Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G506500.3 | Wheat | cytosol, peroxisome, plasma membrane | 97.38 | 96.99 |
| TraesCS3B01G563400.4 | Wheat | cytosol, peroxisome, plasma membrane | 96.78 | 96.39 |
| TraesCS3B01G563100.2 | Wheat | cytosol, peroxisome, plasma membrane | 95.77 | 95.01 |
| TraesCS3B01G563200.2 | Wheat | cytosol, peroxisome, plasma membrane | 95.17 | 94.79 |
| TraesCS3A01G499800.1 | Wheat | cytosol, peroxisome, plasma membrane | 92.96 | 93.15 |
| TraesCS3A01G499300.1 | Wheat | cytosol, peroxisome, plasma membrane | 81.49 | 81.49 |
| TraesCS3A01G499200.1 | Wheat | plasma membrane | 81.09 | 80.92 |
| EER91319 | Sorghum | cytosol, peroxisome, plasma membrane | 81.09 | 80.12 |
| Zm00001d033061_P002 | Maize | cytosol, plasma membrane, vacuole | 78.67 | 79.31 |
| GSMUA_Achr6P00360_001 | Banana | vacuole | 64.79 | 79.12 |
| Os03t0572900-01 | Rice | plasma membrane | 79.48 | 79.0 |
| Zm00001d013809_P002 | Maize | plasma membrane | 78.27 | 78.27 |
| Zm00001d033063_P001 | Maize | vacuole | 77.67 | 77.2 |
| GSMUA_Achr2P14000_001 | Banana | peroxisome, plasma membrane, vacuole | 75.25 | 71.78 |
| CDY33131 | Canola | golgi, plasma membrane, vacuole | 25.15 | 71.02 |
| Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 70.83 | 69.98 |
| KRH26788 | Soybean | plasma membrane | 70.62 | 69.64 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 67.61 | 69.42 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 70.22 | 68.97 |
| KRH56125 | Soybean | plasma membrane | 71.63 | 68.86 |
| CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 43.86 | 68.77 |
| Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 68.81 | 68.54 |
| CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 43.66 | 68.45 |
| Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 67.0 | 68.38 |
| Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 69.42 | 68.32 |
| Bra001840.1-P | Field mustard | plasma membrane | 62.78 | 68.27 |
| VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 69.42 | 68.05 |
| TraesCS1A01G029900.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.22 | 68.03 |
| CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 69.01 | 67.92 |
| CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 67.61 | 67.88 |
| Solyc12g005850.1.1 | Tomato | plasma membrane | 69.82 | 67.77 |
| CDY38631 | Canola | cytosol, peroxisome, vacuole | 69.82 | 67.77 |
| TraesCS2A01G222300.1 | Wheat | plasma membrane | 67.2 | 67.75 |
| CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 68.41 | 67.59 |
| CDY33130 | Canola | cytosol, peroxisome, vacuole | 41.85 | 67.53 |
| VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 68.81 | 67.46 |
| GSMUA_Achr4P23760_001 | Banana | plasma membrane | 62.37 | 67.39 |
| CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 69.62 | 67.32 |
| CDX92916 | Canola | cytosol, plasma membrane, vacuole | 68.21 | 67.13 |
| CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 69.22 | 66.93 |
| TraesCS5A01G553200.1 | Wheat | plasma membrane | 66.8 | 66.53 |
| Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 66.6 | 66.2 |
| CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 40.04 | 65.46 |
| VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 67.2 | 64.85 |
| KRH25385 | Soybean | plasma membrane | 57.55 | 64.85 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 65.19 | 61.83 |
| TraesCS5A01G326300.4 | Wheat | cytosol, plasma membrane, vacuole | 68.21 | 59.47 |
