Factsheet for PGSC0003DMT400042438

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
vacuole 2
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g080490.2.1	Tomato	cytosol, peroxisome, plasma membrane	94.89	95.83
PGSC0003DMT400032971	Potato	cytosol, peroxisome, plasma membrane	80.35	81.8
VIT_10s0116g01860.t01	Wine grape	plasma membrane	68.57	69.25
PGSC0003DMT400065544	Potato	cytosol, peroxisome, plasma membrane	63.06	66.32
PGSC0003DMT400042439	Potato	cytosol, plasma membrane, vacuole	66.21	63.83
PGSC0003DMT400022543	Potato	plasma membrane	61.1	59.35
PGSC0003DMT400074161	Potato	plasma membrane	43.22	46.03
PGSC0003DMT400047906	Potato	cytosol, peroxisome, plasma membrane	44.99	44.55
PGSC0003DMT400052553	Potato	golgi, plasma membrane, vacuole	42.44	43.11
PGSC0003DMT400005432	Potato	plasma membrane	39.69	42.62
PGSC0003DMT400031221	Potato	cytosol, plasma membrane, vacuole	40.47	42.39
PGSC0003DMT400005437	Potato	cytosol, peroxisome, plasma membrane	41.26	42.08
PGSC0003DMT400060876	Potato	cytosol, peroxisome, plasma membrane	40.27	42.01
PGSC0003DMT400041642	Potato	cytosol, plasma membrane, vacuole	40.27	41.58
PGSC0003DMT400021339	Potato	peroxisome, plasma membrane, vacuole	38.31	40.8
PGSC0003DMT400026355	Potato	plasma membrane	40.27	40.67
PGSC0003DMT400064838	Potato	plasma membrane	37.52	40.13
PGSC0003DMT400026353	Potato	plasma membrane	38.7	39.16
PGSC0003DMT400072250	Potato	plasma membrane	37.13	38.97
PGSC0003DMT400076953	Potato	plasma membrane	38.7	38.93
PGSC0003DMT400011415	Potato	plasma membrane	35.56	35.91

Protein Annotations

EntrezGene:102594665	MapMan:24.2.4.1.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	UniProt:M1BD15	InterPro:MATE_fam	PFAM:PF01554	EnsemblPlantsGene:PGSC0003DMG400016457
PGSC:PGSC0003DMG400016457	EnsemblPlants:PGSC0003DMT400042438	PANTHER:PTHR11206	PANTHER:PTHR11206:SF188	TIGRFAMs:TIGR00797	TMHMM:TMhelix
UniParc:UPI0002961984	RefSeq:XP_006348111.1	SEG:seg	:	:	:

Description

Multidrug resistance pump [Source:PGSC_GENE;Acc:PGSC0003DMG400016457]

Coordinates

chr2:-:36276296..36280081

Molecular Weight (calculated)

55295.1 Da

IEP (calculated)

6.167

GRAVY (calculated)

0.668

Length

509 amino acids

Sequence
(BLAST)

001: MDECFQDKGP SEPLLVLEQK EAAVEHVSSE LEDILSDTRL SHFQRLGRAS AVEFRNLFRL AAPAIIVYLL NNVTSMSTQI FCGHLGNLEL AAASLGNEGI
101: QLLAYGVMLG MGSAVETLCG QAYGAHKYET LGIYLQRSTI LLMLSGIPIM VAYLFSKPIL ILLGESEKVA SAAALFVYGL IPQIFAYAAN FPIQKFLQAQ
201: SIVNPSAYIA AAALVLHLFL TWIVLYVFKW GLFGGAMVLS ISWWIVVVAQ FMYILQSDKC KKTWNGFSSQ AFSGLWDFYK LSAASSVMLC LETWYFQILV
301: LVAGLLPNPE VALDSLAVCN TILGWVFMIA AGFNAAASVR VSNELGAGHP KSASFSVLVV TLSSFVIAVV AAIIVMMFRD VMSYAFTGGE TIAKATSELA
401: PLLAASIILN GIQPVLSGVA VGCGWQGFVA YVNVGCYYVV GIPLGALLGF HFKLEAKGLW LGMFGGTAMQ TLILVWATFS TNWEEEVEKA KNRLVKWQDI
501: IKKPLLNES

Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)

001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ

Arabidopsis Description

DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.