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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d030250_P001 Maize peroxisome 85.98 86.97
KXG38740 Sorghum plasma membrane 71.4 74.07
HORVU3Hr1G014320.2 Barley plasma membrane 62.31 67.42
Os10t0195000-01 Rice golgi, mitochondrion, plasma membrane, vacuole 58.14 66.16
TraesCS3B01G039300.1 Wheat plasma membrane 61.93 65.79
TraesCS3D01G036400.1 Wheat plasma membrane 61.93 65.27
TraesCS3A01G044500.1 Wheat plasma membrane 61.55 64.87
EER91211 Sorghum plasma membrane 54.36 58.22
OQU87609 Sorghum plasma membrane 42.61 55.01
GSMUA_Achr9P26370_001 Banana plasma membrane 47.35 53.65
GSMUA_Achr5P01870_001 Banana plasma membrane 46.59 52.12
Solyc01g109320.2.1 Tomato peroxisome 44.51 47.28
VIT_18s0001g11760.t01 Wine grape plasma membrane 41.86 46.14
Solyc10g051130.1.1 Tomato plasma membrane 41.48 45.82
PGSC0003DMT400021339 Potato peroxisome, plasma membrane, vacuole 41.48 45.82
Solyc01g109310.2.1 Tomato plasma membrane 40.15 44.54
PGSC0003DMT400064838 Potato plasma membrane 39.58 43.91
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 40.15 43.8
CDY06731 Canola cytosol, peroxisome, plasma membrane 40.15 43.8
EES15223 Sorghum plasma membrane 42.05 43.7
CDY17070 Canola cytosol, peroxisome, plasma membrane 39.96 43.59
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 42.23 43.55
AT1G47530.1 Thale cress cytosol, peroxisome, plasma membrane 39.77 43.39
KRH05771 Soybean cytosol, plasma membrane, vacuole 39.58 43.27
OQU85978 Sorghum plasma membrane 33.9 43.13
KRH15267 Soybean cytosol, plasma membrane, vacuole 39.39 43.06
EER91321 Sorghum plasma membrane 37.88 39.92
OQU85979 Sorghum cytosol, peroxisome, vacuole 38.26 39.84
EER91319 Sorghum cytosol, peroxisome, plasma membrane 37.31 39.16
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 36.36 38.79
KXG38133 Sorghum cytosol, peroxisome, vacuole 37.88 38.76
EER96893 Sorghum cytosol, peroxisome, vacuole 34.85 38.57
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 35.8 38.1
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 36.17 37.82
KXG37120 Sorghum plasma membrane 36.17 37.82
KXG35815 Sorghum plasma membrane 34.09 37.34
OQU80697 Sorghum cytosol 37.5 37.22
EER96891 Sorghum cytosol, peroxisome, plasma membrane 33.14 36.01
EES15585 Sorghum cytosol, peroxisome, plasma membrane 35.8 36.0
EES09180 Sorghum cytosol, peroxisome, plasma membrane 35.61 35.54
EER93896 Sorghum cytosol, peroxisome, plasma membrane 35.23 35.5
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 35.04 35.24
OQU79625 Sorghum golgi, plasma membrane, vacuole 33.33 34.44
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1B6QLD6GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085ProteinID:KXG38741.1InterPro:MATE_famEnsemblPlants:OQU92001ProteinID:OQU92001ProteinID:OQU92001.1
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF174EnsemblPlantsGene:SORBI_3001G273100TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI00081AE62ESEG:seg::::
Description
hypothetical protein
Coordinates
chr1:-:52799290..52803324
Molecular Weight (calculated)
56943.0 Da
IEP (calculated)
7.984
GRAVY (calculated)
0.522
Length
528 amino acids
Sequence
(BLAST)
001: MTSSSGSSSR RLEQHEAEKP AHPHGLDALT MKMLVRRSWE ESRLLLRLAF PALLTEVFQF SIGFVTTAFV GHLGEVELAA VSVVENILDS SAYGVLYGMG
101: SALETLSGQA VGAGQPEKLG VYTQQSWIIS VATAVALAPA YVLAAPLLHR SLHQPGAVSR AAGPYARWAV PRLLAHALNI PLLMFFQAQS RIWAVAAISG
201: AALCAHAVLT YVAVARLGYG LPGAAVAGDV SHWLVVAAQF AYMTTGERFP DAWNGFTVRA FSNLGAFVKL SLGSAVMICL EFWYYTTLLI LVGLLPQAKL
301: QIDIMSVCLN FEFMTIMVAL GFSTAIGVRV SNELGANRPK ETKFAVLVAV STSIFMGAIF MGVVLIWRTS LPKLFSDSEE VIHGASKLGH LLALTVCMSS
401: IWPILSGVAV GAGWQVPVAF INVGCYYLVG IPMGILFGFK LKHGTMGIWI GMLTGTFLQM SILLAIIFTT KWDKQAALAE VRMAEWGGKN ENLPLMETTH
501: TADNHMAPAQ EKILAHDSQK NVELVRTD
Best Arabidopsis Sequence Match ( AT1G12950.1 )
(BLAST)
001: MEKDNDFKDP FLASTEEEEL DPATQKALME YLGVGSRASS LVSFSSTAVD IPPISGVGDF VREFRIESRK LWKLAGPAIF TTMSQYSLGA VTQVFAGHIS
101: TLALAAVSIE NSVIAGFSFG IMLGMGSALE TLCGQAFGAG KVSMLGVYLQ RSWVILSVTA LFLSLIYIFA APILTFIGQT AAISAMAGIF SIYMIPQIFA
201: YAINFPTAKF LQSQSKIMVM AGISGVVLVI HSFFTWLVMS RLHWGLPGLA LVLNTSWWVI VVAQLVYIFN CTCGEAWSGF TWEAFHNLWG FVKLSLASAA
301: MLCLEIWYFM ALVLFAGYLK NAEVSVAALS ICMNILGWAA MVAFGTNAAV SVRVSNELGA SHPRTAKFSL VVAVILSTAI GMFIAAGLLF FRNEYPVLFV
401: EDEEVRNVVR ELTPMLAFCI VINNVQPVLS GVAVGAGWQA VVAYVNIACY YLFGVPFGLL LGFKLEYGVM GIWWGMVTGT FVQSIVLTWM ICKTNWEKEA
501: SMAEERIKEW GGVPAEKETL LN
Arabidopsis Description
DTX31Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WCP4]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.