Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT3G21690.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT3G21690.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT3G21690.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT3G21690.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT3G21690.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT3G21690.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT3G21690.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 98.82 98.24
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 95.68 95.87
Os03t0571900-01 Rice plasma membrane 85.46 83.65
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 84.28 83.63
KXG38133 Sorghum cytosol, peroxisome, vacuole 84.09 82.95
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 91.16 81.4
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 81.73 81.25
CDY33131 Canola golgi, plasma membrane, vacuole 25.54 73.86
TraesCS3D01G506100.1 Wheat plasma membrane 72.1 73.69
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 70.92 73.37
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 71.32 72.75
Bra001840.1-P Field mustard plasma membrane 65.03 72.43
KRH26788 Soybean plasma membrane 71.51 72.22
KRH56125 Soybean plasma membrane 73.28 72.15
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 70.33 71.89
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 70.33 71.17
CDX92916 Canola cytosol, plasma membrane, vacuole 70.53 71.09
CDY69153 Canola cytosol, peroxisome, plasma membrane 44.2 70.98
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 70.33 70.75
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 69.35 70.74
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 70.14 70.69
CDY24250 Canola cytosol, peroxisome, plasma membrane 43.81 70.35
CDY33129 Canola cytosol, peroxisome, plasma membrane 69.74 70.3
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 66.99 70.02
CDY38631 Canola cytosol, peroxisome, vacuole 70.33 69.92
CDY39494 Canola cytosol, peroxisome, plasma membrane 70.53 69.84
CDY19294 Canola cytosol, peroxisome, plasma membrane 70.33 69.65
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 66.21 69.63
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 69.35 69.63
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 68.96 69.23
Solyc12g005850.1.1 Tomato plasma membrane 69.16 68.75
CDY33130 Canola cytosol, peroxisome, vacuole 41.45 68.51
CDY65669 Canola cytosol, peroxisome, plasma membrane 66.6 68.48
KRH25385 Soybean plasma membrane 59.33 68.48
CDY39493 Canola cytosol, peroxisome, plasma membrane 67.58 68.39
VIT_12s0059g02160.t01 Wine grape plasma membrane 68.57 67.77
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 65.42 66.6
CDY19295 Canola cytosol, peroxisome, plasma membrane 39.69 66.45
TraesCS2D01G228200.1 Wheat plasma membrane 63.65 65.72
PGSC0003DMT400022543 Potato plasma membrane 65.42 63.55
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 65.62 48.55
TraesCS5D01G254500.1 Wheat mitochondrion, plasma membrane 27.5 45.31
TraesCS3D01G301400.1 Wheat golgi, nucleus, plasma membrane 42.04 45.15
TraesCS7D01G240600.1 Wheat plasma membrane 42.24 44.89
TraesCS4D01G068800.1 Wheat plasma membrane 41.85 44.84
TraesCS7D01G130700.1 Wheat plasma membrane 41.85 44.75
TraesCS7D01G014200.1 Wheat golgi, nucleus, plasma membrane 41.85 44.75
TraesCS7D01G129700.1 Wheat plasma membrane 41.85 44.28
TraesCS7D01G469000.1 Wheat plasma membrane 41.26 44.03
TraesCS7D01G384100.1 Wheat golgi, plasma membrane, vacuole 41.06 44.0
TraesCS4D01G302500.1 Wheat cytosol, peroxisome, plasma membrane 42.63 43.84
TraesCS7D01G130800.1 Wheat plasma membrane 40.86 43.7
TraesCS4D01G068900.1 Wheat plasma membrane 40.27 43.34
TraesCS7D01G272900.1 Wheat plasma membrane 42.63 43.14
TraesCS5D01G360400.1 Wheat peroxisome, plasma membrane, vacuole 42.44 42.94
TraesCS5D01G041700.1 Wheat plasma membrane 42.24 42.91
TraesCS5D01G254400.1 Wheat plasma membrane 39.69 42.89
TraesCS6D01G384300.1 Wheat plasma membrane 41.45 41.62
TraesCS4D01G123800.1 Wheat plasma membrane 40.47 41.37
TraesCS5D01G150100.1 Wheat cytosol, peroxisome, plasma membrane 40.86 41.19
TraesCS5D01G355500.1 Wheat plasma membrane 39.49 40.12
TraesCS3D01G036400.1 Wheat plasma membrane 39.1 39.72
TraesCS6D01G384400.1 Wheat plastid 41.65 38.06
Protein Annotations
MapMan:24.2.4.1.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0055085
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF200TIGRFAMs:TIGR00797TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5D01G332300EnsemblPlants:TraesCS5D01G332300.1TIGR:cd13132SEG:seg::
Description
No Description!
Coordinates
chr5D:+:423263127..423267914
Molecular Weight (calculated)
54658.9 Da
IEP (calculated)
6.737
GRAVY (calculated)
0.773
Length
509 amino acids
Sequence
(BLAST)
001: MAADSKLQSP LLPPPAGSEG EEGHGEASKR LESILSDESV PWARRMCAAT AVEMRMLVRL AAPAVLVYMI NYLMSMSTQI FSGHLGTLEL AAASLGNTGI
101: QVFAYGLMLG MGSAVETLCG QAYGANKFDM LGIYMQRSTV LLMATGIPLA VLYAFSRPIL ILLGESPEIA SAAAIFVYGL IPQIFAYAAN FPIQKFMQAQ
201: SIMAPSAYIS TATLAVHLVL SYLVVYKFGL GLLGASLMLS VSWWIIVIGQ FIYIVTSSRC RLTWTGFSVQ AFSGLPEFFK LSLASAIMLC LETWYFQILV
301: LIAGLLKDPE MALASLSVCM TISGWVFMIS VGFNAAASVR VSNELGAGNP KSAAFSVVVV TVLSFILAAI ISIVILFFRD YISYIYTGGD DVAAAVSKLT
401: PLLALTLILN GIQPVLSGVA VGCGWQAFVA YVNVGCYYVV GIPLGCLLGF YFDLGAAGIW SGMIGGTFMQ TVILVWVTVR TDWNKEVAEA RKRLNKWEGN
501: KMPLLAGQE
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.