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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G33110.1 Thale cress plasma membrane 88.8 88.26
AT1G33090.1 Thale cress plasma membrane 87.58 87.04
CDY44967 Canola plasma membrane 70.88 86.57
Bra040000.1-P Field mustard plasma membrane 70.67 86.53
CDY01224 Canola plasma membrane 58.66 85.46
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 85.95 85.43
Bra040001.1-P Field mustard plasma membrane 85.74 85.4
CDX93794 Canola plasma membrane 85.74 85.4
AT1G33080.1 Thale cress plasma membrane 80.24 79.76
Solyc03g063730.2.1 Tomato plasma membrane 56.42 67.07
PGSC0003DMT400031221 Potato cytosol, plasma membrane, vacuole 63.54 64.2
KRG94951 Soybean plasma membrane 51.73 63.5
VIT_08s0056g00780.t01 Wine grape golgi, peroxisome, plasma membrane 63.34 62.83
KRH64945 Soybean golgi, peroxisome, plasma membrane 62.32 62.45
VIT_08s0056g00890.t01 Wine grape plasma membrane 54.79 62.27
PGSC0003DMT400060876 Potato cytosol, peroxisome, plasma membrane 61.3 61.68
KRH64948 Soybean golgi, peroxisome, plasma membrane 61.3 60.93
TraesCS5A01G349000.1 Wheat plasma membrane 53.36 60.93
Os11t0129000-00 Rice peroxisome, plasma membrane 57.84 60.43
KRG94946 Soybean plasma membrane 60.9 60.4
KRH64943 Soybean plasma membrane 59.27 59.75
KRG94947 Soybean golgi, peroxisome, plasma membrane 60.29 59.68
Solyc10g080340.1.1 Tomato plasma membrane 61.3 59.37
KRH64944 Soybean plasma membrane 51.73 59.21
KRG94953 Soybean golgi, peroxisome, plasma membrane 58.86 58.86
TraesCS5A01G142000.1 Wheat cytosol, peroxisome, plasma membrane 60.29 58.61
KRH64938 Soybean plasma membrane 58.25 58.61
GSMUA_Achr7P21610_001 Banana plasma membrane 57.84 58.56
KRH64942 Soybean golgi, peroxisome, plasma membrane 58.04 58.52
TraesCS5A01G349100.1 Wheat plasma membrane 58.86 58.27
TraesCS5D01G150100.1 Wheat cytosol, peroxisome, plasma membrane 59.67 58.02
Os12t0125800-00 Rice golgi, peroxisome 21.18 57.78
Os11t0126100-01 Rice cytosol, peroxisome, plasma membrane 58.45 57.75
TraesCS5B01G350400.1 Wheat cytosol, plasma membrane, vacuole 57.64 57.52
TraesCS5D01G355500.1 Wheat plasma membrane 58.66 57.48
HORVU5Hr1G086830.4 Barley cytosol, peroxisome, plasma membrane 59.06 57.43
HORVU5Hr1G045360.3 Barley cytosol, peroxisome, plasma membrane 59.27 57.4
TraesCS5B01G350500.1 Wheat plasma membrane 57.84 57.37
Os12t0126000-01 Rice cytosol, peroxisome, plasma membrane 57.64 55.82
CDX84047 Canola plasma membrane 79.23 55.26
VIT_08s0056g00870.t01 Wine grape cytosol, peroxisome, plasma membrane 54.79 55.24
TraesCS4B01G128600.1 Wheat plasma membrane 55.8 54.91
TraesCS4D01G123800.1 Wheat plasma membrane 55.6 54.82
Solyc08g005880.2.1 Tomato plasma membrane 59.47 54.68
EES15585 Sorghum cytosol, peroxisome, plasma membrane 58.45 54.67
Zm00001d005018_P001 Maize cytosol, peroxisome, plasma membrane 57.23 54.04
