Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 3
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g019320.1.1 | Tomato | plasma membrane | 95.01 | 94.82 |
| PGSC0003DMT400047906 | Potato | cytosol, peroxisome, plasma membrane | 62.08 | 60.51 |
| PGSC0003DMT400021339 | Potato | peroxisome, plasma membrane, vacuole | 43.71 | 45.82 |
| PGSC0003DMT400064838 | Potato | plasma membrane | 43.51 | 45.8 |
| PGSC0003DMT400032971 | Potato | cytosol, peroxisome, plasma membrane | 44.71 | 44.8 |
| PGSC0003DMT400031221 | Potato | cytosol, plasma membrane, vacuole | 42.71 | 44.03 |
| PGSC0003DMT400026355 | Potato | plasma membrane | 44.11 | 43.85 |
| PGSC0003DMT400076953 | Potato | plasma membrane | 44.11 | 43.68 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 42.12 | 43.59 |
| PGSC0003DMT400005437 | Potato | cytosol, peroxisome, plasma membrane | 43.31 | 43.49 |
| PGSC0003DMT400042438 | Potato | cytosol, peroxisome, plasma membrane | 43.11 | 42.44 |
| PGSC0003DMT400041642 | Potato | cytosol, plasma membrane, vacuole | 41.72 | 42.39 |
| PGSC0003DMT400005432 | Potato | plasma membrane | 39.72 | 41.98 |
| PGSC0003DMT400026353 | Potato | plasma membrane | 42.12 | 41.95 |
| PGSC0003DMT400060876 | Potato | cytosol, peroxisome, plasma membrane | 40.72 | 41.8 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 42.32 | 40.46 |
| PGSC0003DMT400042439 | Potato | cytosol, plasma membrane, vacuole | 41.92 | 39.77 |
| PGSC0003DMT400072250 | Potato | plasma membrane | 37.52 | 38.76 |
| PGSC0003DMT400074161 | Potato | plasma membrane | 35.73 | 37.45 |
| PGSC0003DMT400011415 | Potato | plasma membrane | 37.13 | 36.9 |
Protein Annotations
| EntrezGene:102581213 | MapMan:24.2.4.1.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | UniProt:M1BTL0 | InterPro:MATE_fam | PFAM:PF01554 | EnsemblPlantsGene:PGSC0003DMG400020391 | PGSC:PGSC0003DMG400020391 |
| EnsemblPlants:PGSC0003DMT400052553 | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF259 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI000295BD2A |
| RefSeq:XP_006353110.1 | SEG:seg | : | : | : | : |
Description
Multidrug resistance pump [Source:PGSC_GENE;Acc:PGSC0003DMG400020391]
Coordinates
chr12:+:12781986..12789615
Molecular Weight (calculated)
55311.6 Da
IEP (calculated)
7.722
GRAVY (calculated)
0.636
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENKVPFLT SITPSKASFD ADEDDIKAIN GVKSFVKEFH YESKKLWYLA GPAIFTSLCQ YSLGAVTQIF AGHVGTIQLA AVSIQISVIA GFSEGILLGM
101: GSALETLCGQ AYGAKQKDML GIYMQRSWII LHATALVLMF LNIFATQILR LIGQQEKIAE WAGQFSLWMI PMVFAYAFEF PIMKFLQAQS KIMTMAVIAG
201: VSFAMHTLLT WLFMLKLGWG LAAGAVVLNC SWWFMVTAKM MYILWGNSCG EAWSGFSWEA FKNLWGFVRL SLASGVMICL ELWYFMSLIL AAGYVEDAEI
301: AVDATSICAN IIGWTFMLCI GFNAAISVRV SNELGAGHPR RAKFSVLVVS ITSLVIGALL TLVLILTRSQ YPLLFTNNVK VQKMVYDLTP VLGLTLFVNT
401: LQPTLSGVAI GAGWQEHVAY VNIICYYVIG IPLGLFLTFF IKWGMPGMWY GMLLGTTTQT TVLIWITART DWDKEASLAG ERIKQLGGSK SLNVIDGYAI
501: N
101: GSALETLCGQ AYGAKQKDML GIYMQRSWII LHATALVLMF LNIFATQILR LIGQQEKIAE WAGQFSLWMI PMVFAYAFEF PIMKFLQAQS KIMTMAVIAG
201: VSFAMHTLLT WLFMLKLGWG LAAGAVVLNC SWWFMVTAKM MYILWGNSCG EAWSGFSWEA FKNLWGFVRL SLASGVMICL ELWYFMSLIL AAGYVEDAEI
301: AVDATSICAN IIGWTFMLCI GFNAAISVRV SNELGAGHPR RAKFSVLVVS ITSLVIGALL TLVLILTRSQ YPLLFTNNVK VQKMVYDLTP VLGLTLFVNT
401: LQPTLSGVAI GAGWQEHVAY VNIICYYVIG IPLGLFLTFF IKWGMPGMWY GMLLGTTTQT TVLIWITART DWDKEASLAG ERIKQLGGSK SLNVIDGYAI
501: N
001: MAKDKDITET LLTAAEERSD LPFLSVDDIP PITTVGGFVR EFNVETKKLW YLAGPAIFTS VNQYSLGAIT QVFAGHISTI ALAAVSVENS VVAGFSFGIM
101: LGMGSALETL CGQAFGAGKL SMLGVYLQRS WVILNVTALI LSLLYIFAAP ILASIGQTAA ISSAAGIFSI YMIPQIFAYA INFPTAKFLQ SQSKIMVMAV
201: ISAVALVIHV PLTWFVIVKL QWGMPGLAVV LNASWCFIDM AQLVYIFSGT CGEAWSGFSW EAFHNLWSFV RLSLASAVML CLEVWYFMAI ILFAGYLKNA
301: EISVAALSIC MNILGWTAMI AIGMNTAVSV RVSNELGANH PRTAKFSLLV AVITSTLIGF IVSMILLIFR DQYPSLFVKD EKVIILVKEL TPILALSIVI
401: NNVQPVLSGV AVGAGWQAVV AYVNIACYYV FGIPFGLLLG YKLNYGVMGI WCGMLTGTVV QTIVLTWMIC KTNWDTEASM AEDRIREWGG EVSEIKQLIN
101: LGMGSALETL CGQAFGAGKL SMLGVYLQRS WVILNVTALI LSLLYIFAAP ILASIGQTAA ISSAAGIFSI YMIPQIFAYA INFPTAKFLQ SQSKIMVMAV
201: ISAVALVIHV PLTWFVIVKL QWGMPGLAVV LNASWCFIDM AQLVYIFSGT CGEAWSGFSW EAFHNLWSFV RLSLASAVML CLEVWYFMAI ILFAGYLKNA
301: EISVAALSIC MNILGWTAMI AIGMNTAVSV RVSNELGANH PRTAKFSLLV AVITSTLIGF IVSMILLIFR DQYPSLFVKD EKVIILVKEL TPILALSIVI
401: NNVQPVLSGV AVGAGWQAVV AYVNIACYYV FGIPFGLLLG YKLNYGVMGI WCGMLTGTVV QTIVLTWMIC KTNWDTEASM AEDRIREWGG EVSEIKQLIN
Arabidopsis Description
DTX29Protein DETOXIFICATION 29 [Source:UniProtKB/Swiss-Prot;Acc:Q38956]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.