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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc03g120880.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 Solyc03g120880.2.1 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 92.45 96.07
GSMUA_Achr6P00360_001 Banana vacuole 65.01 80.34
Solyc12g005850.1.1 Tomato plasma membrane 81.31 79.88
KRH26788 Soybean plasma membrane 77.14 76.98
Bra001840.1-P Field mustard plasma membrane 69.78 76.81
CDY24250 Canola cytosol, peroxisome, plasma membrane 48.31 76.66
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 76.14 75.54
CDY69153 Canola cytosol, peroxisome, plasma membrane 47.51 75.39
CDY39494 Canola cytosol, peroxisome, plasma membrane 76.94 75.29
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 72.76 75.15
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 75.75 75.15
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 75.55 75.1
CDY33130 Canola cytosol, peroxisome, vacuole 45.92 75.0
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 74.35 74.95
CDX92916 Canola cytosol, plasma membrane, vacuole 75.15 74.85
CDY19294 Canola cytosol, peroxisome, plasma membrane 76.14 74.51
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 74.55 74.26
CDY38631 Canola cytosol, peroxisome, vacuole 75.55 74.22
CDY33129 Canola cytosol, peroxisome, plasma membrane 74.35 74.06
CDY33131 Canola golgi, plasma membrane, vacuole 25.84 73.86
CDY65669 Canola cytosol, peroxisome, plasma membrane 72.37 73.54
CDY39493 Canola cytosol, peroxisome, plasma membrane 72.96 72.96
VIT_12s0059g02160.t01 Wine grape plasma membrane 74.55 72.82
EER91319 Sorghum cytosol, peroxisome, plasma membrane 72.56 72.56
KRH56125 Soybean plasma membrane 74.35 72.34
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 74.75 72.17
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 71.57 72.0
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 70.38 71.81
Os03t0572900-01 Rice plasma membrane 71.37 71.8
Zm00001d013809_P002 Maize plasma membrane 70.78 71.63
Zm00001d033063_P001 Maize vacuole 71.17 71.6
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 70.78 71.34
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 70.58 71.29
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 70.18 71.17
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 69.58 71.14
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 69.58 71.14
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 70.38 70.94
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 70.38 70.94
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 69.98 70.83
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 69.98 70.83
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 69.98 70.83
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 70.18 70.74
CDY19295 Canola cytosol, peroxisome, plasma membrane 42.74 70.72
GSMUA_Achr9P11610_001 Banana plasma membrane 69.38 70.51
TraesCS3D01G506100.1 Wheat plasma membrane 69.78 70.48
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 69.78 70.34
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 71.17 70.33
TraesCS3A01G499200.1 Wheat plasma membrane 69.58 70.28
TraesCS3B01G562400.2 Wheat plasma membrane 69.58 70.28
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 70.58 69.88
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 69.58 69.86
KXG38133 Sorghum cytosol, peroxisome, vacuole 71.57 69.77
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 70.97 69.73
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 70.97 69.59
Os03t0571900-01 Rice plasma membrane 71.57 69.23
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 68.39 68.8
Zm00001d021629_P003 Maize plasma membrane 69.78 68.42
Solyc02g032660.2.1 Tomato cytosol, peroxisome, vacuole 68.19 68.06
KXG37120 Sorghum plasma membrane 68.19 67.92
TraesCS4B01G388800.1 Wheat plasma membrane 67.2 67.74
GSMUA_Achr4P23760_001 Banana plasma membrane 61.83 67.61
TraesCSU01G124400.1 Wheat plasma membrane, plastid 67.2 67.6