PGSC0003DMT400011415 Potato plasma membrane 54.99 53.57
EES09180 Sorghum cytosol, peroxisome, plasma membrane 57.64 53.5
Zm00001d023277_P001 Maize cytosol, peroxisome, plasma membrane 58.04 53.47
AT5G65380.1 Thale cress cytosol, peroxisome, plasma membrane 47.86 48.35
AT5G10420.1 Thale cress plasma membrane 48.07 48.26
AT5G44050.1 Thale cress plasma membrane 46.23 46.23
AT1G47530.1 Thale cress cytosol, peroxisome, plasma membrane 43.18 43.8
HORVU0Hr1G010460.2 Barley cytosol 9.37 43.4
AT5G17700.2 Thale cress plasma membrane 43.18 42.66
AT1G11670.1 Thale cress cytosol, peroxisome, plasma membrane 43.58 42.54
AT3G03620.2 Thale cress plasma membrane 42.57 41.8
AT1G61890.1 Thale cress plasma membrane 42.57 41.72
AT3G26590.1 Thale cress cytosol, peroxisome, plasma membrane 41.96 41.2
AT1G23300.1 Thale cress cytosol, plasma membrane, vacuole 43.18 41.16
AT5G38030.1 Thale cress cytosol, peroxisome, plasma membrane 41.75 41.16
AT4G25640.2 Thale cress plasma membrane 42.77 40.86
AT4G21903.2 Thale cress plasma membrane 42.57 40.43
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 41.34 40.12
AT1G12950.1 Thale cress cytosol, peroxisome, plasma membrane 42.16 39.66
AT4G21910.4 Thale cress plasma membrane 40.94 39.49
AT4G00350.1 Thale cress cytosol, peroxisome, plasma membrane 42.16 38.19
AT3G59030.1 Thale cress plasma membrane 38.29 37.08
Protein Annotations
MapMan:24.2.4.1.1EntrezGene:840205EntrezGene:840206ProteinID:AAF31289.1EMBL:AC006424EMBL:AC021045
ProteinID:AEE31563.1ProteinID:AEE31564.1EMBL:AK229005ArrayExpress:AT1G33100EnsemblPlantsGene:AT1G33100RefSeq:AT1G33100
TAIR:AT1G33100RefSeq:AT1G33100-TAIR-GEnsemblPlants:AT1G33100.1TAIR:AT1G33100.1UniProt:F4HPH2GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_famRefSeq:NP_174585.1
RefSeq:NP_174586.2ProteinID:OAP18656.1PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF102TIGRFAMs:TIGR00797
TMHMM:TMhelixUniParc:UPI0001E92AC5SEG:seg:::
Description
DTX20Protein DETOXIFICATION 20 [Source:UniProtKB/Swiss-Prot;Acc:F4HPH2]
Coordinates
chr1:+:11997500..12001421
Molecular Weight (calculated)
53508.6 Da
IEP (calculated)
8.294
GRAVY (calculated)
0.750
Length
491 amino acids
Sequence
(BLAST)
001: MAGRGGELTE ALVKKTGREE EDELGMKEKV WIESKKLWVV AAPAIFTRYS TFGVSMVTQA FIGHLGPTEL AAYSITFTIL LRFSNGILLG MAGALGTLCG
101: QAYGAKQYQM LGIYLQRSWI VLTGGTICLM PVFIFAGPIL LALGQEERIV RVARVLALWV IGINFSFVPS FTCQMFLQAQ SKNKIISYVT AVSLGLHVFF
201: SWLLVAHFNF GITGAMTSML IAFWLPIIVQ LLYVTCGGCK DTWRGFSMLA FKDLWPVLKL SLSSGGMLCL ELWYNSVLVL LTGNLKNAEV ALDALAICIS
301: INALEMMIAL GFLAAVSVRV SNELGSGNPK GAKFATLIAV FTSLSIGIVL FFVFLFLRGR ISYIFTTSEA VAAEVADLSP LLAFSILLNS VQPVLSGVAI
401: GAGWQGYVAY VNLACYYLVG IPIGVILGYV VGLQVKGVWI GMLFGIFVQT CVLTVMTLRT DWDQQVSTSL RNINRWVVPE SRDANQISSE E
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.