Factsheet for PGSC0003DMT400032971

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:

nucleus 1
vacuole 2
cytosol 1
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g032660.2.1	Tomato	cytosol, peroxisome, vacuole	96.8	96.03
PGSC0003DMT400042438	Potato	cytosol, peroxisome, plasma membrane	81.8	80.35
VIT_10s0116g01860.t01	Wine grape	plasma membrane	70.2	69.64
PGSC0003DMT400065544	Potato	cytosol, peroxisome, plasma membrane	64.8	66.94
PGSC0003DMT400042439	Potato	cytosol, plasma membrane, vacuole	67.4	63.83
PGSC0003DMT400022543	Potato	plasma membrane	63.8	60.88
PGSC0003DMT400074161	Potato	plasma membrane	44.6	46.65
PGSC0003DMT400047906	Potato	cytosol, peroxisome, plasma membrane	46.6	45.33
PGSC0003DMT400052553	Potato	golgi, plasma membrane, vacuole	44.8	44.71
PGSC0003DMT400031221	Potato	cytosol, plasma membrane, vacuole	42.2	43.42
PGSC0003DMT400041642	Potato	cytosol, plasma membrane, vacuole	42.4	43.0
PGSC0003DMT400005437	Potato	cytosol, peroxisome, plasma membrane	42.4	42.48
PGSC0003DMT400060876	Potato	cytosol, peroxisome, plasma membrane	41.4	42.42
PGSC0003DMT400005432	Potato	plasma membrane	39.2	41.35
PGSC0003DMT400076953	Potato	plasma membrane	41.6	41.11
PGSC0003DMT400026355	Potato	plasma membrane	41.4	41.07
PGSC0003DMT400021339	Potato	peroxisome, plasma membrane, vacuole	39.2	41.0
PGSC0003DMT400026353	Potato	plasma membrane	40.6	40.36
PGSC0003DMT400064838	Potato	plasma membrane	37.8	39.71
PGSC0003DMT400072250	Potato	plasma membrane	37.6	38.76
PGSC0003DMT400011415	Potato	plasma membrane	36.6	36.31

Protein Annotations

EntrezGene:102599668	MapMan:24.2.4.1.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	UniProt:M1AYE2	InterPro:MATE_fam	PFAM:PF01554	EnsemblPlantsGene:PGSC0003DMG400012664
PGSC:PGSC0003DMG400012664	EnsemblPlants:PGSC0003DMT400032971	PANTHER:PTHR11206	PANTHER:PTHR11206:SF188	TIGRFAMs:TIGR00797	TMHMM:TMhelix
UniParc:UPI0002949854	RefSeq:XP_006363107.1	SEG:seg	:	:	:

Description

Multidrug resistance pump [Source:PGSC_GENE;Acc:PGSC0003DMG400012664]

Coordinates

chr2:+:16875918..16882893

Molecular Weight (calculated)

54878.0 Da

IEP (calculated)

6.352

GRAVY (calculated)

0.759

Length

500 amino acids

Sequence
(BLAST)

001: MEPNEPLLES EEPILAEQIS SELEEILSDT SLSRIQRFRR ASVIELRNLF RLAAPSIIVY LLNNVTSMST QIFCGHLGNL ELAAASLGNS GIQLLAYGVM
101: LGMGSAVETL CGQAYGGHKY EMLGIYLQRS TILLMLTGIP LMVAYLFSKP ILILLGQSKK VASAAALFVY GLIPQIFAYA ANFPIQKFLQ AQSIVNPSAY
201: IAAVTLIFHL FLTWLVLYVF NWGLFGGALV LSISWWIVVI AQFVYILWTD RCKKTWSGFS MQAFYGLWDF FTLSLASAVM LCLETWYFQI LILIAGLLPN
301: PEVALDSLAV CTTILGWVFM ISVGFNAAAS VRVSNELGGG HPKSAAFCVV VVTMSSFVIS VVFAILVLLF RHVMSYAFTG GQVIAEAASD LAPLLAISLI
401: LNGVQPVLSG VAVGCGWQAF VAYVNVGCYY VVGIPLGIVL GFYFNLEAKG IWLGMLGGTA MQTIILLWVT FRTDWEKEVE QAKSRLNMWQ NNSKKPLFND

Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)

001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ

Arabidopsis Description

DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [cytosol,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.