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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27431 Canola plasma membrane 98.82 98.82
CDX76392 Canola plasma membrane 89.15 98.05
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 87.18 89.84
Bra038747.1-P Field mustard plasma membrane 60.95 84.89
Bra020862.1-P Field mustard plasma membrane 83.23 84.06
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 82.05 82.05
AT4G21910.4 Thale cress plasma membrane 81.85 81.53
AT4G21903.2 Thale cress plasma membrane 78.5 76.98
VIT_10s0116g01880.t01 Wine grape plasma membrane 63.51 63.26
Bra031776.1-P Field mustard plasma membrane 61.14 62.88
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 60.95 61.92
Bra028379.1-P Field mustard plasma membrane 60.95 61.68
VIT_10s0116g01870.t01 Wine grape plastid 61.74 61.37
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 59.76 60.48
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 59.37 59.6
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 57.79 58.72
KRH11419 Soybean plasma membrane 58.19 58.42
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 60.55 58.14
Bra001840.1-P Field mustard plasma membrane 52.27 57.99
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 54.83 57.08
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 55.62 56.4
Bra016823.1-P Field mustard plasma membrane 34.52 55.38
Bra025214.1-P Field mustard plasma membrane 37.28 45.11
Bra040003.1-P Field mustard plasma membrane 31.95 44.75
Bra040000.1-P Field mustard plasma membrane 34.71 43.89
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 40.24 42.15
Bra003361.1-P Field mustard plasma membrane 41.81 41.81
Bra009034.1-P Field mustard plasma membrane 35.11 41.49
Bra037814.1-P Field mustard plasma membrane 39.45 41.41
Bra006059.1-P Field mustard plasma membrane 39.65 41.27
Bra040001.1-P Field mustard plasma membrane 39.84 40.97
Bra024381.1-P Field mustard plasma membrane 38.86 40.7
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 39.05 40.08
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 36.49 39.11
Bra013906.1-P Field mustard plasma membrane 37.48 38.85
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 36.09 38.85
Bra019147.1-P Field mustard plasma membrane 36.29 37.7
Bra031982.1-P Field mustard plasma membrane 37.08 37.68
Bra036449.1-P Field mustard plasma membrane 36.69 37.35
Bra023633.1-P Field mustard plasma membrane 35.11 37.16
Bra013572.1-P Field mustard golgi 74.16 36.65
Bra013957.1-P Field mustard plasma membrane 35.9 36.62
Bra028589.1-P Field mustard peroxisome 29.78 36.39
Bra010453.1-P Field mustard plasma membrane 34.91 36.27
Bra006058.1-P Field mustard plasma membrane 37.48 36.12
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 35.5 35.09
Bra024379.1-P Field mustard plasma membrane 37.67 33.63
Protein Annotations
MapMan:24.2.4.1.1EnsemblPlantsGene:Bra020863EnsemblPlants:Bra020863.1EnsemblPlants:Bra020863.1-Pncoils:CoilGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4DWG9InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF140TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002545C2A
Description
AT4G21910 (E=2e-245) | MATE efflux family protein
Coordinates
chrA08:-:11573923..11577075
Molecular Weight (calculated)
54989.8 Da
IEP (calculated)
7.036
GRAVY (calculated)
0.627
Length
507 amino acids
Sequence
(BLAST)
001: MGVSSDTVEK SDLQRPLVDP TNSDPKPPKD VGLESVLTDS SLSCRRRVYL GACIELKVLF RLALPAILVY LVNSGMSISA RIFSGHLGGQ ELAAASLGNS
101: CFFLVYGLML GMGSAVETLC GQAYGAQRYD MLGIYLQRAT IVLALVGLPM TVLYTFSYPI LLILGEPKSV SYKASLYIAG LLPQIFAYAV NFTAQKFLQA
201: QSVVIPSAYI SGAALLLQIL LTWFAVNVMG MGLIGIACVL TVSWWVMVVA QTLYITCNER FKHTWTGLNS RSFQGLWSFF KLSVGSAVMI CLEMWYSQIL
301: VLLAGLLEEP ALSLDCLSIC MAVSALSFMV SVGFNAAASI RTSNELGAGN PKSALFSTWT ATFVSFVISV GEALILMASR DYISYIFTSD ADVAKAVSDL
401: CPYLAVTVIL NGIQPVLSGV AVGCGWQTFV AYVNVGCYYV VGIPIGCVLG FTFNLQAKGI WTGMIGGTLM QTLILLYVTY RTDWDKEVEK AKKRLDMWDD
501: KKDAVQN
Best Arabidopsis Sequence Match ( AT4G21910.3 )
(BLAST)
001: MDVSNETVER TDLRTPLVDP ADTEVKPLPE VGLESVLTES SLSYRRRVYL GACIELKVLF RLALPAILIY LVNSGMGISA RVFAGHVGSQ ELAAASIGNS
101: CFNLVYGLML GMGSAVETLC GQAYGAHRYE MLGIYLQRAT IVLALVGLPM TLLYTFSYPI LILLGEPKTV SYMGSKYIAG LIPQIFAYAV NFTAQKFLQA
201: QSVVAPSAFI SAAALILQIL LTWITVYVMD MGFMGIAYVL TISWWVIVGS QCFYIAVSPK FRHTWTGLSW RSLQGLWSFF KLSAGSAVMI CLEMWYSQIL
301: VLLAGLLENP ARSLDSLSIC MSISALSFMV SVGFNAAVSV RTSNELGAGN PKSAWFSTWT ATFVSFVISV TEALAVIWFR DYVSYIFTED ADVAKAVSDL
401: CPFLAITIIL NGIQPVLSGV AVGCGWQTYV AYVNVGCYYV VGIPVGCILG FTFDFQAKGI WTGMIGGTLM QTLILLYVTY RTDWDKEVEK ARKRLDLWDD
501: KKEPLQN
Arabidopsis Description
MATE efflux family protein [Source:TAIR;Acc:AT4G21910]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.