Factsheet for Zm00001d006494_P004

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d038803_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21690.1	Zm00001d008871_P001	AT3G16310.1	21798944
AT3G21690.1	Zm00001d010783_P001	AT3G16310.1	21798944
AT3G21690.1	Zm00001d038803_P001	AT3G16310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97294	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane	82.72	94.56
TraesCS2B01G247700.2	Wheat	plasma membrane	76.72	88.24
TraesCS2D01G228200.1	Wheat	plasma membrane	76.19	87.63
TraesCS2A01G222300.1	Wheat	plasma membrane	76.01	87.42
HORVU2Hr1G046420.16	Barley	plasma membrane	73.37	84.21
Os07t0516600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	73.19	84.18
Zm00001d033061_P002	Maize	cytosol, plasma membrane, vacuole	58.38	67.14
Zm00001d013809_P002	Maize	plasma membrane	58.73	67.0
Zm00001d033063_P001	Maize	vacuole	58.38	66.2
CDY33131	Canola	golgi, plasma membrane, vacuole	20.28	65.34
Zm00001d033062_P001	Maize	cytosol, plasma membrane, plastid	58.55	64.72
Zm00001d021629_P003	Maize	plasma membrane	58.38	64.52
KRH26788	Soybean	plasma membrane	57.32	64.48
Zm00001d013810_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	59.61	64.02
AT3G21690.1	Thale cress	cytosol, peroxisome, plasma membrane	56.61	63.44
Zm00001d013811_P001	Maize	cytosol, peroxisome, plasma membrane	56.26	63.04
CDY24250	Canola	cytosol, peroxisome, plasma membrane	35.1	62.78
VIT_12s0059g02180.t01	Wine grape	cytosol, peroxisome, plasma membrane	55.91	62.52
Solyc07g052380.2.1	Tomato	cytosol, peroxisome, plasma membrane	55.38	62.43
Bra001840.1-P	Field mustard	plasma membrane	50.26	62.36
Bra031297.1-P	Field mustard	cytosol, peroxisome, vacuole	54.85	62.32
CDY39493	Canola	cytosol, peroxisome, plasma membrane	55.2	62.23
CDY65669	Canola	cytosol, peroxisome, plasma membrane	54.32	62.22
CDX92916	Canola	cytosol, plasma membrane, vacuole	55.38	62.18
PGSC0003DMT400065544	Potato	cytosol, peroxisome, plasma membrane	52.91	61.98
CDY69153	Canola	cytosol, peroxisome, plasma membrane	34.57	61.83
Bra031296.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.03	61.78
CDY33129	Canola	cytosol, peroxisome, plasma membrane	55.03	61.78
VIT_12s0059g02160.t01	Wine grape	plasma membrane	56.08	61.75
VIT_12s0059g02220.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	55.03	61.54
Bra023866.1-P	Field mustard	cytosol, peroxisome, plasma membrane	52.73	61.4
CDY33130	Canola	cytosol, peroxisome, vacuole	33.33	61.36
CDY38631	Canola	cytosol, peroxisome, vacuole	55.38	61.33
CDY39494	Canola	cytosol, peroxisome, plasma membrane	55.56	61.28
KRH56125	Soybean	plasma membrane	55.73	61.12
Bra023867.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.44	60.6
CDY19294	Canola	cytosol, peroxisome, plasma membrane	54.85	60.51
Solyc12g005850.1.1	Tomato	plasma membrane	54.5	60.35
CDY19295	Canola	cytosol, peroxisome, plasma membrane	31.57	58.88
Zm00001d006493_P001	Maize	plasma membrane	58.38	58.07
KRH25385	Soybean	plasma membrane	43.56	56.01
PGSC0003DMT400022543	Potato	plasma membrane	51.32	55.53
VIT_12s0059g02230.t01	Wine grape	cytosol, nucleus, plasma membrane	52.91	43.6
Zm00001d053234_P001	Maize	peroxisome	38.62	43.28
Zm00001d027982_P002	Maize	cytosol, peroxisome, plasma membrane	36.68	42.8
Zm00001d005018_P001	Maize	cytosol, peroxisome, plasma membrane	38.1	41.54
Zm00001d050457_P002	Maize	plasma membrane	35.1	41.2
Zm00001d012663_P001	Maize	mitochondrion	36.16	40.12
Zm00001d023277_P001	Maize	cytosol, peroxisome, plasma membrane	37.04	39.4
Zm00001d033296_P002	Maize	plasma membrane	34.39	39.39
Zm00001d030250_P001	Maize	peroxisome	31.57	34.29
Zm00001d049910_P001	Maize	cytosol, peroxisome, plasma membrane	35.27	33.61
Zm00001d051886_P001	Maize	cytosol, peroxisome, plasma membrane	37.57	30.78

Protein Annotations

EntrezGene:100272673	MapMan:24.2.4.1.1	UniProt:A0A1D6EX20	ncoils:Coil	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:MATE_fam	ProteinID:ONM24039.1	ProteinID:ONM24041.1
PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF201	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0004DE8875
EnsemblPlantsGene:Zm00001d006494	EnsemblPlants:Zm00001d006494_P004	EnsemblPlants:Zm00001d006494_T004	SEG:seg	:	:

Description

Protein DETOXIFICATION 40

Coordinates

chr2:+:209827247..209830427

Molecular Weight (calculated)

60920.0 Da

IEP (calculated)

7.688

GRAVY (calculated)

0.644

Length

567 amino acids

Sequence
(BLAST)

001: MMGRTGDGRR RDVDGRLEAL LSGAGGEEPW LRRVALATAL ELRLLAPLAA PAVVVYMLII VMSSTTQIVC GQLGNVQLAA ASLGNNGIQV FAYGIMLGMG
101: SAVETLCGQA YGAEKYEMLG VYLQRSTVLL TATGVPLAAV YALSEPLLLL LGQSPEIAGA AAEFAYGLVP QIFAYAANFP IQKFLQAQSI VAPSAYILAA
201: SFALHVPLSW LAVYGLGLGL LGASLTLSLT WWVLVLGQFA YIVWSPRCRA TWTGFTWAAF ADLPGFAGLS AASAVMLALE VWYFQVLILL AGMLPDPQIA
301: LDSLTVCTSI QSWVFMISVG FNAAASVRVG NELGAGNPRS AAFSAWVVTA LSAFVSGIAG LVTFLLRDKL SYIFTGGEAV SRAVADLCPL LVGTIVLCGI
401: QPVLSEFRPD THPNSSGTTV LHKLIRWRTD LFGLLIFEPS HYTATGSFTF SDAFVLFFFP LVLNFLLTGR RRVMKGVAVG CGWQAMVAYI NVECYYFIGV
501: PLGVLLGFKF GFGIKGLWGG MIGGTLIQTL ALIWITLRTD WNKEVEEARK RLDKWDDTRQ PLVASKE

Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)

001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ

Arabidopsis Description

DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.