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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid, vacuole
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 78.72 82.72
AT4G21910.4 Thale cress plasma membrane 81.43 82.71
CDX98712 Canola plasma membrane 79.69 81.26
CDX94063 Canola plasma membrane 79.69 81.26
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 78.72 80.28
CDX98711 Canola peroxisome, plasma membrane, vacuole 78.34 79.88
CDX94061 Canola peroxisome, plasma membrane, vacuole 78.34 79.88
CDX76392 Canola plasma membrane 70.02 78.52
Bra020863.1-P Field mustard plasma membrane 76.98 78.5
CDY27431 Canola plasma membrane 76.79 78.3
AT1G61890.1 Thale cress plasma membrane 60.54 62.48
AT1G11670.1 Thale cress cytosol, peroxisome, plasma membrane 60.35 62.03
VIT_10s0116g01880.t01 Wine grape plasma membrane 60.93 61.89
VIT_10s0116g01870.t01 Wine grape plastid 59.38 60.2
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 58.03 60.12
KRH11419 Soybean plasma membrane 57.45 58.81
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 56.48 57.71
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 57.83 56.63
AT1G33100.1 Thale cress plasma membrane 40.43 42.57
AT1G33110.1 Thale cress plasma membrane 40.62 42.51
AT5G38030.1 Thale cress cytosol, peroxisome, plasma membrane 40.62 42.17
AT1G47530.1 Thale cress cytosol, peroxisome, plasma membrane 39.07 41.74
AT3G59030.1 Thale cress plasma membrane 40.62 41.42
AT1G33090.1 Thale cress plasma membrane 39.27 41.09
AT1G23300.1 Thale cress cytosol, plasma membrane, vacuole 40.81 40.97
AT1G33080.1 Thale cress plasma membrane 38.88 40.69
AT5G65380.1 Thale cress cytosol, peroxisome, plasma membrane 38.1 40.53
AT3G26590.1 Thale cress cytosol, peroxisome, plasma membrane 39.07 40.4
AT5G44050.1 Thale cress plasma membrane 37.91 39.92
AT5G10420.1 Thale cress plasma membrane 37.33 39.47
AT4G25640.2 Thale cress plasma membrane 38.3 38.52
AT1G12950.1 Thale cress cytosol, peroxisome, plasma membrane 38.68 38.31
AT5G17700.2 Thale cress plasma membrane 35.59 37.02
AT4G00350.1 Thale cress cytosol, peroxisome, plasma membrane 38.49 36.72
AT3G03620.2 Thale cress plasma membrane 35.2 36.4
Protein Annotations
MapMan:24.2.4.1.1EntrezGene:6241480ProteinID:AEE84524.1ArrayExpress:AT4G21903EnsemblPlantsGene:AT4G21903RefSeq:AT4G21903
TAIR:AT4G21903RefSeq:AT4G21903-TAIR-GEnsemblPlants:AT4G21903.2TAIR:AT4G21903.2Unigene:At.74352UniProt:F4JKB8
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_fam
RefSeq:NP_001190792.1PFAM:PF01554PO:PO:0000293PANTHER:PTHR11206PANTHER:PTHR11206:SF140TIGRFAMs:TIGR00797
TMHMM:TMhelixUniParc:UPI0001E92F3CSEG:seg:::
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F4JKB8]
Coordinates
chr4:-:11620998..11623797
Molecular Weight (calculated)
56523.0 Da
IEP (calculated)
8.552
GRAVY (calculated)
0.673
Length
517 amino acids
Sequence
(BLAST)
001: MNGSNETVER RIELRRPLVD TEKKLPLEVG LESVLTESSL PYRRRVYLGM CIELKLLLRL ALPAILVYLI NGGMGISARI FAGHLGSTQL AAASIGNSSF
101: SLVYALMLGM GSAVETLCGQ AYGAHRYEML GIYLQRATIV LALVGFPMTI LYTFSYPILL LLGEPKTVSY MGSLYIAGLI PQIFAYAVYF TAQKFLQAQS
201: VVAPSAYISA AALVLQISLT WITVYAMGQG LMGIAYVLTI SWWFIVGAQT FYVITSVRFK DTWTGFSWKS LHGLWSFFKL SAGSAVMICL ELWYTQILVL
301: LAGLLKDPAL SLDSLSICMS ISALSFMVSV GFNAAVSVRT SNELGAGNPK SALFSTWTAT FVSFVISVVE ALVVIASRDN VSYIFTSDAD VAKAVSDLCP
401: FLAVTIILNG IQPVLSGVAV GCGWQTYVAY VNIGCYYIVG IPIGCILGFT FNFQAKGIWT GMIGGTLMQT LILLYVTYQA DWDKEVMLHE IKLKKRESDW
501: ICGTTKSLSR ISNFVMK
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.