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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • plastid 1
  • vacuole 2
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra027174.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 Bra027174.1-P AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69153 Canola cytosol, peroxisome, plasma membrane 62.77 100.0
CDY33129 Canola cytosol, peroxisome, plasma membrane 99.01 99.01
Bra001840.1-P Field mustard plasma membrane 84.75 93.65
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 89.9 90.98
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 87.52 90.76
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 90.3 90.12
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 85.54 86.4
GSMUA_Achr6P00360_001 Banana vacuole 63.96 79.36
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 74.26 74.55
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 71.09 74.17
KRH26788 Soybean plasma membrane 73.86 74.01
Solyc12g005850.1.1 Tomato plasma membrane 73.66 72.66
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 74.65 72.36
KRH56125 Soybean plasma membrane 74.06 72.34
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 72.08 71.79
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 72.08 71.79
EER91319 Sorghum cytosol, peroxisome, plasma membrane 70.89 71.17
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 69.11 70.94
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 71.88 70.76
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 68.91 70.73
Os03t0572900-01 Rice plasma membrane 69.9 70.6
KXG38133 Sorghum cytosol, peroxisome, vacuole 72.08 70.54
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 69.31 70.42
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 70.69 70.14
TraesCS3A01G499200.1 Wheat plasma membrane 69.11 70.08
TraesCS3D01G506100.1 Wheat plasma membrane 69.11 70.08
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 69.11 70.08
Zm00001d013809_P002 Maize plasma membrane 68.91 70.02
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 68.32 69.98
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 68.71 69.96
TraesCS3B01G562400.2 Wheat plasma membrane 68.91 69.88
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 68.71 69.82
Zm00001d033063_P001 Maize vacuole 69.11 69.8
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 70.69 69.73
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 68.71 69.54
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 68.71 69.54
KXG37120 Sorghum plasma membrane 69.5 69.5
GSMUA_Achr9P11610_001 Banana plasma membrane 68.12 69.49
Os03t0571900-01 Rice plasma membrane 71.49 69.42
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 68.32 69.42
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 68.51 69.34
VIT_12s0059g02160.t01 Wine grape plasma membrane 70.3 68.93
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 67.92 68.74
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 69.11 68.7
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 68.12 68.66
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 71.49 68.37
EER91321 Sorghum plasma membrane 67.72 68.26
KRH25385 Soybean plasma membrane 59.6 68.25
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 66.73 67.4
TraesCSU01G124400.1 Wheat plasma membrane, plastid 66.34 67.0
PGSC0003DMT400022543 Potato plasma membrane 69.31 66.79
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 48.91 66.76
TraesCS4B01G388800.1 Wheat plasma membrane 65.94 66.73
Zm00001d021629_P003 Maize plasma membrane 67.72 66.67
TraesCS5A01G553200.1 Wheat plasma membrane 65.74 66.53
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 67.52 66.47
GSMUA_Achr4P23760_001 Banana plasma membrane 60.4 66.3
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 67.33 66.28
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 67.52 66.09
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 66.53 65.62
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 65.35 65.22
