Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G506500.3 | Wheat | cytosol, peroxisome, plasma membrane | 97.39 | 97.39 |
| TraesCS3A01G500000.1 | Wheat | cytosol, peroxisome, plasma membrane | 96.39 | 96.78 |
| TraesCS3B01G563100.2 | Wheat | cytosol, peroxisome, plasma membrane | 96.39 | 96.01 |
| TraesCS3B01G563200.2 | Wheat | cytosol, peroxisome, plasma membrane | 95.79 | 95.79 |
| TraesCS3B01G563500.1 | Wheat | cytosol, peroxisome, plasma membrane | 92.99 | 92.99 |
| TraesCS3B01G563700.1 | Wheat | cytosol, peroxisome, plasma membrane | 91.98 | 92.35 |
| TraesCS3B01G562500.1 | Wheat | cytosol, plasma membrane, vacuole | 81.16 | 82.32 |
| TraesCS3B01G562400.2 | Wheat | plasma membrane | 81.36 | 81.53 |
| EER91319 | Sorghum | cytosol, peroxisome, plasma membrane | 81.36 | 80.72 |
| Zm00001d033061_P002 | Maize | cytosol, plasma membrane, vacuole | 79.36 | 80.32 |
| Os03t0572900-01 | Rice | plasma membrane | 79.96 | 79.8 |
| GSMUA_Achr6P00360_001 | Banana | vacuole | 64.73 | 79.36 |
| Zm00001d013809_P002 | Maize | plasma membrane | 78.56 | 78.87 |
| Zm00001d033063_P001 | Maize | vacuole | 78.16 | 78.0 |
| CDY33131 | Canola | golgi, plasma membrane, vacuole | 25.65 | 72.73 |
| GSMUA_Achr2P14000_001 | Banana | peroxisome, plasma membrane, vacuole | 75.75 | 72.55 |
| TraesCS5B01G326600.1 | Wheat | cytosol, peroxisome, plasma membrane | 73.35 | 71.48 |
| Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 70.94 | 70.38 |
| KRH26788 | Soybean | plasma membrane | 70.34 | 69.64 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 67.54 | 69.63 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 70.54 | 69.57 |
| Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 69.34 | 69.34 |
| CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 43.89 | 69.09 |
| KRH56125 | Soybean | plasma membrane | 71.54 | 69.05 |
| Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 67.33 | 68.99 |
| Bra001840.1-P | Field mustard | plasma membrane | 63.13 | 68.93 |
| CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 43.69 | 68.77 |
| Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 69.54 | 68.71 |
| VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 69.74 | 68.64 |
| CDY38631 | Canola | cytosol, peroxisome, vacuole | 70.34 | 68.55 |
| CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 69.14 | 68.32 |
| CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 67.74 | 68.28 |
| CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 70.14 | 68.09 |
| CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 68.54 | 67.99 |
| Solyc12g005850.1.1 | Tomato | plasma membrane | 69.74 | 67.97 |
| CDX92916 | Canola | cytosol, plasma membrane, vacuole | 68.74 | 67.92 |
| VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 68.94 | 67.85 |
| TraesCS1B01G037000.1 | Wheat | cytosol, peroxisome, vacuole | 69.74 | 67.84 |
| GSMUA_Achr4P23760_001 | Banana | plasma membrane | 62.53 | 67.83 |
| TraesCS2B01G247700.2 | Wheat | plasma membrane | 66.93 | 67.75 |
| CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 69.74 | 67.7 |
| CDY33130 | Canola | cytosol, peroxisome, vacuole | 41.68 | 67.53 |
| TraesCS4B01G388800.1 | Wheat | plasma membrane | 67.33 | 67.33 |
| Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 66.33 | 66.2 |
| CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 40.28 | 66.12 |
| VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 67.33 | 65.24 |
| KRH25385 | Soybean | plasma membrane | 57.31 | 64.85 |
| TraesCS3B01G485100.1 | Wheat | plasma membrane | 69.34 | 62.79 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 64.93 | 61.83 |
| VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 65.93 | 47.82 |
| TraesCS5B01G033600.1 | Wheat | plasma membrane | 45.29 | 45.11 |
| TraesCS7B01G137200.1 | Wheat | plasma membrane | 43.29 | 45.09 |
| TraesCS5B01G355700.1 | Wheat | peroxisome, plasma membrane, vacuole | 45.29 | 44.93 |
| TraesCS7B01G384300.1 | Wheat | plasma membrane | 42.89 | 44.86 |
| TraesCS4B01G070000.1 | Wheat | plasma membrane | 42.28 | 44.8 |
| TraesCS7B01G032100.1 | Wheat | plasma membrane | 42.89 | 44.68 |
| TraesCS7B01G030600.1 | Wheat | plasma membrane | 43.69 | 44.67 |
| TraesCS4B01G304300.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.09 | 44.44 |
| TraesCS3B01G336100.1 | Wheat | golgi, nucleus, plasma membrane | 42.28 | 44.33 |
| TraesCS4B01G070100.1 | Wheat | plasma membrane | 41.68 | 43.97 |
| TraesCS5B01G245400.1 | Wheat | plasma membrane | 41.48 | 43.95 |
| TraesCS2B01G612900.1 | Wheat | plasma membrane | 42.08 | 43.75 |
| TraesCS7B01G032300.1 | Wheat | plasma membrane | 41.08 | 43.07 |
| TraesCS5B01G245500.1 | Wheat | plasma membrane | 40.88 | 42.77 |
| TraesCS7B01G170800.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.89 | 42.54 |
| TraesCS6B01G440300.1 | Wheat | plasma membrane | 41.88 | 41.47 |
| TraesCS5B01G350400.1 | Wheat | cytosol, plasma membrane, vacuole | 40.48 | 41.06 |
| TraesCS4B01G128600.1 | Wheat | plasma membrane | 40.48 | 40.48 |
| TraesCS3B01G039300.1 | Wheat | plasma membrane | 39.68 | 39.84 |
| TraesCS5B01G350500.1 | Wheat | plasma membrane | 39.48 | 39.8 |
| TraesCS6B01G440400.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.08 | 37.57 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G563400.4 | EnsemblPlantsGene:TraesCS3B01G563400 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:MATE_fam | ncoils:Coil | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF200 | PFAM:PF01554 | SEG:seg |
| TIGR:cd13132 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | MapMan:24.2.4.1.1 | : | : |
Description
No Description!
