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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64820 Canola plasma membrane 95.25 57.66
AT1G11670.1 Thale cress cytosol, peroxisome, plasma membrane 84.49 53.08
Bra031776.1-P Field mustard plasma membrane 81.96 52.54
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 76.9 48.5
Bra028379.1-P Field mustard plasma membrane 74.05 46.71
Bra001840.1-P Field mustard plasma membrane 61.08 42.23
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 62.97 39.88
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 61.39 39.84
VIT_10s0116g01880.t01 Wine grape plasma membrane 62.97 39.1
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 61.08 38.68
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 61.08 38.22
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 59.49 37.6
VIT_10s0116g01870.t01 Wine grape plastid 60.13 37.25
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 57.28 36.79
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 61.08 36.55
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 57.91 36.09
Bra020862.1-P Field mustard plasma membrane 56.96 35.86
KRH11419 Soybean plasma membrane 56.65 35.45
Bra020863.1-P Field mustard plasma membrane 55.38 34.52
Bra038747.1-P Field mustard plasma membrane 38.61 33.52
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 44.94 30.15
Bra025214.1-P Field mustard plasma membrane 38.29 28.88
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 40.51 26.45
Bra024381.1-P Field mustard plasma membrane 39.24 25.62
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 37.97 25.37
Bra006059.1-P Field mustard plasma membrane 38.29 24.85
Bra037814.1-P Field mustard plasma membrane 37.97 24.84
Bra003361.1-P Field mustard plasma membrane 39.56 24.65
Bra013906.1-P Field mustard plasma membrane 37.97 24.54
Bra040003.1-P Field mustard plasma membrane 27.85 24.31
Bra009034.1-P Field mustard plasma membrane 32.91 24.24
Bra040001.1-P Field mustard plasma membrane 37.34 23.94
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 37.03 23.68
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 37.66 23.2
Bra019147.1-P Field mustard plasma membrane 35.44 22.95
Bra040000.1-P Field mustard plasma membrane 28.48 22.44
Bra010453.1-P Field mustard plasma membrane 33.54 21.72
Bra024379.1-P Field mustard plasma membrane 38.61 21.48
Bra006058.1-P Field mustard plasma membrane 35.44 21.29
Bra023633.1-P Field mustard plasma membrane 29.75 19.62
Bra031982.1-P Field mustard plasma membrane 29.75 18.84
Bra013957.1-P Field mustard plasma membrane 29.43 18.71
Bra028589.1-P Field mustard peroxisome 23.73 18.07
Bra036449.1-P Field mustard plasma membrane 28.16 17.87
Bra013572.1-P Field mustard golgi 50.95 15.69
Protein Annotations
EnsemblPlants:Bra016823.1EnsemblPlants:Bra016823.1-PEnsemblPlantsGene:Bra016823GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0016021GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF140PFAM:PF01554
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI00025463FCUniProt:M4DJZ5MapMan:24.2.4.1.1:
Description
AT1G11670 (E=2e-150) | MATE efflux family protein
Coordinates
chrA08:+:20149124..20150584
Molecular Weight (calculated)
35002.5 Da
IEP (calculated)
7.550
GRAVY (calculated)
0.693
Length
316 amino acids
Sequence
(BLAST)
001: MGSEAAVTAV DNLQQPLLEP TKSEVDFRME SVLTDTHLPY LRRLYFAALI ELKFLFNLAA PAIFVYVINN GMSMLTRIFA GRIGSIQLAA ASLGNSGFNM
101: FTFGLMLGMG SAVETLCGQA HGAHRYEMLG VYLQRSTVVL FLTGLPMTLL FIFSKPLLTS LGEPADVASM ASIFVYGMIP MIFAYVVNFP IQKFLQSPGA
201: SLDNGLNLIH FDIGIFLSWL AVFKLGWGLL GLSVIHSLSW WIIVLAQVLY IKVSPRCRRT WTGFSWKAFD GLWDFFRLSA ASAVMLCLES WYAQILVLLA
301: GLLKNPELAL DSLAIW
Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)
001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
Arabidopsis Description
DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.