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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane, vacuole
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:vacuole
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98711 Canola peroxisome, plasma membrane, vacuole 99.21 99.21
Bra020862.1-P Field mustard plasma membrane 84.81 85.66
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 82.05 84.55
Bra038747.1-P Field mustard plasma membrane 60.35 84.07
AT4G21910.4 Thale cress plasma membrane 84.02 83.69
Bra020863.1-P Field mustard plasma membrane 82.05 82.05
AT4G21903.2 Thale cress plasma membrane 80.28 78.72
Bra031776.1-P Field mustard plasma membrane 61.54 63.29
Bra028379.1-P Field mustard plasma membrane 62.33 63.07
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 61.93 62.67
VIT_10s0116g01880.t01 Wine grape plasma membrane 62.92 62.67
VIT_10s0116g01870.t01 Wine grape plastid 61.54 61.18
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 59.57 60.52
KRH11419 Soybean plasma membrane 58.38 58.61
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 58.19 58.42
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 57.0 57.92
Bra016823.1-P Field mustard plasma membrane 36.09 57.91
Bra001840.1-P Field mustard plasma membrane 52.07 57.77
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 54.64 56.88
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 59.17 56.82
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 55.42 56.2
Bra025214.1-P Field mustard plasma membrane 39.45 47.73
Bra040003.1-P Field mustard plasma membrane 31.95 44.75
Bra003361.1-P Field mustard plasma membrane 43.59 43.59
Bra040000.1-P Field mustard plasma membrane 34.32 43.39
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 41.22 43.18
Bra024381.1-P Field mustard plasma membrane 41.22 43.18
Bra006059.1-P Field mustard plasma membrane 41.22 42.92
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 39.45 42.28
Bra037814.1-P Field mustard plasma membrane 40.24 42.24
Bra013906.1-P Field mustard plasma membrane 40.43 41.92
Bra009034.1-P Field mustard plasma membrane 35.31 41.72
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 38.26 41.19
Bra040001.1-P Field mustard plasma membrane 39.25 40.37
Bra019147.1-P Field mustard plasma membrane 38.46 39.96
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 38.66 39.68
Bra010453.1-P Field mustard plasma membrane 36.88 38.32
Bra028589.1-P Field mustard peroxisome 31.36 38.31
Bra006058.1-P Field mustard plasma membrane 39.45 38.02
Bra013572.1-P Field mustard golgi 76.33 37.72
Bra031982.1-P Field mustard plasma membrane 36.69 37.27
Bra036449.1-P Field mustard plasma membrane 36.49 37.15
Bra023633.1-P Field mustard plasma membrane 34.52 36.53
Bra013957.1-P Field mustard plasma membrane 35.7 36.42
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 36.29 35.87
Bra024379.1-P Field mustard plasma membrane 40.04 35.74
Protein Annotations
EnsemblPlants:Bra038749.1EnsemblPlants:Bra038749.1-PEnsemblPlantsGene:Bra038749GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0016021GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF140PFAM:PF01554
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002540D15UniProt:M4FCD1MapMan:24.2.4.1.1:
Description
AT4G21910 (E=1e-248) | MATE efflux family protein
Coordinates
chrA03:-:24276906..24280339
Molecular Weight (calculated)
55797.1 Da
IEP (calculated)
8.169
GRAVY (calculated)
0.605
Length
507 amino acids
Sequence
(BLAST)
001: MDRSIETAER ILRQPLVDPT DSEPKPLRDV KSLESILTES SLPSRRRLYL GARIEMKLLF RLALPAILVY LLNSGMSIST RIFAGHIGSQ ELAAVSIGNS
101: CFNLVYGLML GMGSAVETLC GQAYGAHRYE MLGIYLQRAT IVLALVGLPM TVLYTFSYPI LILLGEPKTV SYMASLYIVG LIPQIFAFAV NFTAQKFLQA
201: QSVVTPSAYI SGAALLLQIL LTWTTVYVID LGLMGIAYVL TISWWFIVMS QTLYIITSPT FRHTWTGLSW RSFHGLWSFF KLSAGSAVMI CLEMWYSQIL
301: VLLAGLLNDH ALSLDSLSIC MSISGLSFMV SVGFNAAVSV RTSNELGAGN PKSAMFSSWM ATFVSFVISL AEALALMASR DYIGYIFTSD AEVAKAVSEL
401: CPFLAVTILL NGIQPVLSGV AVGCGWQTFV AYVNVGCYYV VGIPIGCVLG FTFNLQAKGI WTGMIGGTLM QTLILLYVTY RTDWDKEVKK ARKRLDMWDD
501: KKEPLLN
Best Arabidopsis Sequence Match ( AT4G21910.3 )
(BLAST)
001: MDVSNETVER TDLRTPLVDP ADTEVKPLPE VGLESVLTES SLSYRRRVYL GACIELKVLF RLALPAILIY LVNSGMGISA RVFAGHVGSQ ELAAASIGNS
101: CFNLVYGLML GMGSAVETLC GQAYGAHRYE MLGIYLQRAT IVLALVGLPM TLLYTFSYPI LILLGEPKTV SYMGSKYIAG LIPQIFAYAV NFTAQKFLQA
201: QSVVAPSAFI SAAALILQIL LTWITVYVMD MGFMGIAYVL TISWWVIVGS QCFYIAVSPK FRHTWTGLSW RSLQGLWSFF KLSAGSAVMI CLEMWYSQIL
301: VLLAGLLENP ARSLDSLSIC MSISALSFMV SVGFNAAVSV RTSNELGAGN PKSAWFSTWT ATFVSFVISV TEALAVIWFR DYVSYIFTED ADVAKAVSDL
401: CPFLAITIIL NGIQPVLSGV AVGCGWQTYV AYVNVGCYYV VGIPVGCILG FTFDFQAKGI WTGMIGGTLM QTLILLYVTY RTDWDKEVEK ARKRLDLWDD
501: KKEPLQN
Arabidopsis Description
MATE efflux family protein [Source:TAIR;Acc:AT4G21910]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.