Coordinates
chr3B:+:796460841..796466101
Molecular Weight (calculated)
53759.4 Da
IEP (calculated)
6.301
GRAVY (calculated)
0.712
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGEEHEHE HGASCRLESI LTDTSAPLAE RAWAAGTVEL RLLARLAAPA VVVYMINFVM SMSTQILCGH LGTLELAAAS LGNTGVQTFA YGLMLGMGSA
101: VETLCGQAYG AHKYDMLGIY LQRSVILLAL TGIPLAVMYA FSEPLLLLMG QSPEIARAAS IFVYGLIPQI FAYAVNFPIQ KFLQAQSIVL PSAYISTATL
201: ILHVMLSWVL MYKVGLGLLG ASLVLSVSWW IIVGAQFVYI VMSPTCRHTW TGFSWQAFSG LPSFFKLSAA SAVMLCLETW YFQVLVIIAG LLPNPEISLD
301: SLSVCMTIYG WVFMISVGFN AAASVRVSNE LGAGNPKSAF FSVWVVTGLS TTISTILAIV ILCLRNHISY LFTDGEAVSD AVADLCPLLA ITLVLGGIQP
401: VLTGVAVGCG WQQFVAYVNV GSYYIVGVPL GVVLGFFFNL GAKGIWGGLI GGTALQTAIL LWVTMRTDWT KEVEEAQKRL NKWDEKKEPL LAGFKDNNK
101: VETLCGQAYG AHKYDMLGIY LQRSVILLAL TGIPLAVMYA FSEPLLLLMG QSPEIARAAS IFVYGLIPQI FAYAVNFPIQ KFLQAQSIVL PSAYISTATL
201: ILHVMLSWVL MYKVGLGLLG ASLVLSVSWW IIVGAQFVYI VMSPTCRHTW TGFSWQAFSG LPSFFKLSAA SAVMLCLETW YFQVLVIIAG LLPNPEISLD
301: SLSVCMTIYG WVFMISVGFN AAASVRVSNE LGAGNPKSAF FSVWVVTGLS TTISTILAIV ILCLRNHISY LFTDGEAVSD AVADLCPLLA ITLVLGGIQP
401: VLTGVAVGCG WQQFVAYVNV GSYYIVGVPL GVVLGFFFNL GAKGIWGGLI GGTALQTAIL LWVTMRTDWT KEVEEAQKRL NKWDEKKEPL LAGFKDNNK
001: MEVPSETTNL ADLRRPLVVP VVSERKPPAD VGLGLESVLT ERSLPYRRRV YLGACIEMKL LFRLALPAIL VYLVNSGMGI SARIFAGHLG KNELAAASIG
101: NSCFSLVYGL MLGMGSAVET LCGQAYGAHR YEMLGIYLQR ATIVLALVGL PMTLLYTFSY PILILLGEPK TVSYMGSKYI AGLIPQIFAY AVNFTAQKFL
201: QAQSVVAPSA FISAAALILQ ILLTWITVYV MDMGFMGIAY VLTISWWVIV GSQCFYIAVS PKFRHTWTGL SWRSLQGLWS FFKLSAGSAV MICLEMWYSQ
301: ILVLLAGLLE NPARSLDSLS ICMSISALSF MVSVGFNAAV SVRTSNELGA GNPKSAWFST WTATFVSFVI SVTEALAVIW FRDYVSYIFT EDADVAKAVS
401: DLCPFLAITI ILNGIQPVLS GVAVGCGWQT YVAYVNVGCY YVVGIPVGCI LGFTFDFQAK GIWTGMIGGT LMQTLILLYV TYRTDWDKEV EKARKRLDLW
501: DDKKEPLQN
101: NSCFSLVYGL MLGMGSAVET LCGQAYGAHR YEMLGIYLQR ATIVLALVGL PMTLLYTFSY PILILLGEPK TVSYMGSKYI AGLIPQIFAY AVNFTAQKFL
201: QAQSVVAPSA FISAAALILQ ILLTWITVYV MDMGFMGIAY VLTISWWVIV GSQCFYIAVS PKFRHTWTGL SWRSLQGLWS FFKLSAGSAV MICLEMWYSQ
301: ILVLLAGLLE NPARSLDSLS ICMSISALSF MVSVGFNAAV SVRTSNELGA GNPKSAWFST WTATFVSFVI SVTEALAVIW FRDYVSYIFT EDADVAKAVS
401: DLCPFLAITI ILNGIQPVLS GVAVGCGWQT YVAYVNVGCY YVVGIPVGCI LGFTFDFQAK GIWTGMIGGT LMQTLILLYV TYRTDWDKEV EKARKRLDLW
501: DDKKEPLQN
Arabidopsis Description
MATE efflux family protein [Source:TAIR;Acc:AT4G21910]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.