Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX97739
CDY30157

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 CDX97739 AT3G16310.1 21798944
AT3G21690.1 CDY30157 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69153 Canola cytosol, peroxisome, plasma membrane 93.69 93.69
CDY33130 Canola cytosol, peroxisome, vacuole 86.75 89.29
CDY19295 Canola cytosol, peroxisome, plasma membrane 83.91 87.5
CDX92916 Canola cytosol, plasma membrane, vacuole 97.48 61.19
CDY33129 Canola cytosol, peroxisome, plasma membrane 94.01 59.01
CDY65669 Canola cytosol, peroxisome, plasma membrane 89.91 57.58
CDY19294 Canola cytosol, peroxisome, plasma membrane 93.06 57.39
CDY39494 Canola cytosol, peroxisome, plasma membrane 93.06 57.39
CDY38631 Canola cytosol, peroxisome, vacuole 92.11 57.03
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 90.54 56.72
CDY39493 Canola cytosol, peroxisome, plasma membrane 89.91 56.66
KRH25385 Soybean plasma membrane 76.66 55.1
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 76.97 50.41
GSMUA_Achr6P00360_001 Banana vacuole 63.09 49.14
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 76.66 48.31
KRH26788 Soybean plasma membrane 75.39 47.42
Solyc12g005850.1.1 Tomato plasma membrane 76.34 47.27
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 75.39 47.14
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 75.08 46.94
KRH56125 Soybean plasma membrane 76.34 46.81
PGSC0003DMT400022543 Potato plasma membrane 76.34 46.18
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 70.98 45.73
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 70.66 45.53
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 74.76 45.49
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 71.29 45.47
KXG37120 Sorghum plasma membrane 72.24 45.35
Zm00001d013809_P002 Maize plasma membrane 70.98 45.27
VIT_12s0059g02160.t01 Wine grape plasma membrane 73.19 45.05
EER91319 Sorghum cytosol, peroxisome, plasma membrane 71.29 44.93
Os03t0572900-01 Rice plasma membrane 70.66 44.8
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 69.72 44.56
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 69.72 44.47
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 69.72 44.38
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 68.77 44.22
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 69.4 44.09
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 71.61 43.99
KXG38133 Sorghum cytosol, peroxisome, vacuole 71.61 43.99
TraesCS3D01G506100.1 Wheat plasma membrane 69.09 43.98
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 70.35 43.81
TraesCSU01G124400.1 Wheat plasma membrane, plastid 69.09 43.8
Zm00001d033063_P001 Maize vacuole 69.09 43.8
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 68.77 43.69
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 68.77 43.69
TraesCS4B01G388800.1 Wheat plasma membrane 68.77 43.69
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 70.66 43.66
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 68.45 43.66
Os03t0571900-01 Rice plasma membrane 71.61 43.65
GSMUA_Achr9P11610_001 Banana plasma membrane 68.14 43.64
TraesCS3A01G499200.1 Wheat plasma membrane 68.45 43.57
TraesCS3B01G562400.2 Wheat plasma membrane 68.45 43.57
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 70.35 43.55
EER91321 Sorghum plasma membrane 68.77 43.51
TraesCS5A01G553200.1 Wheat plasma membrane 68.45 43.49
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 68.45 43.31
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 68.14 43.29
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 69.4 42.8
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 68.45 42.72
Zm00001d021629_P003 Maize plasma membrane 69.09 42.69
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 67.19 42.6
CDY33962 Canola plasma membrane 42.9 42.5
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 68.45 42.3
CDY70471 Canola cytosol, peroxisome, plasma membrane 40.38 42.24
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 70.35 42.23
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 68.14 42.11
EER93896 Sorghum cytosol, peroxisome, plasma membrane 69.4 41.98
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 67.51 41.8
GSMUA_Achr4P23760_001 Banana plasma membrane 60.25 41.52
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 65.93 41.3
TraesCS2A01G222300.1 Wheat plasma membrane 63.09 40.57
CDY08798 Canola cytosol, peroxisome, plasma membrane 41.01 40.5
CDY14558 Canola plasma membrane 41.01 40.37
TraesCS2B01G247700.2 Wheat plasma membrane 62.78 40.37
TraesCS2D01G228200.1 Wheat plasma membrane 62.78 40.37
CDY64933 Canola plasma membrane 64.04 40.2
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 62.46 39.92
HORVU2Hr1G046420.16 Barley plasma membrane 62.15 39.88
TraesCS3B01G485100.1 Wheat plasma membrane 68.45 39.38
CDY12916 Canola cytosol, plasma membrane, vacuole 62.15 39.32
