Factsheet for Bra013572.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
vacuole 5
extracellular 4
golgi 6
plasma membrane 6
endoplasmic reticulum 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79109	Canola	plasma membrane	42.59	87.93
Bra038747.1-P	Field mustard	plasma membrane	30.6	86.26
Bra020862.1-P	Field mustard	plasma membrane	39.77	81.27
Bra038749.1-P	Field mustard	peroxisome, plasma membrane, vacuole	37.72	76.33
Bra038748.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.55	76.22
Bra020863.1-P	Field mustard	plasma membrane	36.65	74.16
Bra028379.1-P	Field mustard	plasma membrane	29.53	60.48
Bra027073.1-P	Field mustard	cytosol, plasma membrane, vacuole	28.95	59.28
Bra031776.1-P	Field mustard	plasma membrane	28.27	58.82
VIT_10s0116g01880.t01	Wine grape	plasma membrane	29.14	58.74
Solyc02g080480.2.1	Tomato	cytosol, plasma membrane, vacuole	28.17	57.92
VIT_10s0116g01870.t01	Wine grape	plastid	28.56	57.45
KRH11419	Soybean	plasma membrane	27.58	56.04
Bra031296.1-P	Field mustard	cytosol, peroxisome, plasma membrane	27.58	56.04
Bra031297.1-P	Field mustard	cytosol, peroxisome, vacuole	26.8	55.11
Bra001840.1-P	Field mustard	plasma membrane	24.46	54.92
PGSC0003DMT400042439	Potato	cytosol, plasma membrane, vacuole	28.17	54.73
Bra023866.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.63	54.0
Bra023867.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.32	54.0
Bra016823.1-P	Field mustard	plasma membrane	15.69	50.95
Bra025214.1-P	Field mustard	plasma membrane	19.49	47.73
Bra040003.1-P	Field mustard	plasma membrane	15.98	45.3
Bra040000.1-P	Field mustard	plasma membrane	17.25	44.14
Bra015613.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.69	41.74
Bra006059.1-P	Field mustard	plasma membrane	19.3	40.66
Bra003361.1-P	Field mustard	plasma membrane	20.08	40.63
Bra040001.1-P	Field mustard	plasma membrane	19.3	40.16
Bra024381.1-P	Field mustard	plasma membrane	18.91	40.08
Bra037814.1-P	Field mustard	plasma membrane	18.81	39.96
Bra035477.1-P	Field mustard	peroxisome, plasma membrane, vacuole	19.1	39.68
Bra024380.1-P	Field mustard	cytosol, peroxisome, plasma membrane	18.13	39.32
Bra026945.1-P	Field mustard	cytosol, peroxisome, vacuole	18.03	39.28
Bra013906.1-P	Field mustard	plasma membrane	18.71	39.26
Bra009034.1-P	Field mustard	plasma membrane	16.28	38.93
Bra019147.1-P	Field mustard	plasma membrane	17.64	37.09
Bra006058.1-P	Field mustard	plasma membrane	19.01	37.07
Bra036449.1-P	Field mustard	plasma membrane	17.45	35.94
Bra023633.1-P	Field mustard	plasma membrane	16.67	35.7
Bra031982.1-P	Field mustard	plasma membrane	17.35	35.67
Bra010453.1-P	Field mustard	plasma membrane	16.96	35.66
Bra013957.1-P	Field mustard	plasma membrane	17.25	35.61
Bra028589.1-P	Field mustard	peroxisome	14.33	35.42
Bra037335.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	17.06	34.11
Bra024379.1-P	Field mustard	plasma membrane	18.42	33.27

Protein Annotations

Gene3D:1.25.40.10	MapMan:16.3.2	MapMan:24.2.4.1.1	Gene3D:3.40.50.11980	EnsemblPlantsGene:Bra013572	EnsemblPlants:Bra013572.1
EnsemblPlants:Bra013572.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:IPR011990	UniProt:M4DAR2	InterPro:MATE_fam	PFAM:PF01554
PFAM:PF16953	PFAM:PF17177	InterPro:PPR_long	InterPro:PRORP_C	PANTHER:PTHR13547	PANTHER:PTHR13547:SF2
TIGRFAMs:TIGR00797	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002545539	SEG:seg	:

Description

AT4G21900 (E=5e-247) | antiporter/ drug transporter/ transporter

Coordinates

chrA01:-:6393895..6404830

Molecular Weight (calculated)

