Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400006495

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 PGSC0003DMT400006495 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 96.07 92.45
CDY24250 Canola cytosol, peroxisome, plasma membrane 50.41 76.97
CDY69153 Canola cytosol, peroxisome, plasma membrane 50.0 76.34
GSMUA_Achr6P00360_001 Banana vacuole 64.05 76.17
CDY33130 Canola cytosol, peroxisome, vacuole 47.73 75.0
KRH26788 Soybean plasma membrane 77.48 74.4
PGSC0003DMT400022543 Potato plasma membrane 79.75 73.66
Bra001840.1-P Field mustard plasma membrane 69.21 73.3
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 75.83 72.39
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 75.41 72.13
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 75.41 71.99
CDX92916 Canola cytosol, plasma membrane, vacuole 74.59 71.49
CDY39494 Canola cytosol, peroxisome, plasma membrane 75.83 71.4
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 71.69 71.25
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 73.35 71.14
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 74.17 71.09
CDY19295 Canola cytosol, peroxisome, plasma membrane 44.63 71.05
CDY33129 Canola cytosol, peroxisome, plasma membrane 73.97 70.89
CDY19294 Canola cytosol, peroxisome, plasma membrane 75.0 70.62
CDY38631 Canola cytosol, peroxisome, vacuole 74.59 70.51
CDY65669 Canola cytosol, peroxisome, plasma membrane 72.11 70.51
VIT_12s0059g02160.t01 Wine grape plasma membrane 74.79 70.29
KRH56125 Soybean plasma membrane 74.79 70.02
CDY39493 Canola cytosol, peroxisome, plasma membrane 72.73 69.98
EER91319 Sorghum cytosol, peroxisome, plasma membrane 72.31 69.58
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 70.66 69.37
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 74.59 69.29
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 71.49 69.2
Zm00001d013809_P002 Maize plasma membrane 70.87 69.01
Os03t0572900-01 Rice plasma membrane 70.66 68.4
Zm00001d033063_P001 Maize vacuole 70.66 68.4
TraesCS3D01G506100.1 Wheat plasma membrane 70.04 68.07
TraesCS3A01G499200.1 Wheat plasma membrane 69.83 67.87
TraesCS3B01G562400.2 Wheat plasma membrane 69.83 67.87
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 68.8 67.68
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 68.8 67.68
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 69.63 67.67
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 69.42 67.61
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 69.21 67.54
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 69.63 67.54
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 69.63 67.54
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 69.21 67.4
GSMUA_Achr9P11610_001 Banana plasma membrane 68.8 67.27
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 69.01 67.2
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 69.21 67.13
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 69.01 66.93
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 68.8 66.47
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 70.25 66.28
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 69.63 66.21
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 68.39 66.2
KXG38133 Sorghum cytosol, peroxisome, vacuole 70.45 66.09
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 69.21 65.94
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 69.63 65.82
Os03t0571900-01 Rice plasma membrane 70.45 65.58
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 71.49 65.53
Zm00001d021629_P003 Maize plasma membrane 69.42 65.5
TraesCS4B01G388800.1 Wheat plasma membrane 67.15 65.13
KRH25385 Soybean plasma membrane 59.3 65.08
TraesCSU01G124400.1 Wheat plasma membrane, plastid 67.15 65.0
TraesCS5A01G553200.1 Wheat plasma membrane 66.94 64.93
PGSC0003DMT400032971 Potato cytosol, peroxisome, plasma membrane 66.94 64.8
