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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX97739
CDY30157

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 CDX97739 AT3G16310.1 21798944
AT3G21690.1 CDY30157 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY33130 Canola cytosol, peroxisome, vacuole 86.84 85.71
CDY69153 Canola cytosol, peroxisome, plasma membrane 88.49 84.86
CDY24250 Canola cytosol, peroxisome, plasma membrane 87.5 83.91
CDY19294 Canola cytosol, peroxisome, plasma membrane 94.41 55.84
CDY39494 Canola cytosol, peroxisome, plasma membrane 94.41 55.84
CDY38631 Canola cytosol, peroxisome, vacuole 90.79 53.91
CDY33129 Canola cytosol, peroxisome, plasma membrane 88.49 53.27
CDX92916 Canola cytosol, plasma membrane, vacuole 86.84 52.28
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 86.51 51.98
CDY65669 Canola cytosol, peroxisome, plasma membrane 84.21 51.72
CDY39493 Canola cytosol, peroxisome, plasma membrane 84.87 51.29
KRH25385 Soybean plasma membrane 73.03 50.34
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 71.05 44.63
GSMUA_Achr6P00360_001 Banana vacuole 58.22 43.49
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 71.38 42.8
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 70.72 42.74
KRH56125 Soybean plasma membrane 72.37 42.55
KRH26788 Soybean plasma membrane 70.39 42.46
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 70.72 42.41
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 71.71 41.84
Solyc12g005850.1.1 Tomato plasma membrane 70.39 41.8
PGSC0003DMT400022543 Potato plasma membrane 71.05 41.22
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 66.45 40.64
Zm00001d013809_P002 Maize plasma membrane 66.45 40.64
VIT_12s0059g02160.t01 Wine grape plasma membrane 68.75 40.58
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 66.45 40.56
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 66.12 40.52
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 66.45 40.48
KXG37120 Sorghum plasma membrane 67.11 40.4
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 66.12 40.28
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 65.13 40.24
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 65.13 40.24
EER91319 Sorghum cytosol, peroxisome, plasma membrane 66.45 40.16
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 65.46 40.04
KXG38133 Sorghum cytosol, peroxisome, vacuole 67.76 39.92
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 65.13 39.84
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 64.47 39.76
EER91321 Sorghum plasma membrane 65.46 39.72
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 65.46 39.72
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 66.45 39.69
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 65.13 39.68
Os03t0572900-01 Rice plasma membrane 65.13 39.6
Zm00001d033063_P001 Maize vacuole 65.13 39.6
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 66.78 39.57
TraesCS3D01G506100.1 Wheat plasma membrane 64.8 39.56
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 64.8 39.48
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 66.45 39.45
Os03t0571900-01 Rice plasma membrane 67.43 39.42
TraesCSU01G124400.1 Wheat plasma membrane, plastid 64.47 39.2
GSMUA_Achr9P11610_001 Banana plasma membrane 63.82 39.19
TraesCS3A01G499200.1 Wheat plasma membrane 64.14 39.16
TraesCS3B01G562400.2 Wheat plasma membrane 64.14 39.16
TraesCS4B01G388800.1 Wheat plasma membrane 64.14 39.08
TraesCS5A01G553200.1 Wheat plasma membrane 63.82 38.88
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 64.47 38.74
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 63.49 38.6
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 65.46 38.57
EER93896 Sorghum cytosol, peroxisome, plasma membrane 66.45 38.55
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 65.13 38.52
Zm00001d021629_P003 Maize plasma membrane 64.8 38.4
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 64.14 38.39
GSMUA_Achr4P23760_001 Banana plasma membrane 57.89 38.26
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 66.12 38.07
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 63.82 37.82
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 63.49 37.62
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 63.16 37.5
CDY33962 Canola plasma membrane 39.14 37.19
CDY70471 Canola cytosol, peroxisome, plasma membrane 36.84 36.96
CDY64933 Canola plasma membrane 60.86 36.63
TraesCS2A01G222300.1 Wheat plasma membrane 59.21 36.51
TraesCS2B01G247700.2 Wheat plasma membrane 58.88 36.31
TraesCS2D01G228200.1 Wheat plasma membrane 58.88 36.31
TraesCS3B01G485100.1 Wheat plasma membrane 65.13 35.93
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 58.55 35.89
HORVU2Hr1G046420.16 Barley plasma membrane 58.22 35.83
CDY12916 Canola cytosol, plasma membrane, vacuole 58.88 35.73
CDY19507 Canola cytosol, plasma membrane, vacuole 58.88 35.73
