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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70471 Canola cytosol, peroxisome, plasma membrane 80.62 85.15
CDY08798 Canola cytosol, peroxisome, plasma membrane 81.88 81.62
CDY14558 Canola plasma membrane 81.25 80.75
CDX81281 Canola plasma membrane 87.19 57.64
AT5G65380.1 Thale cress cytosol, peroxisome, plasma membrane 86.56 57.0
CDY08796 Canola plasma membrane 89.06 52.58
CDY61495 Canola plasma membrane 89.06 52.29
CDY54720 Canola plasma membrane 86.88 49.47
CDY08797 Canola plasma membrane 85.94 48.67
CDX81176 Canola plasma membrane 72.5 47.54
CDX81174 Canola plasma membrane 59.69 47.04
CDY40093 Canola plasma membrane 73.44 46.81
CDX85764 Canola plasma membrane 73.12 46.8
CDX69834 Canola plasma membrane 69.38 46.64
CDX69835 Canola plasma membrane 70.62 46.41
CDX97001 Canola plasma membrane 70.94 46.23
CDX97005 Canola plasma membrane 70.31 46.2
CDX78379 Canola peroxisome, plasma membrane, vacuole 66.25 45.89
CDX78378 Canola plasma membrane 69.06 45.57
CDX81172 Canola plasma membrane 68.75 45.36
CDY40095 Canola plasma membrane 68.75 45.17
GSMUA_Achr3P21260_001 Banana plasma membrane 64.06 44.57
GSMUA_Achr7P11770_001 Banana plasma membrane 59.38 44.29
KRH74515 Soybean cytosol, peroxisome, plasma membrane 67.81 44.2
CDY24250 Canola cytosol, peroxisome, plasma membrane 42.5 42.9
GSMUA_Achr8P18130_001 Banana mitochondrion, plasma membrane, vacuole 64.69 42.42
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 65.31 42.39
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 65.0 42.19
CDY69153 Canola cytosol, peroxisome, plasma membrane 41.56 41.96
Zm00001d027982_P002 Maize cytosol, peroxisome, plasma membrane 63.12 41.56
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 62.81 40.69
GSMUA_Achr7P12820_001 Banana cytosol 55.0 40.65
TraesCS4A01G404500.1 Wheat cytosol, peroxisome, plasma membrane 62.19 40.2
TraesCS4B01G304300.1 Wheat cytosol, peroxisome, plasma membrane 62.19 40.2
TraesCS4D01G302500.1 Wheat cytosol, peroxisome, plasma membrane 62.19 40.2
GSMUA_Achr6P04190_001 Banana plasma membrane 54.06 40.05
CDY33130 Canola cytosol, peroxisome, vacuole 38.44 39.94
CDY19295 Canola cytosol, peroxisome, plasma membrane 37.19 39.14
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 63.44 38.67
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 60.0 38.02
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 56.88 37.84
TraesCS5A01G247900.1 Wheat golgi, peroxisome, plasma membrane 55.94 37.6
TraesCS5B01G245500.1 Wheat plasma membrane 55.94 37.53
TraesCS7D01G129700.1 Wheat plasma membrane 55.62 37.01
TraesCS7A01G130300.1 Wheat plasma membrane 55.94 36.83
Os08t0480000-01 Rice plasma membrane 56.25 36.81
Zm00001d050457_P002 Maize plasma membrane 55.31 36.65
Os09t0468000-01 Rice plasma membrane 55.0 36.51
TraesCS7B01G030600.1 Wheat plasma membrane 55.62 36.48
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 55.62 35.96
TraesCS5B01G245400.1 Wheat plasma membrane 51.56 35.03
HORVU5Hr1G069900.5 Barley golgi 55.94 34.96
TraesCS5D01G254400.1 Wheat plasma membrane 50.94 34.61
EER96891 Sorghum cytosol, peroxisome, plasma membrane 52.19 34.36
KXG35815 Sorghum plasma membrane 51.56 34.23
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 55.94 34.23
EER96893 Sorghum cytosol, peroxisome, vacuole 50.0 33.54
CDX93794 Canola plasma membrane 49.69 32.25
CDY06731 Canola cytosol, peroxisome, plasma membrane 45.31 29.96
CDY17070 Canola cytosol, peroxisome, plasma membrane 45.31 29.96
CDY38453 Canola plasma membrane 37.19 29.9
CDX92916 Canola cytosol, plasma membrane, vacuole 45.0 28.51
CDY33129 Canola cytosol, peroxisome, plasma membrane 45.0 28.51
CDY65669 Canola cytosol, peroxisome, plasma membrane 44.06 28.48
CDY44967 Canola plasma membrane 35.31 28.11
CDY39493 Canola cytosol, peroxisome, plasma membrane 44.06 28.03
CDX83627 Canola cytosol, peroxisome, plasma membrane 43.75 27.83
CDY13643 Canola cytosol, peroxisome, plasma membrane 43.75 27.83
TraesCS5D01G254500.1 Wheat mitochondrion, plasma membrane 26.88 27.83
CDY38631 Canola cytosol, peroxisome, vacuole 44.38 27.73
