Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50654 | Canola | plasma membrane | 88.8 | 88.98 |
| CDY51758 | Canola | plasma membrane | 88.4 | 88.58 |
| Bra031982.1-P | Field mustard | plasma membrane | 88.4 | 88.58 |
| Bra036449.1-P | Field mustard | plasma membrane | 87.0 | 87.35 |
| CDY21177 | Canola | plasma membrane | 86.8 | 87.15 |
| CDY29945 | Canola | plasma membrane | 86.6 | 86.95 |
| AT5G17700.2 | Thale cress | plasma membrane | 75.8 | 76.26 |
| VIT_08s0056g01120.t01 | Wine grape | plasma membrane | 54.4 | 56.08 |
| PGSC0003DMT400072250 | Potato | plasma membrane | 53.4 | 55.05 |
| Solyc10g081260.1.1 | Tomato | plasma membrane | 52.6 | 54.23 |
| VIT_08s0056g01070.t01 | Wine grape | plasma membrane | 51.4 | 52.99 |
| VIT_08s0056g01040.t01 | Wine grape | golgi, peroxisome, plasma membrane | 40.4 | 52.33 |
| VIT_08s0056g01000.t01 | Wine grape | plasma membrane, vacuole | 42.8 | 51.44 |
| VIT_08s0056g01080.t01 | Wine grape | plasma membrane | 51.4 | 50.1 |
| AT1G33100.1 | Thale cress | plasma membrane | 41.8 | 42.57 |
| AT1G33080.1 | Thale cress | plasma membrane | 42.0 | 42.51 |
| AT1G33110.1 | Thale cress | plasma membrane | 42.0 | 42.51 |
| AT1G33090.1 | Thale cress | plasma membrane | 41.0 | 41.5 |
| AT5G44050.1 | Thale cress | plasma membrane | 39.8 | 40.53 |
| AT5G10420.1 | Thale cress | plasma membrane | 39.6 | 40.49 |
| AT5G65380.1 | Thale cress | cytosol, peroxisome, plasma membrane | 39.2 | 40.33 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 38.0 | 37.55 |
| AT1G47530.1 | Thale cress | cytosol, peroxisome, plasma membrane | 36.2 | 37.4 |
| AT5G38030.1 | Thale cress | cytosol, peroxisome, plasma membrane | 36.0 | 36.14 |
| AT4G25640.2 | Thale cress | plasma membrane | 36.4 | 35.41 |
| AT3G26590.1 | Thale cress | cytosol, peroxisome, plasma membrane | 35.4 | 35.4 |
| AT4G21903.2 | Thale cress | plasma membrane | 36.4 | 35.2 |
| AT4G21910.4 | Thale cress | plasma membrane | 35.8 | 35.17 |
| AT1G61890.1 | Thale cress | plasma membrane | 35.2 | 35.13 |
| AT1G23300.1 | Thale cress | cytosol, plasma membrane, vacuole | 36.0 | 34.95 |
| AT3G59030.1 | Thale cress | plasma membrane | 34.8 | 34.32 |
| AT1G11670.1 | Thale cress | cytosol, peroxisome, plasma membrane | 34.0 | 33.8 |
| AT1G12950.1 | Thale cress | cytosol, peroxisome, plasma membrane | 35.2 | 33.72 |
| AT4G00350.1 | Thale cress | cytosol, peroxisome, plasma membrane | 35.2 | 32.47 |
Protein Annotations
| MapMan:24.2.4.1.1 | EntrezGene:821204 | ProteinID:AAF03470.1 | ProteinID:AEE73963.1 | ProteinID:ANM65488.1 | ArrayExpress:AT3G03620 |
| EnsemblPlantsGene:AT3G03620 | RefSeq:AT3G03620 | TAIR:AT3G03620 | RefSeq:AT3G03620-TAIR-G | EnsemblPlants:AT3G03620.2 | Unigene:At.50152 |
| EMBL:BX823254 | UniProt:F4J158 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:MATE_fam | RefSeq:NP_001327451.1 | RefSeq:NP_187012.2 | PFAM:PF01554 | PANTHER:PTHR11206 |
| PANTHER:PTHR11206:SF154 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI000034EF51 | SEG:seg | : |
Description
DTX24Protein DETOXIFICATION 24 [Source:UniProtKB/Swiss-Prot;Acc:F4J158]
Coordinates
chr3:-:873749..876353
Molecular Weight (calculated)
55300.4 Da
IEP (calculated)
5.462
GRAVY (calculated)
0.619
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTQEEMEER LLREGSDAEG QSNNRESIYL RTKVWSEVNK MWRIALPSSL FRMTSFGSII VAQAFIGHSS ELGLAAYALL QSTFIRFLYG LMGGMSSATE
101: TLCGQAYGAE QYHTMGIYLQ RSWIVDMAVT TLFLPFIVLA GPILRLLGQN VEITKTVDEI YPWMIPYVYS LIFTMTIQMY LQAQMRNAIV GVLSTLSLAL
201: DLVVTWWCVS VMGMGIGGAL LGLNVGSWAM VLAEFVYIFG GWCPFTWTGF SIAAFVDLIP MLKLSISSGF MICLEYWYMS ILVLMAGYTK DAKIAISAFS
301: ICQYIYTWEL NICLGFLGAA CVRVANELGK GDAHAVRFSI KVILTISTLM GVIFSALCLA FCGRISYLFS NSDEVSDAVN DLSVILAVSI LLNSIQPILS
401: GVAVGAGMQS IVAVVNLASY YAIGIPLGLI LTYVFHLGVK GLWSGMLAGI AIQTIILCYI IYKTDWELEV KRTCERMKVW SLKPSNEESN PIIREESRSK
101: TLCGQAYGAE QYHTMGIYLQ RSWIVDMAVT TLFLPFIVLA GPILRLLGQN VEITKTVDEI YPWMIPYVYS LIFTMTIQMY LQAQMRNAIV GVLSTLSLAL
201: DLVVTWWCVS VMGMGIGGAL LGLNVGSWAM VLAEFVYIFG GWCPFTWTGF SIAAFVDLIP MLKLSISSGF MICLEYWYMS ILVLMAGYTK DAKIAISAFS
301: ICQYIYTWEL NICLGFLGAA CVRVANELGK GDAHAVRFSI KVILTISTLM GVIFSALCLA FCGRISYLFS NSDEVSDAVN DLSVILAVSI LLNSIQPILS
401: GVAVGAGMQS IVAVVNLASY YAIGIPLGLI LTYVFHLGVK GLWSGMLAGI AIQTIILCYI IYKTDWELEV KRTCERMKVW SLKPSNEESN PIIREESRSK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.