Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- cytosol 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P11770_001 | Banana | plasma membrane | 62.99 | 70.63 |
GSMUA_Achr3P21260_001 | Banana | plasma membrane | 63.2 | 66.09 |
CDY69605 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.95 | 65.22 |
GSMUA_Achr8P18130_001 | Banana | mitochondrion, plasma membrane, vacuole | 65.07 | 64.14 |
GSMUA_Achr7P12820_001 | Banana | cytosol | 57.38 | 63.74 |
TraesCS5D01G254500.1 | Wheat | mitochondrion, plasma membrane | 39.92 | 62.14 |
Bra024381.1-P | Field mustard | plasma membrane | 61.33 | 60.95 |
VIT_18s0001g06790.t01 | Wine grape | plasma membrane | 61.95 | 60.82 |
KRH74515 | Soybean | cytosol, peroxisome, plasma membrane | 61.95 | 60.69 |
Solyc04g074850.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 60.71 | 60.58 |
CDX81281 | Canola | plasma membrane | 60.91 | 60.54 |
GSMUA_Achr6P04190_001 | Banana | plasma membrane | 54.26 | 60.42 |
Bra037814.1-P | Field mustard | plasma membrane | 60.5 | 60.25 |
AT5G65380.1 | Thale cress | cytosol, peroxisome, plasma membrane | 60.71 | 60.08 |
Zm00001d050457_P002 | Maize | plasma membrane | 59.88 | 59.63 |
Os08t0480000-01 | Rice | plasma membrane | 60.5 | 59.51 |
Bra024380.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 58.42 | 59.41 |
TraesCS5A01G247900.1 | Wheat | golgi, peroxisome, plasma membrane | 58.42 | 59.03 |
Solyc11g010380.1.1 | Tomato | cytosol, plasma membrane, vacuole | 60.5 | 59.03 |
PGSC0003DMT400041642 | Potato | cytosol, plasma membrane, vacuole | 60.29 | 58.82 |
PGSC0003DMT400005437 | Potato | cytosol, peroxisome, plasma membrane | 60.91 | 58.72 |
TraesCS7D01G129700.1 | Wheat | plasma membrane | 58.42 | 58.42 |
Os09t0468000-01 | Rice | plasma membrane | 58.42 | 58.3 |
CDX78379 | Canola | peroxisome, plasma membrane, vacuole | 55.93 | 58.23 |
CDX81176 | Canola | plasma membrane | 59.04 | 58.2 |
TraesCS7B01G030600.1 | Wheat | plasma membrane | 58.84 | 57.99 |
TraesCS5B01G245500.1 | Wheat | plasma membrane | 57.38 | 57.86 |
TraesCS5D01G254400.1 | Wheat | plasma membrane | 56.55 | 57.75 |
Bra006059.1-P | Field mustard | plasma membrane | 58.42 | 57.7 |
TraesCS5B01G245400.1 | Wheat | plasma membrane | 56.34 | 57.54 |
KRH62283 | Soybean | cytosol, peroxisome, plasma membrane | 60.08 | 57.46 |
TraesCS7A01G130300.1 | Wheat | plasma membrane | 58.0 | 57.41 |
KXG25339 | Sorghum | cytosol, peroxisome, plasma membrane | 58.84 | 57.17 |
CDX69834 | Canola | plasma membrane | 56.55 | 57.14 |
CDX78378 | Canola | plasma membrane | 57.59 | 57.11 |
CDX97005 | Canola | plasma membrane | 57.8 | 57.08 |
CDY40093 | Canola | plasma membrane | 59.46 | 56.97 |
CDY33962 | Canola | plasma membrane | 37.84 | 56.88 |
CDX97001 | Canola | plasma membrane | 58.0 | 56.82 |
