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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • cytosol 1
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, vacuole
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG35815 Sorghum plasma membrane 76.94 76.14
TraesCS5D01G254500.1 Wheat mitochondrion, plasma membrane 46.33 71.52
TraesCS5B01G245500.1 Wheat plasma membrane 70.65 70.65
TraesCS5A01G247900.1 Wheat golgi, peroxisome, plasma membrane 70.23 70.38
EER96891 Sorghum cytosol, peroxisome, plasma membrane 71.28 69.96
TraesCS5D01G254400.1 Wheat plasma membrane 66.04 66.88
TraesCS5B01G245400.1 Wheat plasma membrane 65.2 66.03
Os09t0468000-01 Rice plasma membrane 66.67 65.98
HORVU5Hr1G069900.5 Barley golgi 70.23 65.43
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 23.48 60.87
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 59.12 56.97
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 55.97 55.51
Bra024381.1-P Field mustard plasma membrane 55.14 54.34
Bra037814.1-P Field mustard plasma membrane 54.72 54.04
CDX81281 Canola plasma membrane 54.72 53.93
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 56.39 53.27
AT5G65380.1 Thale cress cytosol, peroxisome, plasma membrane 54.09 53.09
VIT_18s0001g06790.t01 Wine grape plasma membrane 54.3 52.86
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 52.2 52.64
CDX78379 Canola peroxisome, plasma membrane, vacuole 50.94 52.6
KRH74515 Soybean cytosol, peroxisome, plasma membrane 54.09 52.55
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 54.3 52.54
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 53.04 52.49
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 57.44 52.19
Bra006059.1-P Field mustard plasma membrane 53.04 51.95
VIT_18s0001g06820.t01 Wine grape plasma membrane 52.41 51.65
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 53.25 51.52
CDX81176 Canola plasma membrane 52.62 51.43
CDX69835 Canola plasma membrane 52.41 51.33
CDX97005 Canola plasma membrane 52.2 51.13
AT5G10420.1 Thale cress plasma membrane 52.2 50.92
KRH62283 Soybean cytosol, peroxisome, plasma membrane 53.67 50.89
PGSC0003DMT400005437 Potato cytosol, peroxisome, plasma membrane 52.62 50.3
CDY33962 Canola plasma membrane 33.54 50.0
CDY40095 Canola plasma membrane 50.94 49.9
CDX81172 Canola plasma membrane 50.73 49.9
CDX78378 Canola plasma membrane 50.73 49.9
CDY40093 Canola plasma membrane 52.41 49.8
CDX85764 Canola plasma membrane 52.2 49.8
Bra009034.1-P Field mustard plasma membrane 44.44 49.42
PGSC0003DMT400005432 Potato plasma membrane 49.06 49.37
CDX97001 Canola plasma membrane 50.73 49.29
CDX69834 Canola plasma membrane 49.06 49.16
AT5G44050.1 Thale cress plasma membrane 50.52 49.08
Solyc04g074840.2.1 Tomato plasma membrane 51.36 48.71
CDY08796 Canola plasma membrane 55.14 48.52
CDY70471 Canola cytosol, peroxisome, plasma membrane 30.61 48.18
CDY14558 Canola plasma membrane 32.49 48.14
CDY61495 Canola plasma membrane 54.93 48.07
CDY08798 Canola cytosol, peroxisome, plasma membrane 32.29 47.98
CDX81174 Canola plasma membrane 39.83 46.8
CDY54720 Canola plasma membrane 55.14 46.8