113231.0 Da

IEP (calculated)

7.983

GRAVY (calculated)

0.201

Length

1026 amino acids

Sequence
(BLAST)

0001: MKLLFRLALP AILVYIVNSG MSISARIFAG HIGRKELAAA SIGNSCFSLA YGLMLGMGSA VETLCGQAHG AHRYDMLGIY LQRATIVLAL VGLPLTLLYT
0101: FSYPILVLLG EPKSVSYMAS MYIAALIPQI FAYAVNFTAQ KFLQAQSVVT PSAYISAAAF LLQTVLTWVT VYVMGLGLMG IAYVLTISWW LIVVAQTLYI
0201: TSSQRFRHTW TGLSWRSFQG LWSFFKLSAG SAVMICLEMW YSQILVLLAG LLKDPALSLD SLSICMSISA LSFMVSVGFN AAASVRTSNE LGAGNPKSAL
0301: FSTWMATFVS FVISVVEALA VMVSREYVSY IFTADDEVAK AVSDLCPFLA VTIILNGIQP VLSGVAVGCG WQTFVAYVNV GCYYIVGIPV GCLLGFTFNF
0401: QAKGIWTGMI GGTLMQTLIL LYVTYRTDWD KEYSIKETIV LAIVRIAFSV RPKCLKLVDK RSYKLHSFFA VVTTQLSGSQ DKLVKVSSST LANAKLVTLK
0501: SCAAKFHLCS SMATSDHPRS RHHRDESPTK PNKKKKASHN QEKNLLVSLH SCSKSKNLSA ALSLYDAAIA SGDVRLSQQH FQSLLYLCSA SLGDPSLQTL
0601: AIDRGFQVFE RMVGSGISPN EASVTSMARL AAAKGDGDYA FKVVKDIVAV GGVSVPRLRT YAPALLCYCE RLEAEKGYEV EEHMEASGIV LEEVEISALL
0701: KVSAATGREN KVYRYLHKLR EYVGFVSEET SKVIEEWFCS EKASEVVRIG SDVELLRAAA LKNGGGWHGL GWVGEGKWVV KKGNVSADGE CLSCGEHLAC
0801: VDTNEVETEN FVNSLVALAV ERKAKMNSSE PMEDFSEFQE WLEKHGDYEA ILDGANIGLY QQNFADGGFS LPQLEAVVKE LYSKSGNKKW PLILLHKKRV
0901: NALLENPNHR NVVEEWISND VLYTTPPGSN DDWYWLYAAA KFKCLLVTND EMRDHIFELL STSFFQKWKL RHQVRYTFVK GSLKLEMPPP FSVVIQESEK
1001: GSWHVPITCK DGEESLRNWM CVTRQS

Best Arabidopsis Sequence Match ( AT4G21900.1 )
(BLAST)

001: MKLKKPSLPS SLLCAVPPCL SQIRLLIPRR VRVSSSTFAN AKLVTLRNHT VNLHIYYCSM AGTDNRRSRH DDESPKNPNK KKKGNRNPEK SLLINLHSCS
101: KRKDLSAALA LYDAAITSSD IRLNQQHFQS LLYLCSAFIS DPSLQTVAID RGFQIFDRMV SSGISPNESS VTAVARLAAA KGDGDYAFKL VKDLVAVGGV
201: SVPRLRTYAP ALLCFCDTLE AEKGYEVEDH MDASGIVLEE AEISALLKVS AATGRENKVY RYLQKLRECV GCVSEETSKA IEEWFYGVKA SEVSDNGIGS
301: DIELLRAAVL KNGGGWHGLG WVGEGKWIVK KGNVSSAGKC LSCDEHLACV DTNEVETEDF VNSLVTLAME RKAKMNSCEP MADFSEFQEW LEKHGDYEAI
401: LDGANIGLYQ QNFADGGFSL PQLEAVVKEL YNKSGSKKQP LILLHKKRVN ALLENPNHRN LVEEWINNNV LYATPPGSND DWYWLYAAAK LKCLLVTNDE
501: MRDHIFELLS NSFFQKWKER HQVRFTFVKG CLKLEMPPPF SVVIQESEKG SWHVPITSQD KEESLRSWMC ITRQSS

Arabidopsis Description

PRORP3Proteinaceous RNase P 3 [Source:UniProtKB/Swiss-Prot;Acc:F4JKB6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.