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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21177 Canola plasma membrane 99.6 99.6
Bra031982.1-P Field mustard plasma membrane 92.97 92.79
AT3G03620.2 Thale cress plasma membrane 87.35 87.0
Bra023633.1-P Field mustard plasma membrane 71.69 74.53
Bra013957.1-P Field mustard plasma membrane 73.29 73.44
VIT_08s0056g01120.t01 Wine grape plasma membrane 53.41 54.85
PGSC0003DMT400072250 Potato plasma membrane 52.01 53.4
VIT_08s0056g01070.t01 Wine grape plasma membrane 51.61 52.99
Solyc10g081260.1.1 Tomato plasma membrane 51.41 52.78
VIT_08s0056g01040.t01 Wine grape golgi, peroxisome, plasma membrane 39.96 51.55
VIT_08s0056g01000.t01 Wine grape plasma membrane, vacuole 42.77 51.2
VIT_08s0056g01080.t01 Wine grape plasma membrane 51.81 50.29
Bra040003.1-P Field mustard plasma membrane 33.73 46.41
Bra040000.1-P Field mustard plasma membrane 37.15 46.13
Bra040001.1-P Field mustard plasma membrane 42.97 43.41
Bra009034.1-P Field mustard plasma membrane 37.35 43.36
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 42.77 43.12
Bra006059.1-P Field mustard plasma membrane 41.57 42.51
Bra037814.1-P Field mustard plasma membrane 40.56 41.82
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 39.16 41.23
Bra024381.1-P Field mustard plasma membrane 39.96 41.12
Bra025214.1-P Field mustard plasma membrane 33.13 39.38
Bra028589.1-P Field mustard peroxisome 32.53 39.04
Bra038747.1-P Field mustard plasma membrane 28.31 38.74
Bra006058.1-P Field mustard plasma membrane 40.56 38.4
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 37.55 38.01
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 37.55 37.47
Bra020862.1-P Field mustard plasma membrane 37.55 37.25
Bra013906.1-P Field mustard plasma membrane 36.55 37.22
Bra001840.1-P Field mustard plasma membrane 33.73 36.76
Bra020863.1-P Field mustard plasma membrane 37.35 36.69
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 37.15 36.63
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 35.74 36.55
Bra031776.1-P Field mustard plasma membrane 36.14 36.51
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 37.15 36.49
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 35.14 36.16
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 36.35 36.13
Bra028379.1-P Field mustard plasma membrane 36.14 35.93
Bra010453.1-P Field mustard plasma membrane 34.54 35.25
Bra019147.1-P Field mustard plasma membrane 34.54 35.25
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 35.34 35.2
Bra003361.1-P Field mustard plasma membrane 34.74 34.12
Bra024379.1-P Field mustard plasma membrane 38.76 33.98
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 31.53 33.33
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 33.13 32.16
Bra016823.1-P Field mustard plasma membrane 17.87 28.16
Bra013572.1-P Field mustard golgi 35.94 17.45
Protein Annotations
MapMan:24.2.4.1.1EnsemblPlantsGene:Bra036449EnsemblPlants:Bra036449.1EnsemblPlants:Bra036449.1-PGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4F5U3InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF154TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002540F26SEG:seg
Description
AT3G03620 (E=2e-240) | MATE efflux family protein
Coordinates
chrA07:-:430341..432563
Molecular Weight (calculated)
54711.4 Da
IEP (calculated)
5.751
GRAVY (calculated)
0.667
Length
498 amino acids
Sequence
(BLAST)
001: MSSQGEMEES LLRVGSDAKA QSNSIESLYL RAKVWSEVSK MWRIALPSSL FRMTSFGSII VAQAFIGHSS ELGLAAYALL QSTFIRFLYG LTGGMSSATE
101: TLCGQAYGAE QYHTMGIYLQ RSWIIDIAVT TLFLPFIIFA GPILRLLGQN VDITRTVDEI YPWTIPYVYS LIFTMTMQMY LQAQMRNAIV GVLSVLSLAL
201: DLLVTWWCVS FMGMGIGGAL LGLNVSSWAL VLAEFVYVFG GWCPFTWSGF STAAFVDLIP MLKLSISSGF MICLEYWYLS LLVLMAGYTK DANIAISAFS
301: ICQYIYTLEF NICLGFLGAA CVRVANELGK GDAAAVRFSI KVIITVSTIM GVIFSVLCLA FCGQISYLFT NSKEVSKAVD DLSIILAVSI LLNSIQPVLS
401: GVAVGAGMQS IVAVVNFVSY YAVGIPLGLI LTYVFHLGVK GLWSGMSAGI AIQTAILCYI IYRTDWELEV KKTSERMKAW SIQPSHEDSN PIREDERK
Best Arabidopsis Sequence Match ( AT3G03620.2 )
(BLAST)
001: MSTQEEMEER LLREGSDAEG QSNNRESIYL RTKVWSEVNK MWRIALPSSL FRMTSFGSII VAQAFIGHSS ELGLAAYALL QSTFIRFLYG LMGGMSSATE
101: TLCGQAYGAE QYHTMGIYLQ RSWIVDMAVT TLFLPFIVLA GPILRLLGQN VEITKTVDEI YPWMIPYVYS LIFTMTIQMY LQAQMRNAIV GVLSTLSLAL
201: DLVVTWWCVS VMGMGIGGAL LGLNVGSWAM VLAEFVYIFG GWCPFTWTGF SIAAFVDLIP MLKLSISSGF MICLEYWYMS ILVLMAGYTK DAKIAISAFS
301: ICQYIYTWEL NICLGFLGAA CVRVANELGK GDAHAVRFSI KVILTISTLM GVIFSALCLA FCGRISYLFS NSDEVSDAVN DLSVILAVSI LLNSIQPILS
401: GVAVGAGMQS IVAVVNLASY YAIGIPLGLI LTYVFHLGVK GLWSGMLAGI AIQTIILCYI IYKTDWELEV KRTCERMKVW SLKPSNEESN PIIREESRSK
Arabidopsis Description
DTX24Protein DETOXIFICATION 24 [Source:UniProtKB/Swiss-Prot;Acc:F4J158]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.