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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane, vacuole
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr4P08270_001
GSMUA_Achr4P15460_001
GSMUA_Achr6P14800_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 GSMUA_Achr4P08270_001 AT3G16310.1 21798944
AT3G21690.1 GSMUA_Achr4P15460_001 AT3G16310.1 21798944
AT3G21690.1 GSMUA_Achr6P14800_001 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P00360_001 Banana vacuole 71.98 92.14
GSMUA_Achr9P11610_001 Banana plasma membrane 75.05 78.99
GSMUA_Achr4P23760_001 Banana plasma membrane 69.29 78.48
EER91319 Sorghum cytosol, peroxisome, plasma membrane 75.62 78.33
Zm00001d013809_P002 Maize plasma membrane 74.09 77.67
Os03t0572900-01 Rice plasma membrane 74.47 77.6
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 72.55 76.67
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 72.36 76.63
Zm00001d033063_P001 Maize vacuole 73.51 76.6
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 72.94 76.46
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 71.98 76.22
KRH26788 Soybean plasma membrane 73.7 76.19
CDY33131 Canola golgi, plasma membrane, vacuole 25.72 76.14
TraesCS3A01G499200.1 Wheat plasma membrane 72.55 75.9
TraesCS3D01G506100.1 Wheat plasma membrane 72.55 75.9
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 72.55 75.75
Bra001840.1-P Field mustard plasma membrane 66.41 75.71
TraesCS3B01G562400.2 Wheat plasma membrane 72.36 75.7
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 72.36 75.55
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 71.78 75.25
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 71.78 75.25
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 72.36 75.25
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 71.4 75.0
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 71.78 74.95
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 71.59 74.9
CDY69153 Canola cytosol, peroxisome, plasma membrane 45.49 74.76
CDY24250 Canola cytosol, peroxisome, plasma membrane 45.49 74.76
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 72.74 74.75
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 72.17 74.75
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 71.59 74.75
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 71.59 74.75
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 72.36 74.65
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 69.29 74.59
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 72.36 74.51
CDY33130 Canola cytosol, peroxisome, vacuole 43.95 74.35
CDY33129 Canola cytosol, peroxisome, plasma membrane 71.98 74.26
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 72.17 74.16
CDY65669 Canola cytosol, peroxisome, plasma membrane 70.25 73.94
CDX92916 Canola cytosol, plasma membrane, vacuole 71.59 73.86
CDY38631 Canola cytosol, peroxisome, vacuole 72.55 73.83
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 68.71 73.51
Solyc12g005850.1.1 Tomato plasma membrane 72.17 73.44
CDY39494 Canola cytosol, peroxisome, plasma membrane 71.98 72.96
KRH56125 Soybean plasma membrane 72.36 72.92
CDY39493 Canola cytosol, peroxisome, plasma membrane 70.25 72.76
CDY19294 Canola cytosol, peroxisome, plasma membrane 71.4 72.37
CDY19295 Canola cytosol, peroxisome, plasma membrane 41.84 71.71
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 68.71 71.6
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 70.25 70.93
VIT_12s0059g02160.t01 Wine grape plasma membrane 70.06 70.87
PGSC0003DMT400022543 Potato plasma membrane 67.56 67.18
KRH25385 Soybean plasma membrane 56.62 66.89
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 69.1 52.33
GSMUA_Achr7P11770_001 Banana plasma membrane 40.12 48.72
GSMUA_Achr3P21260_001 Banana plasma membrane 41.27 46.74
GSMUA_Achr4P22990_001 Banana plasma membrane 44.91 46.52
GSMUA_Achr8P03000_001 Banana plasma membrane 44.34 46.39
GSMUA_Achr8P18130_001 Banana mitochondrion, plasma membrane, vacuole 43.38 46.31
GSMUA_Achr7P04510_001 Banana plasma membrane 35.32 46.23
GSMUA_Achr7P12820_001 Banana cytosol 38.39 46.19
GSMUA_Achr1P15340_001 Banana plasma membrane 41.07 45.05
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 41.46 44.91
GSMUA_Achr2P03560_001 Banana cytosol, peroxisome, plasma membrane 42.42 44.2
GSMUA_Achr4P05060_001 Banana peroxisome 43.38 44.14
GSMUA_Achr9P26370_001 Banana plasma membrane 39.35 43.99
GSMUA_Achr6P04190_001 Banana plasma membrane 36.47 43.98
GSMUA_Achr5P01870_001 Banana plasma membrane 39.54 43.64
GSMUA_Achr7P21610_001 Banana plasma membrane 39.73 42.68
GSMUA_AchrUn_... Banana golgi, peroxisome, vacuole 40.12 41.3
Protein Annotations
MapMan:24.2.4.1.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr2G14000_001EnsemblPlants:GSMUA_Achr2P14000_001EnsemblPlants:GSMUA_Achr2T14000_001UniProt:M0S7U1InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF200TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002955ABE
SEG:seg:::::
Description
Protein TRANSPARENT TESTA 12 [Source:GMGC_GENE;Acc:GSMUA_Achr2G14000_001]
Coordinates
chr2:+:15919073..15923747
Molecular Weight (calculated)
56261.6 Da
IEP (calculated)
5.415
GRAVY (calculated)
0.702
Length
521 amino acids
Sequence
(BLAST)
001: MDSAAALSSP LLSPTGNDDV DQPLPPSTPP AMADEGEAHG ASGQLEIVLN DASIPWARRM WLASLIEMKL LVFLAAPAVM VYMINYVMSM STQIFSGHLG
101: NLELAAASLG NTGIQIFAYG LMLGMGSAVE TLCGQAYGAH KYEMLGIYMQ RSTVLLMATG VPLAVIYAFS RPILVLLGES PEIAKAASIF VYGLIPQIFA
201: YAVNFPIQKF LQAQSIVAPS AYISATTLAV HLLLSWVAVY KIGLGLFGAS LVLSLSWWII VAAQFMYIVT SRRCRFTWMG FTWQAFSGLP EFFRLSSASA
301: VMLCLETWYF QVLVLIAGLL ENPELSLDSL SVCMTISGWI FMISVGFNAA ASVRVSNELG AGNPKSAAFS VIVVTMMSFI ISVIAAVIVL CLRDYISYAF
401: TEGETVARAV SDLCPLLAIT LILNGIQPVL SGVAVGCGWQ AFVAYVNVGC YYIVGVPFGS LLGFKFGLGA KGIWGGMIGG TIMQTLILMW VTFRTDWNKE
501: VEEAKKRLNK WDGKKEEPLL S
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.