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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 26.93 73.91
GSMUA_Achr7P11770_001 Banana plasma membrane 62.38 73.43
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 74.65 71.81
GSMUA_Achr8P18130_001 Banana mitochondrion, plasma membrane, vacuole 68.51 70.9
GSMUA_Achr3P21260_001 Banana plasma membrane 61.98 68.04
AT5G65380.1 Thale cress cytosol, peroxisome, plasma membrane 62.57 65.02
Bra024381.1-P Field mustard plasma membrane 62.18 64.88
Bra037814.1-P Field mustard plasma membrane 61.19 63.98
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 59.6 63.64
CDX81281 Canola plasma membrane 60.99 63.64
KRH74515 Soybean cytosol, peroxisome, plasma membrane 59.6 61.3
CDX78379 Canola peroxisome, plasma membrane, vacuole 55.84 61.04
Bra006059.1-P Field mustard plasma membrane 58.61 60.78
VIT_18s0001g06790.t01 Wine grape plasma membrane 58.42 60.2
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 59.01 60.2
CDY33962 Canola plasma membrane 38.02 60.0
CDX81176 Canola plasma membrane 57.82 59.84
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 57.03 59.75
CDY40095 Canola plasma membrane 56.63 58.73
CDX69834 Canola plasma membrane 55.25 58.61
CDX69835 Canola plasma membrane 56.44 58.52
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 57.03 58.42
CDX78378 Canola plasma membrane 56.04 58.35
CDX97005 Canola plasma membrane 56.24 58.32
KRH62283 Soybean cytosol, peroxisome, plasma membrane 58.02 58.25
CDX97001 Canola plasma membrane 56.63 58.25
KXG35815 Sorghum plasma membrane 55.45 58.09
AT5G10420.1 Thale cress plasma membrane 56.24 58.08
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 56.63 58.01
CDY40093 Canola plasma membrane 57.62 57.97
CDY08796 Canola plasma membrane 62.18 57.93
PGSC0003DMT400005437 Potato cytosol, peroxisome, plasma membrane 57.23 57.92
CDX81172 Canola plasma membrane 55.45 57.73
CDX85764 Canola plasma membrane 57.03 57.6
CDY61495 Canola plasma membrane 61.98 57.43
AT5G44050.1 Thale cress plasma membrane 55.25 56.82
Bra009034.1-P Field mustard plasma membrane 48.12 56.64
EER96893 Sorghum cytosol, peroxisome, vacuole 53.27 56.39
CDY70471 Canola cytosol, peroxisome, plasma membrane 33.66 56.11
CDY14558 Canola plasma membrane 35.64 55.9
VIT_18s0001g06820.t01 Wine grape plasma membrane 53.27 55.58
CDY08798 Canola cytosol, peroxisome, plasma membrane 35.25 55.45
CDX81174 Canola plasma membrane 44.36 55.17
CDY54720 Canola plasma membrane 61.39 55.16
EER96891 Sorghum cytosol, peroxisome, plasma membrane 52.87 54.94
Solyc04g074840.2.1 Tomato plasma membrane 54.65 54.87
CDY08797 Canola plasma membrane 60.59 54.16
Bra006058.1-P Field mustard plasma membrane 55.25 53.04
Bra024379.1-P Field mustard plasma membrane 57.82 51.41
Bra028589.1-P Field mustard peroxisome 40.59 49.4
KRH62279 Soybean cytosol, peroxisome, plasma membrane 50.49 48.66
PGSC0003DMT400005432 Potato plasma membrane 45.54 48.52
