Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 3
- mitochondrion 1
- cytosol 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G21690.1 | EES02290 | AT3G16310.1 | 21798944 |
| AT3G21690.1 | EES19830 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033062_P001 | Maize | cytosol, plasma membrane, plastid | 89.15 | 89.67 |
| Os03t0571900-01 | Rice | plasma membrane | 85.27 | 84.62 |
| TraesCS5D01G332300.1 | Wheat | cytosol, peroxisome, plasma membrane | 82.95 | 84.09 |
| TraesCS5B01G326600.1 | Wheat | cytosol, peroxisome, plasma membrane | 83.33 | 83.98 |
| HORVU5Hr1G082890.5 | Barley | cytosol, peroxisome, plasma membrane | 81.98 | 83.27 |
| TraesCS1D01G030400.1 | Wheat | cytosol, peroxisome, plasma membrane | 75.78 | 76.37 |
| TraesCS1B01G037000.1 | Wheat | cytosol, peroxisome, vacuole | 75.39 | 75.83 |
| TraesCS1A01G029900.1 | Wheat | cytosol, peroxisome, plasma membrane | 74.81 | 75.24 |
| EER91319 | Sorghum | cytosol, peroxisome, plasma membrane | 73.26 | 75.15 |
| EER91321 | Sorghum | plasma membrane | 72.09 | 74.25 |
| Bra001840.1-P | Field mustard | plasma membrane | 64.92 | 73.3 |
| CDY33131 | Canola | golgi, plasma membrane, vacuole | 25.0 | 73.3 |
| KRH26788 | Soybean | plasma membrane | 71.51 | 73.21 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 71.71 | 73.12 |
| CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 44.38 | 72.24 |
| KXG37120 | Sorghum | plasma membrane | 70.54 | 72.08 |
| CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 70.54 | 72.08 |
| Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 70.54 | 72.08 |
| CDX92916 | Canola | cytosol, plasma membrane, vacuole | 70.35 | 71.88 |
| CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 43.99 | 71.61 |
| Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 69.77 | 71.57 |
| Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 69.19 | 71.54 |
| EER93896 | Sorghum | cytosol, peroxisome, plasma membrane | 72.29 | 71.18 |
| VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 69.77 | 71.01 |
| CDY38631 | Canola | cytosol, peroxisome, vacuole | 70.16 | 70.7 |
| VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 69.38 | 70.61 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 66.09 | 70.45 |
| CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 69.96 | 70.23 |
| Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 66.28 | 70.23 |
| KRH56125 | Soybean | plasma membrane | 70.35 | 70.21 |
| CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 69.77 | 70.04 |
| TraesCS5A01G326300.4 | Wheat | cytosol, plasma membrane, vacuole | 77.33 | 70.0 |
| CDY33130 | Canola | cytosol, peroxisome, vacuole | 41.67 | 69.81 |
| CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 66.86 | 69.7 |
| TraesCS3B01G485100.1 | Wheat | plasma membrane | 74.22 | 69.51 |
| CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 67.64 | 69.38 |
| TraesCS5A01G326700.1 | Wheat | cytosol, peroxisome, plasma membrane | 68.41 | 69.22 |
| Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.89 | 68.0 |
| Solyc12g005850.1.1 | Tomato | plasma membrane | 67.44 | 67.97 |
| VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 67.83 | 67.96 |
| CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 39.92 | 67.76 |
