Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- cytosol 1
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G21690.1 | EES02290 | AT3G16310.1 | 21798944 |
| AT3G21690.1 | EES19830 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d013811_P001 | Maize | cytosol, peroxisome, plasma membrane | 82.44 | 85.38 |
| Os03t0571700-01 | Rice | golgi, peroxisome, plasma membrane | 55.34 | 78.38 |
| KXG38133 | Sorghum | cytosol, peroxisome, vacuole | 71.18 | 72.29 |
| KXG37120 | Sorghum | plasma membrane | 67.75 | 70.3 |
| CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 42.37 | 70.03 |
| EER91319 | Sorghum | cytosol, peroxisome, plasma membrane | 66.98 | 69.78 |
| CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 41.98 | 69.4 |
| KRH26788 | Soybean | plasma membrane | 66.22 | 68.85 |
| CDY33130 | Canola | cytosol, peroxisome, vacuole | 40.46 | 68.83 |
| EER91321 | Sorghum | plasma membrane | 65.46 | 68.46 |
| Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.08 | 67.52 |
| CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 65.08 | 67.52 |
| Bra001840.1-P | Field mustard | plasma membrane | 58.78 | 67.4 |
| Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 64.69 | 67.4 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 61.83 | 66.94 |
| KRH56125 | Soybean | plasma membrane | 66.03 | 66.92 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 64.5 | 66.8 |
| Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 63.55 | 66.73 |
| CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 38.55 | 66.45 |
| Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 61.64 | 66.32 |
| CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 62.6 | 66.26 |
| Solyc12g005850.1.1 | Tomato | plasma membrane | 64.69 | 66.21 |
| CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 63.55 | 66.2 |
| CDX92916 | Canola | cytosol, plasma membrane, vacuole | 63.55 | 65.94 |
| VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 63.74 | 65.88 |
| CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 64.5 | 65.76 |
| CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 64.5 | 65.76 |
| EER97294 | Sorghum | endoplasmic reticulum, peroxisome, plasma membrane | 62.21 | 65.73 |
| CDY38631 | Canola | cytosol, peroxisome, vacuole | 64.12 | 65.62 |
| VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 63.17 | 65.29 |
| Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 62.02 | 65.0 |
| VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 63.55 | 64.66 |
| CDY33131 | Canola | golgi, plasma membrane, vacuole | 21.56 | 64.2 |
| KRH25385 | Soybean | plasma membrane | 52.67 | 62.59 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 60.11 | 60.11 |
| OQU87609 | Sorghum | plasma membrane | 37.21 | 47.68 |
| VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 60.11 | 45.78 |
| OQU79625 | Sorghum | golgi, plasma membrane, vacuole | 44.27 | 45.4 |
| OQU85978 | Sorghum | plasma membrane | 34.16 | 43.13 |
| EES15223 | Sorghum | plasma membrane | 41.6 | 42.91 |
| OQU86679 | Sorghum | cytosol, peroxisome, plasma membrane | 41.22 | 42.77 |
| EER96893 | Sorghum | cytosol, peroxisome, vacuole | 38.93 | 42.77 |
| OQU85979 | Sorghum | cytosol, peroxisome, vacuole | 41.22 | 42.6 |
| OQU80740 | Sorghum | cytosol, peroxisome, plasma membrane | 41.41 | 42.38 |
| KXG35815 | Sorghum | plasma membrane | 38.55 | 41.91 |
| OQU93093 | Sorghum | cytosol, peroxisome, plasma membrane | 41.98 | 41.9 |
| EER96891 | Sorghum | cytosol, peroxisome, plasma membrane | 38.36 | 41.36 |
