Factsheet for Bra038747.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 2
plastid 1
plasma membrane 5
extracellular 1
golgi 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX94064	Canola	plasma membrane	93.96	82.61
CDX98713	Canola	plasma membrane	82.69	66.15
Bra038748.1-P	Field mustard	cytosol, peroxisome, plasma membrane	86.26	63.82
Bra020862.1-P	Field mustard	plasma membrane	87.36	63.35
Bra020863.1-P	Field mustard	plasma membrane	84.89	60.95
Bra038749.1-P	Field mustard	peroxisome, plasma membrane, vacuole	84.07	60.35
Bra001840.1-P	Field mustard	plasma membrane	57.97	46.17
Bra031776.1-P	Field mustard	plasma membrane	62.36	46.04
Bra028379.1-P	Field mustard	plasma membrane	62.91	45.71
VIT_10s0116g01880.t01	Wine grape	plasma membrane	63.46	45.38
Bra027073.1-P	Field mustard	cytosol, plasma membrane, vacuole	62.09	45.11
Solyc02g080480.2.1	Tomato	cytosol, plasma membrane, vacuole	61.81	45.09
VIT_10s0116g01870.t01	Wine grape	plastid	61.54	43.92
KRH11419	Soybean	plasma membrane	59.34	42.77
Bra031296.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.34	42.77
PGSC0003DMT400042439	Potato	cytosol, plasma membrane, vacuole	61.54	42.42
Bra031297.1-P	Field mustard	cytosol, peroxisome, vacuole	57.69	42.08
Bra023867.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.69	42.0
Bra023866.1-P	Field mustard	cytosol, peroxisome, plasma membrane	54.4	40.66
Bra025214.1-P	Field mustard	plasma membrane	45.6	39.62
Bra040003.1-P	Field mustard	plasma membrane	39.01	39.23
Bra040000.1-P	Field mustard	plasma membrane	43.13	39.15
Bra016823.1-P	Field mustard	plasma membrane	33.52	38.61
Bra026945.1-P	Field mustard	cytosol, peroxisome, vacuole	43.41	33.55
Bra015613.1-P	Field mustard	cytosol, peroxisome, plasma membrane	43.68	32.85
Bra003361.1-P	Field mustard	plasma membrane	44.78	32.15
Bra013906.1-P	Field mustard	plasma membrane	43.13	32.11
Bra040001.1-P	Field mustard	plasma membrane	43.13	31.85
Bra006059.1-P	Field mustard	plasma membrane	42.31	31.62
Bra035477.1-P	Field mustard	peroxisome, plasma membrane, vacuole	42.31	31.17
Bra024381.1-P	Field mustard	plasma membrane	41.21	30.99
Bra037814.1-P	Field mustard	plasma membrane	40.93	30.85
Bra009034.1-P	Field mustard	plasma membrane	36.26	30.77
Bra024380.1-P	Field mustard	cytosol, peroxisome, plasma membrane	39.84	30.66
Bra013572.1-P	Field mustard	golgi	86.26	30.6
Bra019147.1-P	Field mustard	plasma membrane	40.66	30.33
Bra010453.1-P	Field mustard	plasma membrane	39.56	29.51
Bra006058.1-P	Field mustard	plasma membrane	41.48	28.71
Bra037335.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	40.11	28.46
Bra031982.1-P	Field mustard	plasma membrane	39.01	28.46
Bra036449.1-P	Field mustard	plasma membrane	38.74	28.31
Bra023633.1-P	Field mustard	plasma membrane	37.09	28.18
Bra013957.1-P	Field mustard	plasma membrane	38.19	27.97
Bra028589.1-P	Field mustard	peroxisome	29.12	25.54
Bra024379.1-P	Field mustard	plasma membrane	39.84	25.53

Protein Annotations

MapMan:24.2.4.1.1	EnsemblPlantsGene:Bra038747	EnsemblPlants:Bra038747.1	EnsemblPlants:Bra038747.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4FCC9	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR11206	PANTHER:PTHR11206:SF140	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002540D17	:

Description

AT4G21903 (E=5e-176) | antiporter/ drug transporter

Coordinates

chrA03:-:24309450..24310813

Molecular Weight (calculated)

39868.4 Da

IEP (calculated)

8.171

GRAVY (calculated)

0.865

Length

364 amino acids

Sequence
(BLAST)

001: MGSAVETLCG QAYGAHRYDM LGIYFQRATI VLALVGLPMT VLYTFSYPIL LVLGEPKMVS YMGSLYIVGL MPQIFAYAVN FTAQKFLQAQ SVVTPSAYIS
101: AAALFLQISL TWMTVNMMGL GLMGIAYVLT ISWWVIVVAQ ILYITSSQRF RHTWTGLSWR SFHGLWSFFK LSVGSAVMIC LEMWYSQILV LLAGLLKEPA
201: LSLDSLSICM SVSALSFMVS VGFNAAASIR TSNELGAGNP RSALFSTWTA TFVSFVISLA EALAVIASRD YISYIFTSDA DVAKAVSDLC PFLAVTIILN
301: GIQPVLSGVA VGCGWQTFVA YVNVGCYYIV GIPVGCILGF TFNFQAKVCF PKTFYGLHML YYLY

Best Arabidopsis Sequence Match ( AT4G21903.1 )
(BLAST)

001: MNGSNETVER RIELRRPLVD TEKKLPLEVG LESVLTESSL PYRRRVYLGM CIELKLLLRL ALPAILVYLI NGGMGISARI FAGHLGSTQL AAASIGNSSF
101: SLVYALMLGM GSAVETLCGQ AYGAHRYEML GIYLQRATIV LALVGFPMTI LYTFSYPILL LLGEPKTVSY MGSLYIAGLI PQIFAYAVYF TAQKFLQAQS
201: VVAPSAYISA AALVLQISLT WITVYAMGQG LMGIAYVLTI SWWFIVGAQT FYVITSVRFK DTWTGFSWKS LHGLWSFFKL SAGSAVMICL ELWYTQILVL
301: LAGLLKDPAL SLDSLSICMS ISALSFMVSV GFNAAVSVRT SNELGAGNPK SALFSTWTAT FVSFVISVVE ALVVIASRDN VSYIFTSDAD VAKAVSDLCP
401: FLAVTIILNG IQPVLSGVAV GCGWQTYVAY VNIGCYYIVG IPIGCILGFT FNFQAKGIWT GMIGGTLMQT LILLYVTYQA DWDKEVEKAR KRLDMWDDKE
501: PLQN

Arabidopsis Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F4JKB8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.