CDX85764 | Canola | plasma membrane | 59.04 | 56.8 |
CDX69835 | Canola | plasma membrane | 57.38 | 56.67 |
AT5G10420.1 | Thale cress | plasma membrane | 57.38 | 56.44 |
CDX81172 | Canola | plasma membrane | 56.76 | 56.29 |
VIT_18s0001g06820.t01 | Wine grape | plasma membrane | 56.55 | 56.2 |
AT5G44050.1 | Thale cress | plasma membrane | 57.17 | 56.01 |
EER96893 | Sorghum | cytosol, peroxisome, vacuole | 55.51 | 55.97 |
Solyc04g074840.2.1 | Tomato | plasma membrane | 58.21 | 55.67 |
CDX81174 | Canola | plasma membrane | 46.99 | 55.66 |
CDY40095 | Canola | plasma membrane | 56.34 | 55.65 |
CDY70471 | Canola | cytosol, peroxisome, plasma membrane | 34.93 | 55.45 |
KXG35815 | Sorghum | plasma membrane | 55.51 | 55.39 |
Bra009034.1-P | Field mustard | plasma membrane | 49.06 | 55.01 |
EER96891 | Sorghum | cytosol, peroxisome, plasma membrane | 55.09 | 54.53 |
CDY08798 | Canola | cytosol, peroxisome, plasma membrane | 36.38 | 54.52 |
HORVU5Hr1G069900.5 | Barley | golgi | 58.0 | 54.49 |
CDY08796 | Canola | plasma membrane | 61.33 | 54.43 |
HORVU7Hr1G027270.10 | Barley | mitochondrion, peroxisome, vacuole | 59.04 | 54.3 |
CDY14558 | Canola | plasma membrane | 36.17 | 54.04 |
CDY61495 | Canola | plasma membrane | 61.12 | 53.95 |
Bra006058.1-P | Field mustard | plasma membrane | 56.96 | 52.09 |
CDY54720 | Canola | plasma membrane | 60.71 | 51.96 |
GSMUA_Achr7P21610_001 | Banana | plasma membrane | 51.56 | 51.13 |
CDY08797 | Canola | plasma membrane | 59.67 | 50.8 |
PGSC0003DMT400005432 | Potato | plasma membrane | 49.9 | 50.63 |
GSMUA_Achr6P00360_001 | Banana | vacuole | 42.2 | 49.88 |
KRH62279 | Soybean | cytosol, peroxisome, plasma membrane | 53.64 | 49.24 |
Bra024379.1-P | Field mustard | plasma membrane | 57.38 | 48.59 |
Bra028589.1-P | Field mustard | peroxisome | 41.79 | 48.43 |
GSMUA_Achr9P26370_001 | Banana | plasma membrane | 44.49 | 45.92 |
GSMUA_Achr7P04510_001 | Banana | plasma membrane | 37.84 | 45.73 |
GSMUA_Achr5P01870_001 | Banana | plasma membrane | 44.49 | 45.34 |
GSMUA_Achr1P15340_001 | Banana | plasma membrane | 43.45 | 44.0 |
GSMUA_Achr9P11610_001 | Banana | plasma membrane | 44.07 | 42.83 |
GSMUA_Achr4P05060_001 | Banana | peroxisome | 45.53 | 42.77 |
GSMUA_Achr4P23760_001 | Banana | plasma membrane | 40.54 | 42.39 |
GSMUA_Achr2P03560_001 | Banana | cytosol, peroxisome, plasma membrane | 43.87 | 42.2 |
Solyc04g074860.2.1 | Tomato | plasma membrane | 49.06 | 41.48 |
GSMUA_Achr2P14000_001 | Banana | peroxisome, plasma membrane, vacuole | 44.91 | 41.46 |
GSMUA_AchrUn_... | Banana | golgi, peroxisome, vacuole | 43.45 | 41.3 |
GSMUA_Achr4P22990_001 | Banana | plasma membrane | 41.79 | 39.96 |
GSMUA_Achr8P03000_001 | Banana | plasma membrane | 40.75 | 39.36 |
CDX69836 | Canola | plasma membrane | 56.13 | 26.32 |
Protein Annotations
