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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013957.1-P Field mustard plasma membrane 91.44 88.13
AT5G17700.2 Thale cress plasma membrane 89.56 86.32
Bra031982.1-P Field mustard plasma membrane 76.41 73.35
Bra036449.1-P Field mustard plasma membrane 74.53 71.69
VIT_08s0056g01120.t01 Wine grape plasma membrane 55.32 54.64
PGSC0003DMT400072250 Potato plasma membrane 53.86 53.2
Solyc10g081260.1.1 Tomato plasma membrane 53.44 52.78
VIT_08s0056g01040.t01 Wine grape golgi, peroxisome, plasma membrane 42.38 52.59
VIT_08s0056g01070.t01 Wine grape plasma membrane 53.24 52.58
VIT_08s0056g01000.t01 Wine grape plasma membrane, vacuole 43.42 50.0
VIT_08s0056g01080.t01 Wine grape plasma membrane 52.19 48.73
Bra040003.1-P Field mustard plasma membrane 34.03 45.03
Bra009034.1-P Field mustard plasma membrane 39.67 44.29
Bra040000.1-P Field mustard plasma membrane 35.91 42.89
Bra040001.1-P Field mustard plasma membrane 42.8 41.58
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 42.59 41.3
Bra006059.1-P Field mustard plasma membrane 41.75 41.07
Bra037814.1-P Field mustard plasma membrane 40.08 39.75
Bra024381.1-P Field mustard plasma membrane 40.08 39.67
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 38.83 39.32
Bra013906.1-P Field mustard plasma membrane 39.04 38.24
Bra025214.1-P Field mustard plasma membrane 32.99 37.71
Bra028589.1-P Field mustard peroxisome 32.57 37.59
Bra006058.1-P Field mustard plasma membrane 41.13 37.45
Bra038747.1-P Field mustard plasma membrane 28.18 37.09
Bra019147.1-P Field mustard plasma membrane 37.58 36.89
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 37.37 36.38
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 36.33 35.95
Bra020862.1-P Field mustard plasma membrane 37.58 35.86
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 36.95 35.47
Bra010453.1-P Field mustard plasma membrane 36.12 35.45
Bra001840.1-P Field mustard plasma membrane 33.61 35.23
Bra020863.1-P Field mustard plasma membrane 37.16 35.11
Bra031776.1-P Field mustard plasma membrane 35.7 34.69
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 36.53 34.65
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 36.53 34.52
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 35.07 34.5
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 35.91 34.33
Bra028379.1-P Field mustard plasma membrane 35.7 34.13
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 34.86 33.4
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 32.36 32.91
Bra003361.1-P Field mustard plasma membrane 34.66 32.74
Bra024379.1-P Field mustard plasma membrane 38.62 32.57
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 33.61 31.38
Bra016823.1-P Field mustard plasma membrane 19.62 29.75
Bra013572.1-P Field mustard golgi 35.7 16.67
Protein Annotations
MapMan:24.2.4.1.1EnsemblPlantsGene:Bra023633EnsemblPlants:Bra023633.1EnsemblPlants:Bra023633.1-PGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4E4D0InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF154TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002543136SEG:seg
Description
AT5G17700 (E=2e-160) | MATE efflux family protein
Coordinates
chrA02:-:4284104..4286724
Molecular Weight (calculated)
52984.9 Da
IEP (calculated)
8.242
GRAVY (calculated)
0.642
Length
479 amino acids
Sequence
(BLAST)
001: MSGGGGEMEE RLLSGSEIEQ RRESLYLRKK IWSEVKKMWR IALPSTLFRV MSFGCIVVAQ AFIGHNSEMG LAAYALLQST FIRFIYGVMA GMSSATETLC
101: GQAYGAQQYH MMGIYLQRSW IVDTFTATLF VPFIVFAGPI LRLLGQNIEI TKTVDEIYLW VIPYLYSLVF TMTMQMYLQA QMKNAIIGVL STIALVLDIV
201: ATWWFVRVMG MGIHGALLGL NLSSWSVVIA EFVYVFGGWC PHTWTGFSTA AFVDLIPMLK LSISSGFMIC LEYWYMSIIV LMSGYTKDAN IAISAFSICV
301: RVANELGKGD AEAVRFSIKV VLVVSAVIGV ICSALCLAFG GQISYLFSDS HQVSKAVADL SIVLSISILL NIIQPILSGV AIGAGMQSMV AFVNLATYYA
401: IGVPLGFILI NIFHFGVKGL WSGMLAGVGI QTLILSYVIY KTDWEMEVKK TKERMKTWTL KLPSAESSST ISMRDEERK
Best Arabidopsis Sequence Match ( AT5G17700.1 )
(BLAST)
001: MSGGGGEMEE RLLNGSETEQ RRESLYLRKK IWSEVRKMWR IALPSTLFRV MSFGCVVVAQ AFIGHSSETG LAAYALLQST FIRFIYGIMA GMSSATETLC
101: GQAYGAEQYH MMGIYLQRSW IVDTFIATLF VPFIVLAGPI LRLLGQNVVI SETVDEIYPW VIPYLYSIVF TMTMQMYLQA QMKNAIIGIL STLALVLDIA
201: ATWWCVSVMG MGIHGALLGL NISSWSVAIA EFVYVFGGWC PHTWTGFSTA AFLDLIPMLK LSISSGFMLC LEYWYMSIIV LMSGYAKDAN IAISAFSICQ
301: YIYSWEMNIC FGLMGAACVR VANELGKGDA DAVRFSIKVV LVVSAVIGVI CSALCLAFGG QISYLFSDSQ AVSDAVADLS IVLSISILFN IIQPILSGVA
401: IGAGMQSMVA LVNLASYYAI GVPLGVLLVY VFNFGIKGLW SGMLAGVGIQ TLILCYVIYK TDWELEVKKT NERMKTWTLN LPAVQSTTIS TRDEERK
Arabidopsis Description
DTX25Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UJQ3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.