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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • plastid 1
  • vacuole 4
  • mitochondrion 1
  • golgi 3
  • plasma membrane 4
  • extracellular 2
  • endoplasmic reticulum 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G068800.1 Wheat plasma membrane 83.44 83.79
TraesCS4B01G070000.1 Wheat plasma membrane 82.39 83.44
TraesCS4A01G245400.1 Wheat plasma membrane 82.6 82.95
TraesCS2A01G534900.1 Wheat golgi, plasma membrane, vacuole 80.5 80.84
TraesCS4B01G070100.1 Wheat plasma membrane 80.08 80.76
TraesCS7D01G384100.1 Wheat golgi, plasma membrane, vacuole 79.87 80.21
TraesCS4D01G068900.1 Wheat plasma membrane 79.45 80.13
TraesCS4A01G245300.1 Wheat plasma membrane 79.45 80.13
EER91211 Sorghum plasma membrane 80.92 78.3
Zm00001d033296_P002 Maize plasma membrane 80.71 77.78
HORVU4Hr1G011690.1 Barley plasma membrane 81.55 74.66
TraesCSU01G150400.1 Wheat plasma membrane 65.83 72.52
HORVU2Hr1G117540.1 Barley plasma membrane 68.76 68.62
Os10t0195000-01 Rice golgi, mitochondrion, plasma membrane, vacuole 66.25 68.1
GSMUA_Achr9P26370_001 Banana plasma membrane 64.78 66.31
GSMUA_Achr5P01870_001 Banana plasma membrane 59.96 60.59
Os01t0766000-00 Rice mitochondrion 65.2 56.96
Solyc10g051130.1.1 Tomato plasma membrane 56.18 56.07
PGSC0003DMT400021339 Potato peroxisome, plasma membrane, vacuole 55.77 55.65
Solyc01g109320.2.1 Tomato peroxisome 57.65 55.33
Solyc01g109310.2.1 Tomato plasma membrane 52.41 52.52
PGSC0003DMT400064838 Potato plasma membrane 51.57 51.68
VIT_18s0001g11760.t01 Wine grape plasma membrane 50.73 50.52
KRH05771 Soybean cytosol, plasma membrane, vacuole 49.06 48.45
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 48.64 47.93
CDY06731 Canola cytosol, peroxisome, plasma membrane 48.64 47.93
KRH15267 Soybean cytosol, plasma membrane, vacuole 48.43 47.83
CDY17070 Canola cytosol, peroxisome, plasma membrane 48.43 47.73
AT1G47530.1 Thale cress cytosol, peroxisome, plasma membrane 48.22 47.52
Os12t0125800-00 Rice golgi, peroxisome 16.56 43.89
Os08t0550200-01 Rice cytosol, peroxisome, plasma membrane 48.01 43.87
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 33.96 43.78
Os08t0562800-01 Rice peroxisome, plasma membrane, vacuole 40.46 42.79
Os09t0468000-01 Rice plasma membrane 43.19 42.74
Os11t0129000-00 Rice peroxisome, plasma membrane 41.93 42.55
Os08t0480000-01 Rice plasma membrane 43.61 42.54
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 44.44 42.4
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 43.4 41.99
Os03t0572900-01 Rice plasma membrane 43.82 41.8
Os03t0571900-01 Rice plasma membrane 45.07 41.35
Os11t0126100-01 Rice cytosol, peroxisome, plasma membrane 42.56 40.85
Os12t0126000-01 Rice cytosol, peroxisome, plasma membrane 42.35 39.84
Os02t0821600-00 Rice plasma membrane 36.69 35.64
Os12t0615700-01 Rice plasma membrane 36.27 34.6
Protein Annotations
MapMan:24.2.4.1.1EntrezGene:4333501ProteinID:AAL31693.1ProteinID:AAR01662.1ProteinID:ABF97717.1ProteinID:BAF12617.1
ProteinID:BAS85349.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
InterPro:MATE_famEnsemblPlantsGene:Os03g0626700EnsemblPlants:Os03t0626700-01PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF181
UniProt:Q75LU9TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI00000A3B8DRefSeq:XP_015628247.1:
Description
Multi antimicrobial extrusion protein MatE family protein. (Os03t0626700-01)
Coordinates
chr3:-:23870233..23876307
Molecular Weight (calculated)
51837.2 Da
IEP (calculated)
8.916
GRAVY (calculated)
0.760
Length
477 amino acids
Sequence
(BLAST)
001: MGKLVSKSWQ ESKLLWHIAF PAILTAVFQF SIGFVTVGFV GHIGQVELAA VTVVENVIEG FAYGVLLGMG SALETLCGQA VGAGQVSMLG VYIQRSWIIC
101: GATAVILTPT YVFTAGILIG LRQPTDIAAV AGTYTRWVIP QLFAYAANFP LQKFFQSQSK VWAMTAISGI ALALHVVLNY IFLTRLGHGL VAAALIGNVT
201: WWLIILAQFI YLVSGCFPEA WKGFSMLAFK NLAAFVKLSL ASAIMLCLEL WYYTAVLILV GLLKDAKLQV DVMSVCINYQ LWTLMVALGF NAAVSVRVSN
301: ELGANRPKAA KFAVAMAVST SAIVGAVFMA VFFIWRTQLP RFFSDDADVV RESAKLGYLL AATIFLNSIQ PVLSGVAIGA GWQSLVAFIN IGCYYLVGIP
401: LGVLFGFKLK LDAMGIWVGM SLGTLLQTAI LAFISFRTKW ERQAMMAEER IREWGGRNDD ALPSTTTPTA DDHNVDR
Best Arabidopsis Sequence Match ( AT3G26590.1 )
(BLAST)
001: MAKDKDITET LLTAAEERSD LPFLSVDDIP PITTVGGFVR EFNVETKKLW YLAGPAIFTS VNQYSLGAIT QVFAGHISTI ALAAVSVENS VVAGFSFGIM
101: LGMGSALETL CGQAFGAGKL SMLGVYLQRS WVILNVTALI LSLLYIFAAP ILASIGQTAA ISSAAGIFSI YMIPQIFAYA INFPTAKFLQ SQSKIMVMAV
201: ISAVALVIHV PLTWFVIVKL QWGMPGLAVV LNASWCFIDM AQLVYIFSGT CGEAWSGFSW EAFHNLWSFV RLSLASAVML CLEVWYFMAI ILFAGYLKNA
301: EISVAALSIC MNILGWTAMI AIGMNTAVSV RVSNELGANH PRTAKFSLLV AVITSTLIGF IVSMILLIFR DQYPSLFVKD EKVIILVKEL TPILALSIVI
401: NNVQPVLSGV AVGAGWQAVV AYVNIACYYV FGIPFGLLLG YKLNYGVMGI WCGMLTGTVV QTIVLTWMIC KTNWDTEASM AEDRIREWGG EVSEIKQLIN
Arabidopsis Description
DTX29Protein DETOXIFICATION 29 [Source:UniProtKB/Swiss-Prot;Acc:Q38956]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.