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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d012663_P001 Maize mitochondrion 92.67 74.17
TraesCS7D01G014200.1 Wheat golgi, nucleus, plasma membrane 81.17 69.75
TraesCS3B01G336100.1 Wheat golgi, nucleus, plasma membrane 80.93 69.54
TraesCS3D01G301400.1 Wheat golgi, nucleus, plasma membrane 80.44 69.41
TraesCS3A01G300400.1 Wheat golgi, nucleus, plasma membrane 80.2 68.62
HORVU3Hr1G074290.9 Barley nucleus, peroxisome, plasma membrane 78.73 64.53
Os01t0766000-00 Rice mitochondrion 82.15 61.54
GSMUA_Achr5P01870_001 Banana plasma membrane 66.26 57.42
EER91211 Sorghum plasma membrane 68.22 56.59
GSMUA_Achr9P26370_001 Banana plasma membrane 62.84 55.15
Solyc10g051130.1.1 Tomato plasma membrane 59.17 50.63
PGSC0003DMT400021339 Potato peroxisome, plasma membrane, vacuole 58.44 50.0
Solyc01g109320.2.1 Tomato peroxisome 57.7 47.48
VIT_18s0001g11760.t01 Wine grape plasma membrane 55.26 47.18
KRH05771 Soybean cytosol, plasma membrane, vacuole 55.01 46.58
OQU85978 Sorghum plasma membrane 46.94 46.27
Solyc01g109310.2.1 Tomato plasma membrane 52.81 45.38
PGSC0003DMT400064838 Potato plasma membrane 52.57 45.17
KRH15267 Soybean cytosol, plasma membrane, vacuole 53.3 45.13
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 52.32 44.21
CDY06731 Canola cytosol, peroxisome, plasma membrane 52.32 44.21
CDY17070 Canola cytosol, peroxisome, plasma membrane 52.08 44.01
AT1G47530.1 Thale cress cytosol, peroxisome, plasma membrane 51.59 43.59
OQU92001 Sorghum peroxisome 55.01 42.61
EES15223 Sorghum plasma membrane 51.59 41.54
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 51.59 41.21
KXG38740 Sorghum plasma membrane 51.1 41.06
OQU85979 Sorghum cytosol, peroxisome, vacuole 50.86 41.03
EER91319 Sorghum cytosol, peroxisome, plasma membrane 49.63 40.36
EER91321 Sorghum plasma membrane 48.9 39.92
KXG38133 Sorghum cytosol, peroxisome, vacuole 49.39 39.15
KXG37120 Sorghum plasma membrane 47.92 38.81
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 45.72 37.7
EER93896 Sorghum cytosol, peroxisome, plasma membrane 47.68 37.21
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 44.99 37.17
EER96893 Sorghum cytosol, peroxisome, vacuole 42.3 36.27
KXG35815 Sorghum plasma membrane 41.81 35.48
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 43.77 35.45
EES15585 Sorghum cytosol, peroxisome, plasma membrane 45.48 35.43
OQU80697 Sorghum cytosol 45.97 35.34
EER96891 Sorghum cytosol, peroxisome, plasma membrane 41.56 34.98
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 44.74 34.86
OQU79625 Sorghum golgi, plasma membrane, vacuole 42.3 33.86
EES09180 Sorghum cytosol, peroxisome, plasma membrane 43.77 33.84
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1W0VZQ6GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famEnsemblPlants:OQU87609ProteinID:OQU87609ProteinID:OQU87609.1PFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF256EnsemblPlantsGene:SORBI_3003G307600TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0009DC9086
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:-:63644246..63646771
Molecular Weight (calculated)
44069.7 Da
IEP (calculated)
10.033
GRAVY (calculated)
0.727
Length
409 amino acids
Sequence
(BLAST)
001: MGSALETLCG QAVGAGQLQM LGVYMQRSWI ICVATSLVLL PLYVFTSPIL RLLRQSADIS AVSGRYARWC VPQLFAYAVN FPMQKFYQAQ SRVWVMTAIS
101: GAVLAVHALL NWLVVSRLGR GLVGAAVVGD VSWWLVNVAQ FVYLVGGSFP GAWTGFSRKA FASLGGFVRL SIASAVMLCL EMWYYTAVLI LVGCLKNPEI
201: QVDAISICMN YQLWTLMVAV GFNAAVSVRV SNELGANHPK AAKFSVVVAT ATSAVIGVIF TAVALAARKQ MPRLFTGDDV VLRATAKLGY LLAATIFLNS
301: IQPVLSGVAI GAGWQSLVAF VNIGSYYLVG LPLAAVFGFK LKLNATGIWV GVLIGTVLQT VILFVILSRT KWQKEAMLAE ERIRVWGGNV ELPQTQETRP
401: SENTAATVS
Best Arabidopsis Sequence Match ( AT1G47530.2 )
(BLAST)
001: MGSALETLCG QAYGAGQIRM MGIYMQRSWV ILFTTALFLL PVYIWAPPIL SFFGEAPHIS KAAGKFALWM IPQLFAYAAN FPIQKFLQSQ RKVLVMAWIS
101: GVVLVIHAVF SWLFILYFKW GLVGAAITLN TSWWLIVIGQ LLYILITKSD GAWTGFSMLA FRDLYGFVKL SLASALMLCL EFWYLMVLVV VTGLLPNPLI
201: PVDAISICMN IEGWTAMISI GFNAAISVRV SNELGAGNAA LAKFSVIVVS ITSTLIGIVC MIVVLATKDS FPYLFTSSEA VAAETTRIAV LLGFTVLLNS
301: LQPVLSGVAV GAGWQALVAY VNIACYYIIG LPAGLVLGFT LDLGVQGIWG GMVAGICLQT LILIGIIYFT NWNKEAEQAE SRVQRWGGTA QE
Arabidopsis Description
DTX33Protein DETOXIFICATION 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX83]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.