| TraesCS5A01G326700.1 | Wheat | cytosol, peroxisome, plasma membrane | 60.56 | 59.02 |
| VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 65.79 | 47.53 |
| TraesCS5A01G349000.1 | Wheat | plasma membrane | 39.24 | 45.35 |
| TraesCS4A01G245400.1 | Wheat | plasma membrane | 43.26 | 45.26 |
| TraesCS5A01G353300.1 | Wheat | peroxisome, plasma membrane, vacuole | 45.67 | 45.13 |
| TraesCS5A01G033400.1 | Wheat | peroxisome, plasma membrane, vacuole | 45.27 | 44.91 |
| TraesCS7A01G241600.1 | Wheat | plasma membrane | 43.26 | 44.89 |
| TraesCS7A01G482100.1 | Wheat | plasma membrane | 43.06 | 44.68 |
| TraesCS3A01G300400.1 | Wheat | golgi, nucleus, plasma membrane | 42.86 | 44.56 |
| TraesCS4A01G404500.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.27 | 44.44 |
| TraesCS7A01G130300.1 | Wheat | plasma membrane | 43.46 | 44.44 |
| TraesCS7A01G131500.2 | Wheat | plasma membrane | 42.25 | 44.12 |
| TraesCS4A01G245300.1 | Wheat | plasma membrane | 41.45 | 43.55 |
| TraesCS7A01G131600.1 | Wheat | plasma membrane | 41.45 | 43.28 |
| TraesCS2A01G534900.1 | Wheat | golgi, plasma membrane, vacuole | 41.25 | 43.16 |
| TraesCS7A01G272800.1 | Wheat | plasma membrane | 43.46 | 42.94 |
| TraesCS5A01G247900.1 | Wheat | golgi, peroxisome, plasma membrane | 40.44 | 42.23 |
| TraesCS5A01G142000.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.45 | 41.78 |
| TraesCS6A01G400100.1 | Wheat | plasma membrane | 42.45 | 41.62 |
| TraesCS3A01G044500.1 | Wheat | plasma membrane | 40.24 | 39.92 |
| TraesCS5A01G349100.1 | Wheat | plasma membrane | 39.64 | 39.72 |
| TraesCS6A01G400200.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.86 | 38.1 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G500000.1 | EnsemblPlantsGene:TraesCS3A01G500000 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:MATE_fam | ncoils:Coil | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF200 | PFAM:PF01554 | SEG:seg |
| TIGR:cd13132 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | MapMan:24.2.4.1.1 | : | : |
Description
No Description!
Coordinates
chr3A:-:724645493..724650895
Molecular Weight (calculated)
53355.8 Da
IEP (calculated)
6.084
GRAVY (calculated)
0.745
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGEEHEHG ASCRLESILT DTSAPMAERA WAAASVELRL LARLAAPAVV VYMINFVMSM STQILCGHLG TLELAAASLG NTGVQTFAYG LMLGMGSAVE
101: TLCGQAYGAH KYDMLGIYLQ RSIILLGLTG IPLAVMYAFS EPLLLLMGQS PEIAHAASIF VYGLIPQIFA YAVNFPIQKF LQAQSIVLPS AYISTATLVL
201: HVMLSWVLMY KVSLGLLGAS LVLSVSWWII VGAQFVYIVV SPTCRHTWTG FSWQAFSGLP SFFKLSAASA VMLCLETWYF QVLVIIAGLL PNPEIALDSL
301: SVCMTIYGWV FMISVGFNAA ASVRVSNELG AGNPKSAFFS VWVVTGLSAT ISTILAVVIL CLRNHISYLF TDGEAVSDAV ADLCPLLAVT LVLGGIQPVL
401: TGVAVGCGWQ QFVAYVNVGS YYVVGVPLGV VLGFFFNLGA KGIWGGLIGG TALQTAILLW VTIRTDWTKE VEEAQKRLNN WDEKKEPLLA GFKDNNK
101: TLCGQAYGAH KYDMLGIYLQ RSIILLGLTG IPLAVMYAFS EPLLLLMGQS PEIAHAASIF VYGLIPQIFA YAVNFPIQKF LQAQSIVLPS AYISTATLVL
201: HVMLSWVLMY KVSLGLLGAS LVLSVSWWII VGAQFVYIVV SPTCRHTWTG FSWQAFSGLP SFFKLSAASA VMLCLETWYF QVLVIIAGLL PNPEIALDSL
301: SVCMTIYGWV FMISVGFNAA ASVRVSNELG AGNPKSAFFS VWVVTGLSAT ISTILAVVIL CLRNHISYLF TDGEAVSDAV ADLCPLLAVT LVLGGIQPVL
401: TGVAVGCGWQ QFVAYVNVGS YYVVGVPLGV VLGFFFNLGA KGIWGGLIGG TALQTAILLW VTIRTDWTKE VEEAQKRLNN WDEKKEPLLA GFKDNNK
001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
Arabidopsis Description
DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.