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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, peroxisome, vacuole

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • cytosol 1
  • plasma membrane 2
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, vacuole
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra027174.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 Bra027174.1-P AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38631 Canola cytosol, peroxisome, vacuole 99.8 97.27
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 91.58 93.84
Bra001840.1-P Field mustard plasma membrane 82.77 90.37
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 91.18 89.92
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 90.98 89.9
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 83.37 83.2
GSMUA_Achr6P00360_001 Banana vacuole 64.13 78.62
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 74.95 74.35
KRH26788 Soybean plasma membrane 74.55 73.81
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 71.14 73.35
KRH56125 Soybean plasma membrane 75.75 73.11
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 73.35 72.19
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 73.15 71.99
Solyc12g005850.1.1 Tomato plasma membrane 73.75 71.88
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 74.95 71.78
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 69.94 70.08
EER91319 Sorghum cytosol, peroxisome, plasma membrane 70.54 69.98
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 68.94 69.92
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 69.74 69.74
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 68.74 69.72
KRH25385 Soybean plasma membrane 61.52 69.61
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 69.14 69.42
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 69.14 69.42
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 71.34 69.4
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 68.94 69.35
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 70.74 69.35
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 69.34 69.34
Os03t0572900-01 Rice plasma membrane 69.34 69.2
KXG38133 Sorghum cytosol, peroxisome, vacuole 71.54 69.19
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 68.34 69.17
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 68.94 68.94
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 68.54 68.81
Zm00001d013809_P002 Maize plasma membrane 68.54 68.81
Zm00001d033063_P001 Maize vacuole 68.94 68.8
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 70.54 68.75
GSMUA_Achr9P11610_001 Banana plasma membrane 68.14 68.69
Os03t0571900-01 Rice plasma membrane 71.54 68.65
VIT_12s0059g02160.t01 Wine grape plasma membrane 70.74 68.54
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 68.54 68.54
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 68.74 68.46
KXG37120 Sorghum plasma membrane 69.14 68.32
TraesCS3D01G506100.1 Wheat plasma membrane 68.14 68.27
TraesCS3A01G499200.1 Wheat plasma membrane 67.94 68.07
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 69.14 67.91
TraesCS3B01G562400.2 Wheat plasma membrane 67.74 67.87
EER91321 Sorghum plasma membrane 67.33 67.07
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 70.74 66.86
GSMUA_Achr4P23760_001 Banana plasma membrane 61.52 66.74
Zm00001d021629_P003 Maize plasma membrane 68.14 66.28
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 66.33 66.2
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 67.94 66.08
PGSC0003DMT400022543 Potato plasma membrane 69.34 66.03
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 67.54 65.69
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 67.13 65.43
TraesCSU01G124400.1 Wheat plasma membrane, plastid 65.53 65.4
TraesCS4B01G388800.1 Wheat plasma membrane 65.13 65.13
TraesCS5A01G553200.1 Wheat plasma membrane 64.93 64.93
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 67.13 64.92
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 47.7 64.32
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 64.93 64.03
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 65.73 63.81
EER93896 Sorghum cytosol, peroxisome, plasma membrane 66.73 63.55
Bra031776.1-P Field mustard plasma membrane 62.53 63.29
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 63.33 63.07
Bra016823.1-P Field mustard plasma membrane 39.88 62.97
TraesCS2B01G247700.2 Wheat plasma membrane 62.12 62.88
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 62.12 62.5
TraesCS2A01G222300.1 Wheat plasma membrane 61.72 62.47
TraesCS2D01G228200.1 Wheat plasma membrane 61.72 62.47
TraesCS3B01G485100.1 Wheat plasma membrane 68.54 62.07
Bra028379.1-P Field mustard plasma membrane 61.52 61.28
HORVU2Hr1G046420.16 Barley plasma membrane 60.52 61.13
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 59.72 60.45
Zm00001d006493_P001 Maize plasma membrane 68.34 59.82
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 60.52 59.22
Bra020862.1-P Field mustard plasma membrane 59.32 58.96
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 66.13 57.89
Bra020863.1-P Field mustard plasma membrane 58.72 57.79
Bra038747.1-P Field mustard plasma membrane 42.08 57.69
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 56.71 57.52
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 57.92 57.0
Zm00001d006494_P004 Maize plasma membrane 62.32 54.85
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 69.74 50.58
Bra025214.1-P Field mustard plasma membrane 41.88 49.88
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 46.69 48.14
Bra003361.1-P Field mustard plasma membrane 47.29 46.55
Bra040003.1-P Field mustard plasma membrane 33.67 46.41
Bra037814.1-P Field mustard plasma membrane 43.49 44.93
Bra040000.1-P Field mustard plasma membrane 36.07 44.89
Bra024381.1-P Field mustard plasma membrane 43.29 44.63
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 42.08 44.4
Bra006059.1-P Field mustard plasma membrane 43.09 44.15
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 41.28 43.74
Bra013906.1-P Field mustard plasma membrane 42.69 43.56
Bra009034.1-P Field mustard plasma membrane 36.87 42.89
Bra040001.1-P Field mustard plasma membrane 42.28 42.8
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 42.28 42.71
Bra019147.1-P Field mustard plasma membrane 40.68 41.6
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 42.08 40.94
Bra010453.1-P Field mustard plasma membrane 37.88 38.73
Bra006058.1-P Field mustard plasma membrane 40.28 38.21
Bra024379.1-P Field mustard plasma membrane 42.89 37.68
Bra036449.1-P Field mustard plasma membrane 37.47 37.55
Bra031982.1-P Field mustard plasma membrane 37.47 37.47
Bra028589.1-P Field mustard peroxisome 31.06 37.35
Bra013957.1-P Field mustard plasma membrane 36.87 37.02
Bra023633.1-P Field mustard plasma membrane 35.47 36.95
Bra013572.1-P Field mustard golgi 55.11 26.8
Protein Annotations
MapMan:24.2.4.1.1EnsemblPlantsGene:Bra031297EnsemblPlants:Bra031297.1EnsemblPlants:Bra031297.1-Pncoils:CoilGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4ER74InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF188TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000254771E
SEG:seg:::::
Description
AT3G21690 (E=5e-229) | MATE efflux family protein
Coordinates
chrA05:-:16208670..16214011
Molecular Weight (calculated)
54219.1 Da
IEP (calculated)
6.271
GRAVY (calculated)
0.739
Length
499 amino acids
Sequence
(BLAST)
001: MDSSQYDGVY QPLLYPPADG TVPLSPSTES SNGELERVLS DVETPLFHRL RKATMIESKL LFKLAAPAVI VYMINYLMSM STQIFSGHLG NLELAAASLG
101: NTGIQIFAYG LMLGMGSAVE TLCGQAFGGR KYEMLGIYLQ RSTVLLTLTG LLLTLIYIFS KPILLFLGES PEIASAASIF VYGLIPQIFA YAVNFPIQKF
201: LQAQSIVAPS AFISTATLFV HLFLSWLAVY KLGMGLLGAS LVLSLSWWII VVAQFVYIVT SERCCQTWRG FSVQAFSGLP SFFKLSAASA VMLCLETWYF
301: QILVLLAGLL ENPELALDSL SICMTISGWV FMISVGFNAA ISVRVSNELG AGNPKSAAFS VIIVNIYSLI TSVILAIVIL ACRDFLSYAF TEGKKVSVAV
401: SDLCPLLALT LVLNGIQPVL SGVAVGCGWQ AFVAKVNVGC YYIIGIPLGG IWTGMICGTL IQTVILAWVT FRTDWTKEVE EASKRLDKWS NKKLEVVPE
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.