Factsheet for Bra038748.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

plastid 1
vacuole 2
cytosol 1
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98712	Canola	plasma membrane	97.97	95.07
Bra020863.1-P	Field mustard	plasma membrane	89.84	87.18
Bra038747.1-P	Field mustard	plasma membrane	63.82	86.26
Bra020862.1-P	Field mustard	plasma membrane	85.98	84.26
Bra038749.1-P	Field mustard	peroxisome, plasma membrane, vacuole	84.55	82.05
AT4G21910.4	Thale cress	plasma membrane	84.76	81.93
AT4G21903.2	Thale cress	plasma membrane	82.72	78.72
Bra031776.1-P	Field mustard	plasma membrane	63.21	63.08
VIT_10s0116g01880.t01	Wine grape	plasma membrane	64.63	62.48
Bra028379.1-P	Field mustard	plasma membrane	63.21	62.08
Bra027073.1-P	Field mustard	cytosol, plasma membrane, vacuole	62.4	61.28
VIT_10s0116g01870.t01	Wine grape	plastid	63.21	60.98
Solyc02g080480.2.1	Tomato	cytosol, plasma membrane, vacuole	61.38	60.52
KRH11419	Soybean	plasma membrane	59.55	58.02
Bra001840.1-P	Field mustard	plasma membrane	53.46	57.55
Bra016823.1-P	Field mustard	plasma membrane	36.79	57.28
Bra031296.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.74	57.23
PGSC0003DMT400042439	Potato	cytosol, plasma membrane, vacuole	61.18	57.01
Bra031297.1-P	Field mustard	cytosol, peroxisome, vacuole	57.52	56.71
Bra023867.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.5	55.6
Bra023866.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.88	55.44
Bra025214.1-P	Field mustard	plasma membrane	39.23	46.06
Bra040003.1-P	Field mustard	plasma membrane	32.93	44.75
Bra003361.1-P	Field mustard	plasma membrane	43.9	42.6
Bra040000.1-P	Field mustard	plasma membrane	34.55	42.39
Bra015613.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.06	41.74
Bra037814.1-P	Field mustard	plasma membrane	40.04	40.79
Bra024381.1-P	Field mustard	plasma membrane	39.84	40.5
Bra006059.1-P	Field mustard	plasma membrane	40.04	40.45
Bra009034.1-P	Field mustard	plasma membrane	34.96	40.09
Bra024380.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.41	39.96
Bra040001.1-P	Field mustard	plasma membrane	39.84	39.76
Bra013906.1-P	Field mustard	plasma membrane	39.23	39.47
Bra026945.1-P	Field mustard	cytosol, peroxisome, vacuole	37.4	39.07
Bra035477.1-P	Field mustard	peroxisome, plasma membrane, vacuole	39.02	38.87
Bra031982.1-P	Field mustard	plasma membrane	38.41	37.88
Bra019147.1-P	Field mustard	plasma membrane	37.4	37.7
Bra036449.1-P	Field mustard	plasma membrane	38.01	37.55
Bra023633.1-P	Field mustard	plasma membrane	36.38	37.37
Bra013957.1-P	Field mustard	plasma membrane	37.4	37.02
Bra028589.1-P	Field mustard	peroxisome	31.1	36.87
Bra013572.1-P	Field mustard	golgi	76.22	36.55
Bra006058.1-P	Field mustard	plasma membrane	38.62	36.12
Bra010453.1-P	Field mustard	plasma membrane	35.57	35.86
Bra037335.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	35.77	34.31
Bra024379.1-P	Field mustard	plasma membrane	39.43	34.15

Protein Annotations

MapMan:24.2.4.1.1	EnsemblPlantsGene:Bra038748	EnsemblPlants:Bra038748.1	EnsemblPlants:Bra038748.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4FCD0	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR11206	PANTHER:PTHR11206:SF140	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002540D16	:

Description

AT4G21910 (E=7e-238) | MATE efflux family protein

Coordinates

chrA03:-:24293537..24297067

Molecular Weight (calculated)

53488.3 Da

IEP (calculated)

8.218

GRAVY (calculated)

0.712

Length

492 amino acids

Sequence
(BLAST)

001: MVVPIETVER RTDLQRPLVD PTVSERKPHN DVGLESVLTE SSLPYRRRVY LGACIEMKLL FRLARPAILV YLVNSGMSIS ARIFAGHLGS QELAAASLGN
101: SCFFLVYGLM LGMGSAVETL CGQAYGAQRY DMLGIYLQRA TMVLALVGLP MTVLYTFSYP ILLLLGEPKT VSYKGSLYIA GLIPQIFAYA VNFTAQKFLQ
201: AQSVVIPSAY ISGAALLLQI LLTWITVYVM GMGLMGIACV LTISWWVMVV AQALYIKNSQ RFRHTWTGLS SRSFQGLWGF FKLSVGSAVM ICLEMWYSQI
301: LVLLAGLLKD PALSLDSLSI CMAVSALSFM VSVGFNAAAS IRTSNELGAG NPKSALFSTW TATFVSFVIS VAEAVILLAS RDYISYIFTS DADVAKAVSD
401: LCPFLAVTVI LNGIQPVLSG VAVGCGWQAF VAYVNVGCYY VVGIPIGCVL GFTFNLQAKG IWTGMIGGTL MQTLILLYVT YQTDWDKEVN IT

Best Arabidopsis Sequence Match ( AT4G21910.2 )
(BLAST)

001: MEVPSETTNL ADLRRPLVVP VVSERKPPAD VGLGLESVLT ERSLPYRRRV YLGACIEMKL LFRLALPAIL VYLVNSGMGI SARIFAGHLG KNELAAASIG
101: NSCFSLVYGL MLGMGSAVET LCGQAYGAHR YEMLGIYLQR ATIVLALVGL PMTLLYTFSY PILILLGEPK TVSYMGSKYI AGLIPQIFAY AVNFTAQKFL
201: QAQSVVAPSA FISAAALILQ ILLTWITVYV MDMGFMGIAY VLTISWWVIV GSQCFYIAVS PKFRHTWTGL SWRSLQGLWS FFKLSAGSAV MICLEMWYSQ
301: ILVLLAGLLE NPARSLDSLS ICMSISALSF MVSVGFNAAV SVRTSNELGA GNPKSAWFST WTATFVSFVI SVTEALAVIW FRDYVSYIFT EDADVAKAVS
401: DLCPFLAITI ILNGIQPVLS GVAVGCGWQT YVAYVNVGCY YVVGIPVGCI LGFTFDFQAK GIWTGMIGGT LMQTLILLYV TYRTDWDKEV EKARKRLDLW
501: DDKKEPLQN

Arabidopsis Description

MATE efflux family protein [Source:TAIR;Acc:AT4G21910]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.