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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027982_P002 Maize cytosol, peroxisome, plasma membrane 83.24 89.92
TraesCS4B01G304300.1 Wheat cytosol, peroxisome, plasma membrane 81.71 86.67
TraesCS4A01G404500.1 Wheat cytosol, peroxisome, plasma membrane 81.52 86.46
TraesCS4D01G302500.1 Wheat cytosol, peroxisome, plasma membrane 81.52 86.46
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 80.76 85.83
GSMUA_Achr7P11770_001 Banana plasma membrane 64.57 79.02
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 71.81 74.65
GSMUA_Achr8P18130_001 Banana mitochondrion, plasma membrane, vacuole 69.33 74.59
GSMUA_Achr3P21260_001 Banana plasma membrane 65.33 74.57
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 25.14 71.74
AT5G65380.1 Thale cress cytosol, peroxisome, plasma membrane 61.9 66.87
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 60.19 66.81
Bra024381.1-P Field mustard plasma membrane 60.95 66.12
KRH74515 Soybean cytosol, peroxisome, plasma membrane 61.71 65.99
CDX81281 Canola plasma membrane 60.0 65.08
Bra037814.1-P Field mustard plasma membrane 59.81 65.01
VIT_18s0001g06790.t01 Wine grape plasma membrane 60.0 64.29
CDY33962 Canola plasma membrane 38.67 63.44
Bra006059.1-P Field mustard plasma membrane 57.9 62.42
CDX78379 Canola peroxisome, plasma membrane, vacuole 54.86 62.34
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 58.48 62.27
CDX85764 Canola plasma membrane 59.05 62.0
CDY40093 Canola plasma membrane 59.24 61.95
CDX81176 Canola plasma membrane 57.52 61.89
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 58.1 61.87
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 56.76 61.83
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 58.29 61.82
CDX97005 Canola plasma membrane 57.14 61.6
KRH62283 Soybean cytosol, peroxisome, plasma membrane 58.86 61.43
CDX69835 Canola plasma membrane 56.95 61.4
CDY70471 Canola cytosol, peroxisome, plasma membrane 35.43 61.39
CDY08798 Canola cytosol, peroxisome, plasma membrane 37.52 61.37
CDX97001 Canola plasma membrane 57.33 61.3
CDX81172 Canola plasma membrane 56.57 61.24
CDX78378 Canola plasma membrane 56.57 61.24
CDY14558 Canola plasma membrane 37.52 61.18
VIT_18s0001g06820.t01 Wine grape plasma membrane 56.19 60.95
CDX69834 Canola plasma membrane 55.05 60.71
PGSC0003DMT400005437 Potato cytosol, peroxisome, plasma membrane 57.52 60.52
CDY40095 Canola plasma membrane 55.81 60.16
AT5G10420.1 Thale cress plasma membrane 55.81 59.92
AT5G44050.1 Thale cress plasma membrane 56.0 59.88
Bra009034.1-P Field mustard plasma membrane 48.76 59.67
CDY08796 Canola plasma membrane 60.95 59.04
KXG35815 Sorghum plasma membrane 53.9 58.71
CDY61495 Canola plasma membrane 60.76 58.53
EER96893 Sorghum cytosol, peroxisome, vacuole 52.19 57.44
Solyc04g074840.2.1 Tomato plasma membrane 54.29 56.66
CDY08797 Canola plasma membrane 60.76 56.46
EER96891 Sorghum cytosol, peroxisome, plasma membrane 52.19 56.38
CDX81174 Canola plasma membrane 43.43 56.16
CDY54720 Canola plasma membrane 60.0 56.05
Bra006058.1-P Field mustard plasma membrane 56.0 55.89
Bra024379.1-P Field mustard plasma membrane 58.48 54.05