CDY19294 Canola cytosol, peroxisome, plasma membrane 44.38 27.63
CDY39494 Canola cytosol, peroxisome, plasma membrane 44.38 27.63
CDY49481 Canola plasma membrane 37.19 27.23
CDY64933 Canola plasma membrane 42.81 27.13
CDY21076 Canola cytosol, peroxisome, plasma membrane 43.75 26.98
CDX94432 Canola plasma membrane 42.81 26.81
CDY26602 Canola cytosol, peroxisome, vacuole 43.44 26.78
CDY01224 Canola plasma membrane 28.12 26.71
CDY16041 Canola cytosol, peroxisome, vacuole 43.12 26.59
CDY34598 Canola cytosol, peroxisome, vacuole 43.12 26.59
CDX89406 Canola plasma membrane 42.5 26.56
CDY12916 Canola cytosol, plasma membrane, vacuole 41.25 26.35
CDY19507 Canola cytosol, plasma membrane, vacuole 41.25 26.35
CDY64820 Canola plasma membrane 42.81 26.25
CDY25329 Canola plasma membrane 40.31 25.75
CDY47166 Canola plasma membrane 40.31 25.75
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 43.44 25.6
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 43.44 25.6
CDX76392 Canola plasma membrane 36.25 25.16
CDY34637 Canola plasma membrane 35.62 24.84
CDY34833 Canola plasma membrane 35.62 24.84
CDX94061 Canola peroxisome, plasma membrane, vacuole 39.06 24.65
CDY27434 Canola plasma membrane 38.44 24.5
CDX98711 Canola peroxisome, plasma membrane, vacuole 38.75 24.46
CDX79109 Canola plasma membrane 37.81 24.35
CDY16896 Canola plasma membrane 37.5 24.19
CDX76391 Canola plasma membrane 37.81 24.1
CDX67772 Canola plasma membrane 38.12 24.06
CDX98344 Canola plasma membrane 38.12 24.06
CDY51758 Canola plasma membrane 37.5 24.05
CDX94063 Canola plasma membrane 37.81 23.87
CDX98712 Canola plasma membrane 37.81 23.87
CDY50654 Canola plasma membrane 37.19 23.85
CDY29945 Canola plasma membrane 36.88 23.69
CDY21177 Canola plasma membrane 36.56 23.49
CDX83628 Canola plasma membrane 28.44 23.16
CDY50190 Canola nucleus, peroxisome, plasma membrane 43.44 23.05
CDY27431 Canola plasma membrane 36.25 22.88
CDX92726 Canola nucleus, peroxisome, plasma membrane 42.5 22.74
CDX84047 Canola plasma membrane 48.44 22.02
CDX94064 Canola plasma membrane 28.44 21.98
CDX69836 Canola plasma membrane 70.31 21.93
CDX98713 Canola plasma membrane 30.0 21.1
CDY07257 Canola endoplasmic reticulum, vacuole 20.94 20.49
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 5.62 9.78
CDY33131 Canola golgi, plasma membrane, vacuole 2.5 4.55
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078H8T0UniProt:A0A078H8T0EnsemblPlants:CDY33962ProteinID:CDY33962ProteinID:CDY33962.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00055800001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF80TMHMM:TMhelixUniParc:UPI0004EDE002
SEG:seg:::::
Description
BnaC02g43750DBnaC02g43750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8T0]
Coordinates
chrLK032325:+:163970..165671
Molecular Weight (calculated)
35352.8 Da
IEP (calculated)
7.360
GRAVY (calculated)
0.638
Length
320 amino acids
Sequence
(BLAST)
001: MRGRGEEESE SRVPLLESPN TAKEDGGGLK KRVWVETKKL WQIVGPAIFT RLSAYSMLVI TQAFAGHLGE LELAAISIVN NVIVGFNFGL LLGMASALET
101: LCGQAFGARK YYMLGVYMQR SWIVLFFCCL LLLPTYLFTT PVLKFIGQPD DIAELSGVLS VWAIPLHFAY PLSFPLQRFL QCQLKNHVTA YAAAVSLVVH
201: FLVSWLFVDG LKLGVVGTMA TVSISWWVNV LIILAYTVCG GCPLTWTGFS SEAFTGLWEF LKLSASSGVM LCLENWYYRI LIIMTGNLHN ARIAVDSLSI
301: CMSINGWEMM IPLAFFAGTG
Best Arabidopsis Sequence Match ( AT1G33100.1 )
(BLAST)
001: MAGRGGELTE ALVKKTGREE EDELGMKEKV WIESKKLWVV AAPAIFTRYS TFGVSMVTQA FIGHLGPTEL AAYSITFTIL LRFSNGILLG MAGALGTLCG
101: QAYGAKQYQM LGIYLQRSWI VLTGGTICLM PVFIFAGPIL LALGQEERIV RVARVLALWV IGINFSFVPS FTCQMFLQAQ SKNKIISYVT AVSLGLHVFF
201: SWLLVAHFNF GITGAMTSML IAFWLPIIVQ LLYVTCGGCK DTWRGFSMLA FKDLWPVLKL SLSSGGMLCL ELWYNSVLVL LTGNLKNAEV ALDALAICIS
301: INALEMMIAL GFLAAVSVRV SNELGSGNPK GAKFATLIAV FTSLSIGIVL FFVFLFLRGR ISYIFTTSEA VAAEVADLSP LLAFSILLNS VQPVLSGVAI
401: GAGWQGYVAY VNLACYYLVG IPIGVILGYV VGLQVKGVWI GMLFGIFVQT CVLTVMTLRT DWDQQVSTSL RNINRWVVPE SRDANQISSE E
Arabidopsis Description
DTX20Protein DETOXIFICATION 20 [Source:UniProtKB/Swiss-Prot;Acc:F4HPH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.