.58 36.63
EER91321 Sorghum plasma membrane 44.1 36.53
KRH08883 Soybean plasma membrane 42.89 36.48
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 43.37 36.36
KRH38403 Soybean plasma membrane 42.65 36.27
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 42.17 35.28
EER91319 Sorghum cytosol, peroxisome, plasma membrane 42.65 35.19
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 42.41 34.85
KXG38133 Sorghum cytosol, peroxisome, vacuole 43.13 34.69
EES15585 Sorghum cytosol, peroxisome, plasma membrane 43.86 34.67
EER96891 Sorghum cytosol, peroxisome, plasma membrane 40.48 34.57
EER93896 Sorghum cytosol, peroxisome, plasma membrane 43.13 34.16
OQU92001 Sorghum peroxisome 43.13 33.9
EER96893 Sorghum cytosol, peroxisome, vacuole 38.8 33.75
KXG35815 Sorghum plasma membrane 39.04 33.61
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 42.17 33.33
EES09180 Sorghum cytosol, peroxisome, plasma membrane 42.41 33.27
OQU79625 Sorghum golgi, plasma membrane, vacuole 40.72 33.07
KXG38740 Sorghum plasma membrane 39.76 32.42
KRH38401 Soybean plasma membrane 36.39 28.93
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1Z5RQM8GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famEnsemblPlants:OQU85978ProteinID:OQU85978ProteinID:OQU85978.1PFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF184EnsemblPlantsGene:SORBI_3004G349550TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B8BA05A
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr4:-:67834255..67836102
Molecular Weight (calculated)
43618.8 Da
IEP (calculated)
7.992
GRAVY (calculated)
0.708
Length
415 amino acids
Sequence
(BLAST)
001: MASALETLCG QAYGAGHLHL LGVYAQRSVV ILAASALLLS PLYLLAAPIL RALGQDEAVA AAAGDFTLRT LPQLLSLPLA FPTQKLLQAQ GEVGALAWIG
101: AAALAAHVAM LALFVPVLGW GLRGAAAAYD VTSWVVALAQ VAYVTRRCRG RGWDGLSWDA LRGLWPFARL SLASAVMLCL EVWYMTVLVV LTGRLDDAEI
201: AVGSVSICLN VNGWEAMLFI GLNAAISVRV SNELGSGRAR AAKHAVAAVV AQSLAMGLVA MALVLAYRNS FAVLFTGDRD MQAAVGKVAH LLAATMVLNS
301: VQPVISGVAI GGGWQALVAY INLGCYYALG LPLGFCLGYL LRLGAPGIWA GMLCGTALQT AILLLLIWRT DWEAEAALAK ERISAWSGEC RHVDVVKQQQ
401: GDTGSDSDLK ANLRV
Best Arabidopsis Sequence Match ( AT4G25640.1 )
(BLAST)
001: MDPTAPLLTH GGEVEEDYAP ARSWTDVKRV LSTESAKLWM IAAPVGFNII CQYGVSSVTN IFVGHIGEVE LSAVSISLSV IGTFSFGFLL GMGSALETLC
101: GQAYGAGQVN MLGVYMQRSW IILFVSCFFL LPIYIFATPV LRLLGQAEEI AVPAGQFTLL TIPQLFSLAF NFPTSKFLQA QSKVVAIAWI GFVALSLHVI
201: MLWLFIIEFG WGTNGAALAF NITNWGTAIA QIVYVIGWCN EGWTGLSWLA FKEIWAFVRL SIASAVMLCL EIWYMMSIIV LTGRLDNAVI AVDSLSICMN
301: INGLEAMLFI GINAAISVRV SNELGLGRPR AAKYSVYVTV FQSLLIGLVF MVAIIIARDH FAIIFTSSKV LQRAVSKLAY LLGITMVLNS VQPVVSGVAV
401: GGGWQGLVAY INLGCYYIFG LPFGYLLGYI ANFGVMGLWS GMIAGTALQT LLLLIVLYKT NWNKEVEETM ERMKKWGGSE TTSKDILA
Arabidopsis Description
ATDTX35Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F4JTB2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.