Bra028589.1-P Field mustard peroxisome 41.71 52.77
KRH62279 Soybean cytosol, peroxisome, plasma membrane 52.57 52.67
PGSC0003DMT400005432 Potato plasma membrane 47.05 52.11
EES15585 Sorghum cytosol, peroxisome, plasma membrane 47.43 47.43
EES09180 Sorghum cytosol, peroxisome, plasma membrane 46.67 46.31
OQU87609 Sorghum plasma membrane 34.86 44.74
OQU85979 Sorghum cytosol, peroxisome, vacuole 43.05 44.58
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 43.05 44.14
EER91319 Sorghum cytosol, peroxisome, plasma membrane 42.29 44.14
EER91321 Sorghum plasma membrane 41.9 43.91
EES15223 Sorghum plasma membrane 42.48 43.9
KXG38133 Sorghum cytosol, peroxisome, vacuole 42.29 43.02
Solyc04g074860.2.1 Tomato plasma membrane 45.71 42.18
OQU85978 Sorghum plasma membrane 33.33 42.17
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 39.81 42.14
EER93896 Sorghum cytosol, peroxisome, plasma membrane 41.9 41.98
KXG37120 Sorghum plasma membrane 40.38 41.98
EER91211 Sorghum plasma membrane 37.33 39.76
OQU80697 Sorghum cytosol 39.81 39.29
OQU79625 Sorghum golgi, plasma membrane, vacuole 37.14 38.16
OQU92001 Sorghum peroxisome 35.24 35.04
KXG38740 Sorghum plasma membrane 33.33 34.38
CDX69836 Canola plasma membrane 56.38 28.85
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1Z5SAZ8GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famEnsemblPlants:OQU93093ProteinID:OQU93093ProteinID:OQU93093.1PFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF80EnsemblPlantsGene:SORBI_3001G476700TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0001A82E10
RefSeq:XP_002468362.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:-:74931933..74940132
Molecular Weight (calculated)
57080.4 Da
IEP (calculated)
5.645
GRAVY (calculated)
0.698
Length
525 amino acids
Sequence
(BLAST)
001: MASTAERADE EEEACRVALL DAGVKKEEWQ VVVGGGGDGD GGNNKQQLAA RVWEESRKLW DIVAPAIFSR VVTYSMNVIT QAFAGHLGDL ELAAISIANT
101: VVVGFSFGLM GHDSPVAAWI CLVPQLLPRR RIWLGMASAL ETLCGQAFGA KKFHMMGVYM QRSWIVLFLC AVLLLPMYFF AEDVLLLTGQ SPELSAMAGK
201: VSVWFIPLHF SFAFLFPLQR FLQCQMKNFA NAAASAVALV IHIFVSWLFV SRFQFGLAGI ALTLNFSWWA TGAMLFAYVS CGGCPDTWHG FSLEAFAGMW
301: EFVKLSSASG VMLCLENWYY RILVLLTGNL KDAAIAVDAL SICMTINGWE MMIPLAFFAG TGVRVANELG AGNGKGARFA TIVSSITSLV IGLFFWVLIM
401: GLHDKFALIF TSSSVVLDAV DNLSVLLAFT ILLNSIQPVL SGVAVGSGWQ SMVAYVNIGS YYLIGIPLGI LLGWLFNLGV LGIWAGMIGG TAVQTLILAI
501: MTVRCDWEKE AMVASTRMDN MSEVR
Best Arabidopsis Sequence Match ( AT5G65380.1 )
(BLAST)
001: MRGGDGEEGS ESRVALLKSP HTAEEDGEGL KDRILVETKK LWQIVGPAIF SRVTTYSMLV ITQAFAGHLG DLELAAISIV NNVTVGFNFG LLLGMASALE
101: TLCGQAFGAK KYHMLGVYMQ RSWIVLFFCC VLLLPTYIFT TPVLKFLGQP DDIAELSGVV AIWVIPLHFA FTLSFPLQRF LQCQLKNRVT AYAAAVALVV
201: HILVCWLFVD GLKLGVVGTV ATISISWWVN VLILLVYSTC GGCPLTWTGL SSEALTGLWE FLKLSASSGV MLCLENWYYR ILIIMTGNLQ NARIAVDSLS
301: ICMAINGWEM MIPLAFFAGT GVRVANELGA GNGKGARFAT IVSVTQSLII GLFFWVLIML LHNQIAWIFS SSVAVLDAVN KLSLLLAFTV LLNSVQPVLS
401: GVAVGSGWQS YVAYINLGCY YCIGVPLGFL MGWGFKLGVM GIWGGMIFGG TAVQTMILSF ITMRCDWEKE AQKASARINK WSNTIK
Arabidopsis Description
DTX27Protein DETOXIFICATION 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.