EES15585 Sorghum cytosol, peroxisome, plasma membrane 49.31 47.43
EES09180 Sorghum cytosol, peroxisome, plasma membrane 47.72 45.56
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 43.37 44.15
OQU87609 Sorghum plasma membrane 35.45 43.77
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 44.36 43.75
EES15223 Sorghum plasma membrane 43.76 43.5
EER91319 Sorghum cytosol, peroxisome, plasma membrane 43.17 43.34
KXG37120 Sorghum plasma membrane 43.17 43.17
OQU85978 Sorghum plasma membrane 34.85 42.41
EER91321 Sorghum plasma membrane 41.98 42.32
KXG38133 Sorghum cytosol, peroxisome, vacuole 42.97 42.05
OQU85979 Sorghum cytosol, peroxisome, vacuole 41.58 41.42
EER93896 Sorghum cytosol, peroxisome, plasma membrane 42.77 41.22
EER91211 Sorghum plasma membrane 39.01 39.96
Solyc04g074860.2.1 Tomato plasma membrane 43.76 38.84
OQU80697 Sorghum cytosol 40.2 38.16
OQU79625 Sorghum golgi, plasma membrane, vacuole 37.03 36.59
OQU92001 Sorghum peroxisome 37.82 36.17
KXG38740 Sorghum plasma membrane 35.45 35.17
CDX69836 Canola plasma membrane 55.25 27.19
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1W0VX18GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famEnsemblPlants:OQU86679ProteinID:OQU86679ProteinID:OQU86679.1PFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF80EnsemblPlantsGene:SORBI_3003G126200TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0003C70D10
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:+:11578226..11585852
Molecular Weight (calculated)
55301.3 Da
IEP (calculated)
7.715
GRAVY (calculated)
0.614
Length
505 amino acids
Sequence
(BLAST)
001: MAHGRRKDDE EDCTCTAALL LRGDDAEAWK EEEWHHHHHH HHASSSDLWR WMRRVREESR KLWEVVGPAI FTRAAIYSLN VVMQAVAGHL GDLELASVSF
101: ACTVLTGFNY GLMLGMASAL ETLCGQAYGA KKYHMMGVYM QRSWIVLFVC ALLLTPMYFF TEDLLLVTGQ PPKLSAMAGR VSMWFIPLHF SQAFLFPLQL
201: FLQCQRKNLA NATAAAAALG IHLFVSWLFV ARLKLGLVGV ALTLSVSWWT ITAMLFVYVT CGGCPETWHG FTAEAFAGLG EFIKLSAASG VMLCLENWYY
301: RILILLTGNL KNAAVAVDAL SICMNINGWE MTIPLAFFAG TGVRVANELG AGNGIGARFA AIVSSTTSLV IGLFFWVLIM GLHSKIALIF TTSAVVLDAV
401: DKLSLLLAFT ILLNSVQPVL SGVAVGSGWQ STVAYINIGC YYIIGIPMGV LLGWLFNLGV LGIWAGMIGG TAVQTLILAI ITVRCDWEKQ AIIASTRMDK
501: LSQVR
Best Arabidopsis Sequence Match ( AT5G65380.1 )
(BLAST)
001: MRGGDGEEGS ESRVALLKSP HTAEEDGEGL KDRILVETKK LWQIVGPAIF SRVTTYSMLV ITQAFAGHLG DLELAAISIV NNVTVGFNFG LLLGMASALE
101: TLCGQAFGAK KYHMLGVYMQ RSWIVLFFCC VLLLPTYIFT TPVLKFLGQP DDIAELSGVV AIWVIPLHFA FTLSFPLQRF LQCQLKNRVT AYAAAVALVV
201: HILVCWLFVD GLKLGVVGTV ATISISWWVN VLILLVYSTC GGCPLTWTGL SSEALTGLWE FLKLSASSGV MLCLENWYYR ILIIMTGNLQ NARIAVDSLS
301: ICMAINGWEM MIPLAFFAGT GVRVANELGA GNGKGARFAT IVSVTQSLII GLFFWVLIML LHNQIAWIFS SSVAVLDAVN KLSLLLAFTV LLNSVQPVLS
401: GVAVGSGWQS YVAYINLGCY YCIGVPLGFL MGWGFKLGVM GIWGGMIFGG TAVQTMILSF ITMRCDWEKE AQKASARINK WSNTIK
Arabidopsis Description
DTX27Protein DETOXIFICATION 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.