Bra006058.1-P Field mustard plasma membrane 49.9 45.25
KRH62279 Soybean cytosol, peroxisome, plasma membrane 49.48 45.04
CDY08797 Canola plasma membrane 53.25 44.96
EES15585 Sorghum cytosol, peroxisome, plasma membrane 49.48 44.95
Bra024379.1-P Field mustard plasma membrane 53.04 44.54
Bra028589.1-P Field mustard peroxisome 38.36 44.1
EES09180 Sorghum cytosol, peroxisome, plasma membrane 48.64 43.86
EER91319 Sorghum cytosol, peroxisome, plasma membrane 44.86 42.54
EES15223 Sorghum plasma membrane 45.28 42.52
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 45.49 42.38
OQU87609 Sorghum plasma membrane 36.27 42.3
EER91211 Sorghum plasma membrane 42.98 41.58
EER91321 Sorghum plasma membrane 43.19 41.12
KXG37120 Sorghum plasma membrane 43.4 40.99
KXG38133 Sorghum cytosol, peroxisome, vacuole 44.03 40.7
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 41.72 40.12
OQU85979 Sorghum cytosol, peroxisome, vacuole 42.56 40.04
Solyc04g074860.2.1 Tomato plasma membrane 46.96 39.37
EER93896 Sorghum cytosol, peroxisome, plasma membrane 42.77 38.93
OQU85978 Sorghum plasma membrane 33.75 38.8
OQU80697 Sorghum cytosol 42.98 38.53
OQU79625 Sorghum golgi, plasma membrane, vacuole 38.78 36.2
OQU92001 Sorghum peroxisome 38.57 34.85
KXG38740 Sorghum plasma membrane 36.06 33.79
CDX69836 Canola plasma membrane 50.94 23.68
Protein Annotations
MapMan:24.2.4.1.1UniProt:C5X311EnsemblPlants:EER96893ProteinID:EER96893ProteinID:EER96893.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF150EnsemblPlantsGene:SORBI_3002G232600TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0001A83697
RefSeq:XP_002460372.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:+:62350142..62353026
Molecular Weight (calculated)
51465.7 Da
IEP (calculated)
7.464
GRAVY (calculated)
0.706
Length
477 amino acids
Sequence
(BLAST)
001: MESQSAVVPL IAELPEKRGG KTLVEEVWEE SKKLWEVTGP AAFTGMVLYS MTIVSQAFAG HLGDRHLAAF SIANTVISGL NFGILLGMAS ALETLCGQAY
101: GAKQYSMMGT YLQRSWLVLL AFAVLLAPTY IFSGQLLMVL GQPAELSREA GLLGMYLLPL HLMFAIQLPL NKFLQCQRKN WVIALSSVLG FPVHVVATWL
201: LAQRFQLGVL GAAMSLNLSW ALITGLQLAY AVGGGCPETW RGFSSSAFMG LKDFVSLSVA SGVMTCLESW YYRLLIFLTA YAKNAELAVD ALSICLSWAG
301: WEMMIHFGFL AGTGVRVANE LGANNGRAAK FATIVSTTTS FLICLLISSL ALIFHDKLAI LFTSSEAVID AVDGISVLLA LTILLNGIQP VLSGVAVGSG
401: WQALVAYVNI GSYYIIGVPF GVLLAWGFHY GVLGIWVGMI GGTMVQTLIL SFITLRCDWN EEALKASSRM RTWSSSK
Best Arabidopsis Sequence Match ( AT3G26590.1 )
(BLAST)
001: MAKDKDITET LLTAAEERSD LPFLSVDDIP PITTVGGFVR EFNVETKKLW YLAGPAIFTS VNQYSLGAIT QVFAGHISTI ALAAVSVENS VVAGFSFGIM
101: LGMGSALETL CGQAFGAGKL SMLGVYLQRS WVILNVTALI LSLLYIFAAP ILASIGQTAA ISSAAGIFSI YMIPQIFAYA INFPTAKFLQ SQSKIMVMAV
201: ISAVALVIHV PLTWFVIVKL QWGMPGLAVV LNASWCFIDM AQLVYIFSGT CGEAWSGFSW EAFHNLWSFV RLSLASAVML CLEVWYFMAI ILFAGYLKNA
301: EISVAALSIC MNILGWTAMI AIGMNTAVSV RVSNELGANH PRTAKFSLLV AVITSTLIGF IVSMILLIFR DQYPSLFVKD EKVIILVKEL TPILALSIVI
401: NNVQPVLSGV AVGAGWQAVV AYVNIACYYV FGIPFGLLLG YKLNYGVMGI WCGMLTGTVV QTIVLTWMIC KTNWDTEASM AEDRIREWGG EVSEIKQLIN
Arabidopsis Description
DTX29Protein DETOXIFICATION 29 [Source:UniProtKB/Swiss-Prot;Acc:Q38956]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.