KXG37120 Sorghum plasma membrane 67.36 64.55
EER91321 Sorghum plasma membrane 66.53 64.27
GSMUA_Achr4P23760_001 Banana plasma membrane 60.74 63.91
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 69.42 63.64
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 67.36 63.18
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 66.94 63.16
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 66.74 63.09
PGSC0003DMT400042438 Potato cytosol, peroxisome, plasma membrane 66.32 63.06
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 66.74 62.96
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 66.53 62.65
CDY33131 Canola golgi, plasma membrane, vacuole 22.73 62.5
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 64.88 62.06
EER93896 Sorghum cytosol, peroxisome, plasma membrane 66.94 61.83
TraesCS2B01G247700.2 Wheat plasma membrane 62.81 61.66
TraesCS2D01G228200.1 Wheat plasma membrane 62.81 61.66
TraesCS2A01G222300.1 Wheat plasma membrane 62.6 61.46
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 46.28 60.54
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 61.98 60.48
HORVU2Hr1G046420.16 Barley plasma membrane 61.36 60.12
TraesCS3B01G485100.1 Wheat plasma membrane 67.36 59.17
Zm00001d006493_P001 Maize plasma membrane 69.42 58.95
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 59.3 58.22
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 60.33 57.25
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 64.46 54.74
Zm00001d006494_P004 Maize plasma membrane 61.98 52.91
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 75.21 52.91
PGSC0003DMT400005437 Potato cytosol, peroxisome, plasma membrane 45.87 44.49
PGSC0003DMT400047906 Potato cytosol, peroxisome, plasma membrane 46.9 44.16
PGSC0003DMT400074161 Potato plasma membrane 43.18 43.72
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 43.8 43.0
PGSC0003DMT400052553 Potato golgi, plasma membrane, vacuole 43.59 42.12
PGSC0003DMT400021339 Potato peroxisome, plasma membrane, vacuole 41.53 42.05
PGSC0003DMT400031221 Potato cytosol, plasma membrane, vacuole 41.94 41.77
PGSC0003DMT400060876 Potato cytosol, peroxisome, plasma membrane 41.94 41.6
PGSC0003DMT400026355 Potato plasma membrane 42.36 40.67
PGSC0003DMT400005432 Potato plasma membrane 39.67 40.51
PGSC0003DMT400064838 Potato plasma membrane 39.67 40.34
PGSC0003DMT400076953 Potato plasma membrane 41.32 39.53
PGSC0003DMT400026353 Potato plasma membrane 40.7 39.16
PGSC0003DMT400072250 Potato plasma membrane 38.84 38.76
PGSC0003DMT400011415 Potato plasma membrane 36.16 34.72
Protein Annotations
MapMan:24.2.4.1.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
UniProt:M1CE78InterPro:MATE_famPFAM:PF01554EnsemblPlantsGene:PGSC0003DMG400025501PGSC:PGSC0003DMG400025501EnsemblPlants:PGSC0003DMT400065544
PANTHER:PTHR11206PANTHER:PTHR11206:SF188TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI00029685A6SEG:seg
Description
MATE efflux family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400025501]
Coordinates
chr7:+:47024648..47027028
Molecular Weight (calculated)
52757.2 Da
IEP (calculated)
6.739
GRAVY (calculated)
0.663
Length
484 amino acids
Sequence
(BLAST)
001: MASSENDVNQ PFLEKNRGSD SDSSNELETV LLDASLPRWN RLRQATWIEM KLLFSLAAPA VMVYMINYLM SMSTQIFSGH LGNLELAAAS LGNTGIQIFV
101: YGLMLGMGSA VETLCGQAYG ARKYDMLGVY LQRSTILLVL TGVLLTFVYV FSKPILLFLG QSPEIASAAA LFVYGLIPQI FAYAVNFPIQ KFLQAQSIVA
201: PSAYISAATL VLHLVISWVA AYKLGLGLLG VSLVLSLSWW MIVIGQFVYI LKSEKCKTTW NGFSWKAFSG LPEFFKLSAA SAVMLCLESW YFQIIVLLAG
301: LLENPELTLD SLSICVRVSN ELGAGHPKSA SFSVRVVTTC SFIISVIAAI LVLIFRNVIS YAFTGGEVVA EAVSDLCPLL ALTLALNGIQ PVLSGVAVGC
401: GWQTFVAYVN VGCYYIVGVP LGALLGFYFK FGAKGIWLGM MGGTVMQTVI LIWITIRTDW NKEVEAAQGR LNTWGDKKEP ELKE
Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)
001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
Arabidopsis Description
DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.