MapMan:24.2.4.1.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006855 |
GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
EnsemblPlantsGene:GSMUA_Achr10G24960_001 | EnsemblPlants:GSMUA_Achr10P24960_001 | EnsemblPlants:GSMUA_Achr10T24960_001 | UniProt:M0RL70 | InterPro:MATE_fam | PFAM:PF01554 |
PANTHER:PTHR11206 | PANTHER:PTHR11206:SF80 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI0002950DA2 | SEG:seg |
Description
Putative Protein TRANSPARENT TESTA 12 [Source:GMGC_GENE;Acc:GSMUA_Achr10G24960_001]
Coordinates
chr10:-:29150450..29153453
Molecular Weight (calculated)
52762.6 Da
IEP (calculated)
8.336
GRAVY (calculated)
0.645
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTEKEEEEV PLLRNREVGE ASEPGLLRRV WSESKKLWRI VGPAIFLRIT SYSMNLATQA FAGHLGDLEL AAIDLYRVLL RVILIVQLGM ASALETLCGQ
101: AYGAKKHHML GVYLQRSWIV LFGCAVLLLP VYIMATPLLE LMGEPAELAR EAGRVCIWII PMHLSFAFLF PLNRFFQSQL KNSVSAVTSG LVLAVHIFLS
201: WLVVYKLDQG LRGAALTLCF SWWLQVLGQF AYVACGRCPE TWKGFSMDAF LELWEFVKLS AASGVMLCLE NWYYRVLILL TGSLKNAEIA VDAISICMNI
301: NNWELMIPLA FFAGTGVRVA IELGAGNSRG AKFATGVSAV TSTVIGLFTC CLIVAFHDKL ALIFSSSTVV LNAVDKLSLL LATAILLNSI QPILSGVAVG
401: AGWQATVAYV NVGSYYLIGI PVGVIMGSVF HLGVRGIWAG MIGGTAVQTL VLIYLTMRCD WDKEALKASA RMEKWTISRK S
101: AYGAKKHHML GVYLQRSWIV LFGCAVLLLP VYIMATPLLE LMGEPAELAR EAGRVCIWII PMHLSFAFLF PLNRFFQSQL KNSVSAVTSG LVLAVHIFLS
201: WLVVYKLDQG LRGAALTLCF SWWLQVLGQF AYVACGRCPE TWKGFSMDAF LELWEFVKLS AASGVMLCLE NWYYRVLILL TGSLKNAEIA VDAISICMNI
301: NNWELMIPLA FFAGTGVRVA IELGAGNSRG AKFATGVSAV TSTVIGLFTC CLIVAFHDKL ALIFSSSTVV LNAVDKLSLL LATAILLNSI QPILSGVAVG
401: AGWQATVAYV NVGSYYLIGI PVGVIMGSVF HLGVRGIWAG MIGGTAVQTL VLIYLTMRCD WDKEALKASA RMEKWTISRK S
001: MRGGDGEEGS ESRVALLKSP HTAEEDGEGL KDRILVETKK LWQIVGPAIF SRVTTYSMLV ITQAFAGHLG DLELAAISIV NNVTVGFNFG LLLGMASALE
101: TLCGQAFGAK KYHMLGVYMQ RSWIVLFFCC VLLLPTYIFT TPVLKFLGQP DDIAELSGVV AIWVIPLHFA FTLSFPLQRF LQCQLKNRVT AYAAAVALVV
201: HILVCWLFVD GLKLGVVGTV ATISISWWVN VLILLVYSTC GGCPLTWTGL SSEALTGLWE FLKLSASSGV MLCLENWYYR ILIIMTGNLQ NARIAVDSLS
301: ICMAINGWEM MIPLAFFAGT GVRVANELGA GNGKGARFAT IVSVTQSLII GLFFWVLIML LHNQIAWIFS SSVAVLDAVN KLSLLLAFTV LLNSVQPVLS
401: GVAVGSGWQS YVAYINLGCY YCIGVPLGFL MGWGFKLGVM GIWGGMIFGG TAVQTMILSF ITMRCDWEKE AQKASARINK WSNTIK
101: TLCGQAFGAK KYHMLGVYMQ RSWIVLFFCC VLLLPTYIFT TPVLKFLGQP DDIAELSGVV AIWVIPLHFA FTLSFPLQRF LQCQLKNRVT AYAAAVALVV
201: HILVCWLFVD GLKLGVVGTV ATISISWWVN VLILLVYSTC GGCPLTWTGL SSEALTGLWE FLKLSASSGV MLCLENWYYR ILIIMTGNLQ NARIAVDSLS
301: ICMAINGWEM MIPLAFFAGT GVRVANELGA GNGKGARFAT IVSVTQSLII GLFFWVLIML LHNQIAWIFS SSVAVLDAVN KLSLLLAFTV LLNSVQPVLS
401: GVAVGSGWQS YVAYINLGCY YCIGVPLGFL MGWGFKLGVM GIWGGMIFGG TAVQTMILSF ITMRCDWEKE AQKASARINK WSNTIK
Arabidopsis Description
DTX27Protein DETOXIFICATION 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.