CDY19507 Canola cytosol, plasma membrane, vacuole 62.15 39.32
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 70.03 38.95
CDY64820 Canola plasma membrane 64.04 38.89
CDY25329 Canola plasma membrane 61.2 38.72
CDY47166 Canola plasma membrane 61.2 38.72
Zm00001d006493_P001 Maize plasma membrane 69.09 38.42
CDX76392 Canola plasma membrane 54.57 37.53
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 58.36 37.53
CDY34637 Canola plasma membrane 52.68 36.38
CDY34833 Canola plasma membrane 52.37 36.17
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 56.78 35.29
Zm00001d006494_P004 Maize plasma membrane 62.78 35.1
CDX79109 Canola plasma membrane 54.89 35.01
CDX94061 Canola peroxisome, plasma membrane, vacuole 55.2 34.52
CDX94063 Canola plasma membrane 55.2 34.52
CDX76391 Canola plasma membrane 54.57 34.46
CDY27434 Canola plasma membrane 54.57 34.46
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 74.76 34.45
CDY27431 Canola plasma membrane 54.89 34.32
CDX98712 Canola plasma membrane 54.57 34.12
CDX98711 Canola peroxisome, plasma membrane, vacuole 54.26 33.92
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 38.17 32.7
CDY07257 Canola endoplasmic reticulum, vacuole 31.23 30.28
CDX94064 Canola plasma membrane 39.12 29.95
CDX98713 Canola plasma membrane 42.59 29.67
CDX67772 Canola plasma membrane 46.06 28.8
CDX98344 Canola plasma membrane 45.74 28.6
CDY06731 Canola cytosol, peroxisome, plasma membrane 43.53 28.51
CDY17070 Canola cytosol, peroxisome, plasma membrane 43.53 28.51
CDX69834 Canola plasma membrane 42.59 28.36
CDY26602 Canola cytosol, peroxisome, vacuole 46.37 28.32
CDY16041 Canola cytosol, peroxisome, vacuole 46.06 28.13
CDY21076 Canola cytosol, peroxisome, plasma membrane 46.06 28.13
CDY34598 Canola cytosol, peroxisome, vacuole 45.74 27.94
CDX83627 Canola cytosol, peroxisome, plasma membrane 44.16 27.83
CDY13643 Canola cytosol, peroxisome, plasma membrane 43.85 27.63
CDX81281 Canola plasma membrane 41.96 27.48
CDY38453 Canola plasma membrane 33.75 26.88
CDX81176 Canola plasma membrane 41.01 26.64
CDX93794 Canola plasma membrane 41.01 26.37
CDX97005 Canola plasma membrane 40.06 26.08
CDX83628 Canola plasma membrane 32.18 25.95
CDX69835 Canola plasma membrane 39.75 25.87
CDY40095 Canola plasma membrane 39.75 25.87
CDX78379 Canola peroxisome, plasma membrane, vacuole 37.54 25.76
CDX97001 Canola plasma membrane 39.75 25.66
CDY49481 Canola plasma membrane 35.33 25.63
CDY40093 Canola plasma membrane 40.06 25.3
CDX85764 Canola plasma membrane 39.75 25.2
CDX89406 Canola plasma membrane 40.69 25.2
CDX81174 Canola plasma membrane 32.18 25.12
CDX94432 Canola plasma membrane 40.38 25.05
CDY08796 Canola plasma membrane 41.96 24.54
CDX78378 Canola plasma membrane 37.54 24.54
CDX81172 Canola plasma membrane 37.54 24.54
CDY61495 Canola plasma membrane 41.96 24.4
CDY44967 Canola plasma membrane 30.6 24.13
CDY54720 Canola plasma membrane 42.59 24.02
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 40.69 23.76
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 40.69 23.76
CDY08797 Canola plasma membrane 40.69 22.83
CDY01224 Canola plasma membrane 23.66 22.26
CDY16896 Canola plasma membrane 34.07 21.77
CDY50654 Canola plasma membrane 33.44 21.24
CDY51758 Canola plasma membrane 33.44 21.24
CDY29945 Canola plasma membrane 33.12 21.08
CDY50190 Canola nucleus, peroxisome, plasma membrane 40.06 21.06
CDX92726 Canola nucleus, peroxisome, plasma membrane 39.43 20.9
CDY21177 Canola plasma membrane 32.49 20.68
CDX84047 Canola plasma membrane 39.75 17.9
CDX69836 Canola plasma membrane 40.06 12.38
CDY33131 Canola golgi, plasma membrane, vacuole 0.32 0.57
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 0.32 0.54
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078GCN5UniProt:A0A078GCN5EnsemblPlants:CDY24250ProteinID:CDY24250ProteinID:CDY24250.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00026389001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF188TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0004EE6D98SEG:seg::::
Description
BnaC03g42230DBnaC03g42230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCN5]
Coordinates
chrLK032156:+:9010..10122
Molecular Weight (calculated)
34786.0 Da
IEP (calculated)
5.269
GRAVY (calculated)
0.670
Length
317 amino acids
Sequence
(BLAST)
001: MDSSQNDGVY QQLLQPQLSP LPESSNGELE RVLSDLETPL FPRLRKATMI ESKLLFKLAA PAVVVYMINY LMSMSTQIFS GHLGNLELAA ASLGNTGIQV
101: FAYGLMLGMG SAVETLCGQA FGGRKYDMLG VYLQRSAVLL TLTGVLLTII YVFSKPILLF LGESPEIASA ASIFVYGLIP QIFAYAMNFP IQKFLQAQSI
201: VAPSAYIATG SLFVHLLLSW LAVYKLGWGL LGASLVLSLS WWIIVVAQFV YIVTSERCRE TWRGFSVQAF SGLPSFFKLS AASAVMLCLE TWYFQILVLL
301: AGLLENPELA LDSLSIW
Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)
001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
Arabidopsis Description
DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.