| EER97294 | Sorghum | endoplasmic reticulum, peroxisome, plasma membrane | 64.53 | 67.14 |
| KRH25385 | Soybean | plasma membrane | 56.78 | 66.44 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 62.79 | 61.83 |
| VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 65.89 | 49.42 |
| OQU87609 | Sorghum | plasma membrane | 39.15 | 49.39 |
| OQU79625 | Sorghum | golgi, plasma membrane, vacuole | 44.57 | 45.01 |
| OQU80740 | Sorghum | cytosol, peroxisome, plasma membrane | 44.19 | 44.53 |
| EES15223 | Sorghum | plasma membrane | 43.8 | 44.49 |
| EER96893 | Sorghum | cytosol, peroxisome, vacuole | 40.7 | 44.03 |
| KXG25339 | Sorghum | cytosol, peroxisome, plasma membrane | 41.67 | 43.43 |
| EER91211 | Sorghum | plasma membrane | 41.47 | 43.41 |
| KXG35815 | Sorghum | plasma membrane | 40.31 | 43.15 |
| OQU85978 | Sorghum | plasma membrane | 34.69 | 43.13 |
| EER96891 | Sorghum | cytosol, peroxisome, plasma membrane | 40.5 | 43.0 |
| OQU86679 | Sorghum | cytosol, peroxisome, plasma membrane | 42.05 | 42.97 |
| OQU85979 | Sorghum | cytosol, peroxisome, vacuole | 42.05 | 42.8 |
| OQU93093 | Sorghum | cytosol, peroxisome, plasma membrane | 43.02 | 42.29 |
| OQU80697 | Sorghum | cytosol | 42.44 | 41.17 |
| EES15585 | Sorghum | cytosol, peroxisome, plasma membrane | 41.67 | 40.95 |
| EES09180 | Sorghum | cytosol, peroxisome, plasma membrane | 40.89 | 39.89 |
| OQU92001 | Sorghum | peroxisome | 38.76 | 37.88 |
| KXG38740 | Sorghum | plasma membrane | 36.05 | 36.54 |
Protein Annotations
| MapMan:24.2.4.1.1 | UniProt:A0A1B6QJN4 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlants:KXG38133 | ProteinID:KXG38133 | ProteinID:KXG38133.1 | InterPro:MATE_fam | PFAM:PF01554 |
| PANTHER:PTHR11206 | PANTHER:PTHR11206:SF200 | EnsemblPlantsGene:SORBI_3001G185500 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI0001C80D95 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:15866855..15872166
Molecular Weight (calculated)
55040.0 Da
IEP (calculated)
7.353
GRAVY (calculated)
0.754
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MGESKLESPL LGLSAAASGG PSPGSGHGHG GEAASGQLES ILSDTSLPWG RRMAAASVVE MRLLVRLAAP AVLVYMINYL MSMSTQIFSG HLGTLELAAA
101: SLGNTGIQVF AYGLMLGMGS AVETLCGQAY GAHKYDMLGI YLQRSTILLM ATGVPLAVIY AFSRPILVLL GESPAIASAA AVFVYGLIPQ IFAYAANFPI
201: QKFMQAQSIM APSAYISAAT LAVHVALSYL AVYRWGMGLL GASLILSLSW WVIVVAQFVY IVTSERCRLT WTGFSWEAFS GLPSFFKLSV ASAVMLCLET
301: WYFQILVLIA GLLKDPELAL SSLSVCMTIT GWVFMISVGF NAAASVRVSN ELGAGNPKAA SFSVVVVTLL SFVLSVLISI VILLCRDYIS YIFTEGEDVS
401: RAVSKLTPLL AVTLILNGIQ PVLSGVAVGC GWQAFVAYVN VGCYYIVGIP LGCLLGFYFD LGAAGIWSGM IGGTFMQTLI LVWVTYRTNW TKEVQEAQKR
501: LNKWNDGKAP LLSAQE
101: SLGNTGIQVF AYGLMLGMGS AVETLCGQAY GAHKYDMLGI YLQRSTILLM ATGVPLAVIY AFSRPILVLL GESPAIASAA AVFVYGLIPQ IFAYAANFPI
201: QKFMQAQSIM APSAYISAAT LAVHVALSYL AVYRWGMGLL GASLILSLSW WVIVVAQFVY IVTSERCRLT WTGFSWEAFS GLPSFFKLSV ASAVMLCLET
301: WYFQILVLIA GLLKDPELAL SSLSVCMTIT GWVFMISVGF NAAASVRVSN ELGAGNPKAA SFSVVVVTLL SFVLSVLISI VILLCRDYIS YIFTEGEDVS
401: RAVSKLTPLL AVTLILNGIQ PVLSGVAVGC GWQAFVAYVN VGCYYIVGIP LGCLLGFYFD LGAAGIWSGM IGGTFMQTLI LVWVTYRTNW TKEVQEAQKR
501: LNKWNDGKAP LLSAQE
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.