TraesCS5A01G553200.1 Wheat plasma membrane 67.0 67.54
EER91321 Sorghum plasma membrane 67.2 67.47
KRH25385 Soybean plasma membrane 59.05 67.35
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 70.38 67.05
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 67.59 66.41
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 67.59 66.28
Solyc02g080490.2.1 Tomato cytosol, peroxisome, plasma membrane 66.4 66.27
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 67.79 66.09
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 67.4 66.08
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 65.81 65.42
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 66.4 64.98
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 47.71 64.86
TraesCS2B01G247700.2 Wheat plasma membrane 63.42 64.71
TraesCS2D01G228200.1 Wheat plasma membrane 63.42 64.71
EER93896 Sorghum cytosol, peroxisome, plasma membrane 67.4 64.69
TraesCS2A01G222300.1 Wheat plasma membrane 63.22 64.5
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 62.23 63.1
HORVU2Hr1G046420.16 Barley plasma membrane 61.63 62.75
Zm00001d006493_P001 Maize plasma membrane 69.98 61.75
TraesCS3B01G485100.1 Wheat plasma membrane 67.59 61.71
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 60.04 61.26
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 60.44 59.61
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 65.81 58.07
Zm00001d006494_P004 Maize plasma membrane 62.43 55.38
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 72.17 52.76
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 45.13 47.1
Solyc03g063730.2.1 Tomato plasma membrane 38.37 46.73
Solyc07g008410.2.1 Tomato plasma membrane 44.53 46.67
Solyc05g013470.2.1 Tomato plasma membrane 45.53 45.44
Solyc12g006360.1.1 Tomato plasma membrane 45.33 45.33
Solyc05g013460.2.1 Tomato cytosol, peroxisome, plasma membrane 45.73 44.75
Solyc05g013450.2.1 Tomato cytosol, peroxisome, plasma membrane 45.73 44.66
Solyc12g019320.1.1 Tomato plasma membrane 44.53 44.62
Solyc04g074840.2.1 Tomato plasma membrane 43.94 43.94
Solyc03g025240.1.1 Tomato plasma membrane 34.79 43.86
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 42.74 43.61
Solyc10g051130.1.1 Tomato plasma membrane 40.56 42.68
Solyc03g025190.2.1 Tomato plasma membrane 42.15 41.9
Solyc03g025200.2.1 Tomato plasma membrane 39.56 41.89
Solyc01g109320.2.1 Tomato peroxisome 41.35 41.85
Solyc10g081260.1.1 Tomato plasma membrane 40.16 41.65
Solyc10g080340.1.1 Tomato plasma membrane 41.95 41.62
Solyc01g109310.2.1 Tomato plasma membrane 39.16 41.39
Solyc06g036130.2.1 Tomato plasma membrane 40.95 40.87
Solyc03g025250.2.1 Tomato plasma membrane 39.76 39.92
Solyc08g005880.2.1 Tomato plasma membrane 41.55 39.14
Solyc03g025230.2.1 Tomato plasma membrane 38.77 39.0
Solyc03g025220.2.1 Tomato plasma membrane 38.57 38.42
Solyc04g074860.2.1 Tomato plasma membrane 37.18 32.86
Protein Annotations
EnsemblPlants:Solyc07g052380.2.1EnsemblPlantsGene:Solyc07g052380.2GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF188PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000276B81EUniProt:K4CFD7MapMan:24.2.4.1.1:
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:K4CFD7]
Coordinates
chr7:+:60896677..60900070
Molecular Weight (calculated)
54713.6 Da
IEP (calculated)
6.137
GRAVY (calculated)
0.686
Length
503 amino acids
Sequence
(BLAST)
001: MASSENDVNQ PFIEKSRASD SESSIELESV LLDHSLPRWN RLRQATWIEM KLLFSLAAPA VMVYMINYLM SMSTQIFSGH IGNLELAAAS LGNTGIQIFV
101: YGLMLGMGSA VETLCGQAYG ARKYDMLGVY LQRSTILLVL TGVLLTFVYV FSKPILLFLG QSPEIASAAA IFVYGLIPQI FAYAVNFPIQ KFLQAQSIVA
201: PSAYISAATL VLHLVMSWVA TYKLGLGLLG VSLVLSLSWW MIVIGQFVYI LKSENCNTTW NGFSWKAFSG LPEFFKLSAA SAVMLCLESW YFQIIVLLAG
301: LLENPELTLD SLSICMTICG LVFMISVGFN AAASVRVSNE LGAGHPKSAS FSVRVVTTCS FITSVIAAIL VLTFRDVLSY AFTGGEVVAE AVSDLCPLLA
401: LTLALNGIQP VLSGVAVGCG WQTFVAYVNV GCYYIVGVPL GALLGFYFKL GAKGIWLGMM GGTVMQTVIL IWITIRTDWN KEVEAAQGRL NKWGDKKEPE
501: LKE
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.