| KXG25339 | Sorghum | cytosol, peroxisome, plasma membrane | 38.36 | 40.61 |
| EER91211 | Sorghum | plasma membrane | 38.17 | 40.57 |
| OQU80697 | Sorghum | cytosol | 41.03 | 40.41 |
| EES15585 | Sorghum | cytosol, peroxisome, plasma membrane | 40.46 | 40.38 |
| EES09180 | Sorghum | cytosol, peroxisome, plasma membrane | 38.93 | 38.56 |
| KXG38740 | Sorghum | plasma membrane | 34.35 | 35.36 |
| OQU92001 | Sorghum | peroxisome | 35.5 | 35.23 |
Protein Annotations
| MapMan:24.2.4.1.1 | EntrezGene:8065645 | UniProt:C5WUC6 | ncoils:Coil | EnsemblPlants:EER93896 | ProteinID:EER93896 |
| ProteinID:EER93896.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006855 |
| GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| InterPro:MATE_fam | PFAM:PF01554 | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF261 | EnsemblPlantsGene:SORBI_3001G185600 | unigene:Sbi.13072 |
| TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI0001A82639 | RefSeq:XP_002466898.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:15876732..15881035
Molecular Weight (calculated)
56033.3 Da
IEP (calculated)
7.868
GRAVY (calculated)
0.681
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTASDQNTP LLPADGGNDD GEGVAVLPGE AAGGAGGGHG GVSAQLERIL ADESVPRARR LARAARVELR LLVALAAPAV AVYMINYSMS LSTRIFCGQL
101: GTLELAAASL GNVGIQVFAY GLMLGMGSAV ETLCGQAYGA HKYDMLGIYM QRSIVLLTAT GVPLAVVYVF SKQILLLLGE SERIAEAAWV FVLGLIPQIF
201: AYAFNFPIQK FLQAQSIVAP SAYISTAALA GHLVLSWLAV YRMGLGLLGA SLILSLSWWV IVVAQFVYIV RSQRCRRRTW TGFSCRAFSG LPEFLKLSFA
301: SAVMLCLETW YTQITVLVAG LLKDPEIALD SLAVCMSISG WVFMVSVGFN AAASVRVSNE LGAGHPMATS FSVKVVTTLS LMVASIIAVI VMCLRDYISY
401: VFTKGDDVAR AVSTMTPLLA VTIVLNGIQP VLSGVAVGCG WQAFVAYVNI ACYYGIGIPL GCVLGFYFDL GAMGIWGGMI GGLIVQTLVL IWVTLRTDWN
501: KEVEQARMRL NKWEDKKKPL LAED
101: GTLELAAASL GNVGIQVFAY GLMLGMGSAV ETLCGQAYGA HKYDMLGIYM QRSIVLLTAT GVPLAVVYVF SKQILLLLGE SERIAEAAWV FVLGLIPQIF
201: AYAFNFPIQK FLQAQSIVAP SAYISTAALA GHLVLSWLAV YRMGLGLLGA SLILSLSWWV IVVAQFVYIV RSQRCRRRTW TGFSCRAFSG LPEFLKLSFA
301: SAVMLCLETW YTQITVLVAG LLKDPEIALD SLAVCMSISG WVFMVSVGFN AAASVRVSNE LGAGHPMATS FSVKVVTTLS LMVASIIAVI VMCLRDYISY
401: VFTKGDDVAR AVSTMTPLLA VTIVLNGIQP VLSGVAVGCG WQAFVAYVNI ACYYGIGIPL GCVLGFYFDL GAMGIWGGMI GGLIVQTLVL IWVTLRTDWN
501: KEVEQARMRL NKWEDKKKPL LAED
001: MNSESLENLH RPLIESSKSF VDYRLETVLT DRELPYFRRI YLAMMIEMKF LFHLAAPAIF VYVINNGMSI LTRIFAGHVG SFELAAASLG NSGFNMFTYG
101: LLLGMGSAVE TLCGQAHGAH RYEMLGVYLQ RSTVVLILTC LPMSFLFLFS NPILTALGEP EQVATLASVF VYGMIPVIFA YAVNFPIQKF LQSQSIVTPS
201: AYISAATLVI HLILSWIAVY RLGYGLLALS LIHSFSWWII VVAQIVYIKM SPRCRRTWEG FSWKAFEGLW DFFRLSAASA VMLCLESWYS QILVLLAGLL
301: KNPELALDSL AICMSISAIS FMVSVGFNAA ASVRVSNELG AGNPRAAAFS TVVTTGVSFL LSVFEAIVVL SWRHVISYAF TDSPAVAEAV ADLSPFLAIT
401: IVLNGIQPVL SGVAVGCGWQ AFVAYVNIGC YYVVGIPVGF VLGFTYDMGA KGIWTGMIGG TLMQTIILVI VTLRTDWDKE VEKASSRLDQ WEESREPLLK
501: Q
101: LLLGMGSAVE TLCGQAHGAH RYEMLGVYLQ RSTVVLILTC LPMSFLFLFS NPILTALGEP EQVATLASVF VYGMIPVIFA YAVNFPIQKF LQSQSIVTPS
201: AYISAATLVI HLILSWIAVY RLGYGLLALS LIHSFSWWII VVAQIVYIKM SPRCRRTWEG FSWKAFEGLW DFFRLSAASA VMLCLESWYS QILVLLAGLL
301: KNPELALDSL AICMSISAIS FMVSVGFNAA ASVRVSNELG AGNPRAAAFS TVVTTGVSFL LSVFEAIVVL SWRHVISYAF TDSPAVAEAV ADLSPFLAIT
401: IVLNGIQPVL SGVAVGCGWQ AFVAYVNIGC YYVVGIPVGF VLGFTYDMGA KGIWTGMIGG TLMQTIILVI VTLRTDWDKE VEKASSRLDQ WEESREPLLK
501: Q
Arabidopsis Description
DTX37Protein DETOXIFICATION 37 [Source:UniProtKB/Swiss-Prot;Acc:O80695]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.