EER93896 Sorghum cytosol, peroxisome, plasma membrane 67.52 65.08
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 66.14 64.98
TraesCS2B01G247700.2 Wheat plasma membrane 62.57 64.1
TraesCS2A01G222300.1 Wheat plasma membrane 62.38 63.89
TraesCS2D01G228200.1 Wheat plasma membrane 62.38 63.89
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 61.98 63.1
Bra031776.1-P Field mustard plasma membrane 61.58 63.08
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 61.98 62.48
HORVU2Hr1G046420.16 Barley plasma membrane 60.79 62.15
TraesCS3B01G485100.1 Wheat plasma membrane 67.72 62.07
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 60.0 61.46
Bra028379.1-P Field mustard plasma membrane 60.79 61.28
Bra016823.1-P Field mustard plasma membrane 38.22 61.08
Zm00001d006493_P001 Maize plasma membrane 67.92 60.18
Bra020862.1-P Field mustard plasma membrane 59.41 59.76
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 60.0 59.41
Bra020863.1-P Field mustard plasma membrane 59.6 59.37
Bra038747.1-P Field mustard plasma membrane 42.77 59.34
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 66.34 58.77
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 57.23 58.74
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 58.42 58.19
Zm00001d006494_P004 Maize plasma membrane 61.78 55.03
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 68.91 50.58
Bra025214.1-P Field mustard plasma membrane 40.59 48.93
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 45.35 47.31
Bra003361.1-P Field mustard plasma membrane 47.13 46.94
Bra040003.1-P Field mustard plasma membrane 33.47 46.69
Bra037814.1-P Field mustard plasma membrane 44.16 46.17
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 42.77 45.67
Bra024381.1-P Field mustard plasma membrane 43.37 45.25
Bra006059.1-P Field mustard plasma membrane 43.37 44.97
Bra040000.1-P Field mustard plasma membrane 35.64 44.89
Bra013906.1-P Field mustard plasma membrane 41.78 43.15
Bra009034.1-P Field mustard plasma membrane 36.63 43.12
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 40.2 43.1
Bra040001.1-P Field mustard plasma membrane 41.78 42.8
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 41.78 42.71
Bra019147.1-P Field mustard plasma membrane 41.19 42.62
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 40.79 40.16
Bra024379.1-P Field mustard plasma membrane 44.36 39.44
Bra028589.1-P Field mustard peroxisome 32.08 39.04
Bra006058.1-P Field mustard plasma membrane 40.2 38.59
Bra010453.1-P Field mustard plasma membrane 37.23 38.52
Bra031982.1-P Field mustard plasma membrane 36.83 37.27
Bra036449.1-P Field mustard plasma membrane 36.63 37.15
Bra023633.1-P Field mustard plasma membrane 34.65 36.53
Bra013957.1-P Field mustard plasma membrane 35.45 36.02
Bra013572.1-P Field mustard golgi 56.04 27.58
Protein Annotations
MapMan:24.2.4.1.1EnsemblPlantsGene:Bra031296EnsemblPlants:Bra031296.1EnsemblPlants:Bra031296.1-PGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4ER73InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF188TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000254771FSEG:seg
Description
AT3G21690 (E=5e-246) | MATE efflux family protein
Coordinates
chrA05:-:16216553..16221751
Molecular Weight (calculated)
55105.0 Da
IEP (calculated)
5.898
GRAVY (calculated)
0.710
Length
505 amino acids
Sequence
(BLAST)
001: MDSSQNDGAY QPLLQPQLSP ATESNNSELE RVLSDVETPL FARLRKATMI ESKLLFKLAA PAVIVYMINY LMSMSTQIFS GHLGNLELAA ASLGNTGIQV
101: FAYGLMLGMG SAVETLCGQA FGGRKYDMLG IYLQRSAVLL TLTGVFLTFI YVFSKPFLLF LGESPEIASA ASLFVYGLIP QIFAYAMNFP IQKFLQAQSI
201: VAPSAYIATA TLFVHLLLSW LAVYKLGMGL LGASLVLSLS WWIIVVAQFV YIVTSDRCRE TWRGFSVQAF SGLPSFFKLS AASAVMLCLE TWYFQILVLL
301: AGLLENPELA LDSLSICMTI SGWVFMISVG FNAAISVRVS NELGAGNPKS AAFSVIIVNI YSLITCVILA IIIMVCRDYL SYAFTEGEKV SAAVSDLCPL
401: LAVTLILNGI QPVLSGVAVG CGWQTFVAKV NVGCYYIIGI PLGALFGFYF KYDAKGIWTG MICGTLIQTV ILAWVTFRTD WTKEVEEASK RLDIWSNKKA
501: EVISN
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.