CDY64820 Canola plasma membrane 60.86 35.44
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 66.12 35.26
Zm00001d006493_P001 Maize plasma membrane 65.46 34.91
CDY08798 Canola cytosol, peroxisome, plasma membrane 36.84 34.89
CDY25329 Canola plasma membrane 57.24 34.73
CDY47166 Canola plasma membrane 57.24 34.73
CDY14558 Canola plasma membrane 36.51 34.47
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 54.61 33.67
CDX76392 Canola plasma membrane 50.99 33.62
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 54.28 32.35
CDY34637 Canola plasma membrane 48.03 31.81
CDX79109 Canola plasma membrane 51.97 31.79
Zm00001d006494_P004 Maize plasma membrane 58.88 31.57
CDX94061 Canola peroxisome, plasma membrane, vacuole 52.63 31.56
CDX94063 Canola plasma membrane 52.63 31.56
CDX76391 Canola plasma membrane 51.97 31.47
CDY27434 Canola plasma membrane 51.97 31.47
CDY34833 Canola plasma membrane 47.37 31.37
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 70.72 31.25
CDX98712 Canola plasma membrane 51.97 31.16
CDX98711 Canola peroxisome, plasma membrane, vacuole 51.64 30.97
CDY27431 Canola plasma membrane 51.32 30.77
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 36.18 29.73
CDX98713 Canola plasma membrane 42.43 28.35
CDY06731 Canola cytosol, peroxisome, plasma membrane 42.11 26.45
CDY17070 Canola cytosol, peroxisome, plasma membrane 42.11 26.45
CDX83627 Canola cytosol, peroxisome, plasma membrane 43.42 26.24
CDY13643 Canola cytosol, peroxisome, plasma membrane 43.09 26.04
CDX67772 Canola plasma membrane 43.42 26.04
CDX94064 Canola plasma membrane 35.2 25.85
CDX98344 Canola plasma membrane 43.09 25.84
CDY26602 Canola cytosol, peroxisome, vacuole 44.08 25.82
CDY16041 Canola cytosol, peroxisome, vacuole 43.75 25.63
CDX83628 Canola plasma membrane 32.89 25.45
CDY21076 Canola cytosol, peroxisome, plasma membrane 43.42 25.43
CDY34598 Canola cytosol, peroxisome, vacuole 43.09 25.24
CDX69834 Canola plasma membrane 38.82 24.79
CDY07257 Canola endoplasmic reticulum, vacuole 26.64 24.77
CDY38453 Canola plasma membrane 32.24 24.62
CDX81281 Canola plasma membrane 37.83 23.76
CDX89406 Canola plasma membrane 39.47 23.44
CDX94432 Canola plasma membrane 39.14 23.29
CDX97001 Canola plasma membrane 37.5 23.22
CDX97005 Canola plasma membrane 36.84 23.0
CDY49481 Canola plasma membrane 32.89 22.88
CDX69835 Canola plasma membrane 36.51 22.79
CDX81176 Canola plasma membrane 36.51 22.75
CDX93794 Canola plasma membrane 36.84 22.72
CDX85764 Canola plasma membrane 36.84 22.4
CDY40093 Canola plasma membrane 36.84 22.31
CDY40095 Canola plasma membrane 35.53 22.18
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 39.14 21.92
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 39.14 21.92
CDX81174 Canola plasma membrane 28.95 21.67
CDX78379 Canola peroxisome, plasma membrane, vacuole 32.89 21.64
CDY08796 Canola plasma membrane 38.49 21.59
CDY61495 Canola plasma membrane 38.49 21.47
CDX78378 Canola plasma membrane 34.21 21.44
CDX81172 Canola plasma membrane 34.21 21.44
CDY54720 Canola plasma membrane 38.82 21.0
CDY16896 Canola plasma membrane 32.57 19.96
CDY08797 Canola plasma membrane 36.84 19.82
CDY51758 Canola plasma membrane 32.24 19.64
CDY29945 Canola plasma membrane 31.91 19.48
CDY50654 Canola plasma membrane 31.91 19.44
CDY44967 Canola plasma membrane 25.66 19.4
CDY21177 Canola plasma membrane 31.25 19.08
CDY50190 Canola nucleus, peroxisome, plasma membrane 37.5 18.91
CDX92726 Canola nucleus, peroxisome, plasma membrane 36.84 18.73
CDY01224 Canola plasma membrane 19.08 17.21
CDX84047 Canola plasma membrane 35.2 15.2
CDX69836 Canola plasma membrane 37.17 11.01
CDY33131 Canola golgi, plasma membrane, vacuole 0.0 0.0
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 0.0 0.0
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078FY17UniProt:A0A078FY17EnsemblPlants:CDY19295ProteinID:CDY19295ProteinID:CDY19295.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00006638001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF188TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0004EE6B72SEG:seg::::
Description
BnaC01g31850DBnaC01g31850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FY17]
Coordinates
chrLK032094:+:384304..385328
Molecular Weight (calculated)
33183.9 Da
IEP (calculated)
7.493
GRAVY (calculated)
0.514
Length
304 amino acids
Sequence
(BLAST)
001: MDSSQNDGLY EQLLHPQSDG TVPLSPSTES RNGELERVLS DVETPLFHRL RKATMIESKL LFKLAAPAVI VYMINYMMSM STQIFPGHLG NLELAAASLG
101: NTGIKTFAYG LMLGMGSAVE TLCGQAFGGR KYEMLGIYLR RSTVLLTLAG VLLTLIYVFS KPILLFLGES PEIASAASIF VYGLIPQIFA YAVNFPIQKF
201: LQSQSIVAPS AYISTATLFV HLLLSWLAIY KLGMGLLGAS LVLSLSWWSI VVAQFVYIVT SDRCRETWRG FSVQAFSGLP SFFKLSAASA VMLCLETVEA
301: GKPD
Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)
001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
Arabidopsis Description
DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.