Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- cytosol 1
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0200500-01 | |
| Os05t0520100-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G21690.1 | Os01t0200500-01 | AT3G16310.1 | 21798944 |
| AT3G21690.1 | Os05t0520100-00 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033062_P001 | Maize | cytosol, plasma membrane, plastid | 84.62 | 85.77 |
| TraesCS5D01G332300.1 | Wheat | cytosol, peroxisome, plasma membrane | 83.65 | 85.46 |
| KXG38133 | Sorghum | cytosol, peroxisome, vacuole | 84.62 | 85.27 |
| HORVU5Hr1G082890.5 | Barley | cytosol, peroxisome, plasma membrane | 83.27 | 85.24 |
| TraesCS5B01G326600.1 | Wheat | cytosol, peroxisome, plasma membrane | 83.65 | 84.96 |
| TraesCS1B01G037000.1 | Wheat | cytosol, peroxisome, vacuole | 76.54 | 77.58 |
| TraesCS1D01G030400.1 | Wheat | cytosol, peroxisome, plasma membrane | 76.35 | 77.54 |
| TraesCS1A01G029900.1 | Wheat | cytosol, peroxisome, plasma membrane | 76.15 | 77.19 |
| Os03t0570800-01 | Rice | cytosol, peroxisome, plasma membrane | 72.5 | 75.4 |
| Os03t0572900-01 | Rice | plasma membrane | 72.12 | 75.0 |
| CDY33131 | Canola | golgi, plasma membrane, vacuole | 25.38 | 75.0 |
| Bra001840.1-P | Field mustard | plasma membrane | 64.81 | 73.74 |
| KRH26788 | Soybean | plasma membrane | 70.77 | 73.02 |
| CDX92916 | Canola | cytosol, plasma membrane, vacuole | 70.38 | 72.48 |
| TraesCS5A01G326700.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.77 | 72.16 |
| TraesCS3B01G485100.1 | Wheat | plasma membrane | 76.35 | 72.05 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 69.81 | 71.74 |
| CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 43.65 | 71.61 |
| CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 43.65 | 71.61 |
| TraesCS5A01G326300.4 | Wheat | cytosol, plasma membrane, vacuole | 78.46 | 71.58 |
| Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 69.23 | 71.57 |
| Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 68.65 | 71.54 |
| CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 69.42 | 71.49 |
| Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 69.42 | 71.49 |
| VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 69.62 | 71.4 |
| KRH56125 | Soybean | plasma membrane | 70.96 | 71.37 |
| VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 69.42 | 71.2 |
| CDY38631 | Canola | cytosol, peroxisome, vacuole | 69.62 | 70.7 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 65.58 | 70.45 |
| CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 69.04 | 69.84 |
| Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.38 | 69.82 |
| Os03t0571700-01 | Rice | golgi, peroxisome, plasma membrane | 49.62 | 69.73 |
| CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 68.65 | 69.46 |
| CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 65.96 | 69.29 |
| Solyc12g005850.1.1 | Tomato | plasma membrane | 68.08 | 69.14 |
| CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 66.73 | 68.99 |
| CDY33130 | Canola | cytosol, peroxisome, vacuole | 40.77 | 68.83 |
| Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.19 | 67.8 |
| VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 67.12 | 67.77 |
| CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 39.42 | 67.43 |
| KRH25385 | Soybean | plasma membrane | 56.92 | 67.12 |
| Os07t0516600-01 | Rice | endoplasmic reticulum, peroxisome, plasma membrane | 61.15 | 64.5 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 63.27 | 62.79 |
| VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 65.77 | 49.71 |
| Os12t0615700-01 | Rice | plasma membrane | 44.62 | 46.4 |
| Os03t0626700-01 | Rice | golgi, plasma membrane, vacuole | 41.35 | 45.07 |
| Os08t0562800-01 | Rice | peroxisome, plasma membrane, vacuole | 38.46 | 44.35 |
| Os11t0129000-00 | Rice | peroxisome, plasma membrane | 40.0 | 44.26 |
| Os08t0480000-01 | Rice | plasma membrane | 41.35 | 43.97 |
| Os10t0195000-01 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 39.23 | 43.97 |
| Os09t0468000-01 | Rice | plasma membrane | 40.19 | 43.36 |
| Os11t0126100-01 | Rice | cytosol, peroxisome, plasma membrane | 41.35 | 43.26 |
| Os08t0550200-01 | Rice | cytosol, peroxisome, plasma membrane | 42.88 | 42.72 |
| Os12t0126000-01 | Rice | cytosol, peroxisome, plasma membrane | 40.58 | 41.62 |
| Os01t0766000-00 | Rice | mitochondrion | 41.92 | 39.93 |
| Os12t0125800-00 | Rice | golgi, peroxisome | 13.46 | 38.89 |
| Os02t0821600-00 | Rice | plasma membrane | 33.08 | 35.03 |
Protein Annotations
| MapMan:24.2.4.1.1 | EntrezGene:4333289 | ProteinID:ABF97209.1 | ProteinID:BAS84993.1 | ncoils:Coil | ProteinID:EEE59385.1 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006855 | GO:GO:0008150 |
| GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:MATE_fam |
| EnsemblPlantsGene:Os03g0571900 | EnsemblPlants:Os03t0571900-01 | PFAM:PF01554 | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF200 | UniProt:Q10HY1 |
| TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI0000DB4E2C | RefSeq:XP_015632220.1 | SEG:seg | : |
Description
phenolics efflux zero 1Similar to transparent testa 12 protein. (Os03t0571900-01)
Coordinates
chr3:-:20793274..20799805
Molecular Weight (calculated)
55799.0 Da
IEP (calculated)
5.010
GRAVY (calculated)
0.731
Length
520 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSVKDAGG GKEEQQQQLE SPLLEAAVSS GGGDGGGGHG VSGELESILG DETVPWARRM WAATGVEMRL MLRLAAPAVL VYMINYLMSM STQIFSGHLG
101: TLELAAASLG NTGIQVFAYG LMLGMGSAVE TLCGQAYGAH KYDMLGVYLQ RSTVLLMATG VPLAVIYAFS RPILVLLGES PEIASAAAVF VYGLVPQIFA
201: YAANFPIQKF MQAQSIMAPS AYISAATLAF HLVLSYLVVY QFGLGLLGAS LMLSISWWVI VVAQFIYIVT SRRCRLTWTG FSMLAFSGLP DFFKLSLASA
301: VMLCLETWYF QILVLIAGLL KDPEMALASL SVCMTISGWV FMISVGFNAA ASVRVSNELG AGNPKSAAFS VVVVTVLSFF LSVVISLVIL LCRDYISYIF
401: TDGEDVATAV SKLTPLLALT LILNGIQPVL SGVAVGCGWQ AFVAYVNVGC YYIVGIPLGC LLGFYFDLGA AGIWSGMIGG TLMQTLILMW VTFRTNWNRE
501: VEEAMKRLNK WEDKTPLLSE
101: TLELAAASLG NTGIQVFAYG LMLGMGSAVE TLCGQAYGAH KYDMLGVYLQ RSTVLLMATG VPLAVIYAFS RPILVLLGES PEIASAAAVF VYGLVPQIFA
201: YAANFPIQKF MQAQSIMAPS AYISAATLAF HLVLSYLVVY QFGLGLLGAS LMLSISWWVI VVAQFIYIVT SRRCRLTWTG FSMLAFSGLP DFFKLSLASA
301: VMLCLETWYF QILVLIAGLL KDPEMALASL SVCMTISGWV FMISVGFNAA ASVRVSNELG AGNPKSAAFS VVVVTVLSFF LSVVISLVIL LCRDYISYIF
401: TDGEDVATAV SKLTPLLALT LILNGIQPVL SGVAVGCGWQ AFVAYVNVGC YYIVGIPLGC LLGFYFDLGA AGIWSGMIGG TLMQTLILMW VTFRTNWNRE
501: VEEAMKRLNK WEDKTPLLSE
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.