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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:plasma membrane
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g006360.1.1 Tomato plasma membrane 94.77 90.06
VIT_12s0028g01150.t01 Wine grape plasma membrane 71.97 68.25
KRH14539 Soybean plasma membrane 70.08 66.34
VIT_12s0028g01160.t01 Wine grape peroxisome, plasma membrane, vacuole 69.46 65.61
Bra003361.1-P Field mustard plasma membrane 66.32 62.52
CDX67772 Canola plasma membrane 66.11 62.33
CDX98344 Canola plasma membrane 66.11 62.33
AT3G59030.1 Thale cress plasma membrane 65.69 61.93
GSMUA_Achr8P03000_001 Banana plasma membrane 59.2 56.83
GSMUA_Achr4P22990_001 Banana plasma membrane 59.62 56.66
Os12t0615700-01 Rice plasma membrane 55.86 53.4
TraesCS5D01G360400.1 Wheat peroxisome, plasma membrane, vacuole 55.65 52.88
TraesCS5A01G353300.1 Wheat peroxisome, plasma membrane, vacuole 55.65 52.88
TraesCS5D01G041700.1 Wheat plasma membrane 55.23 52.69
TraesCS5A01G033400.1 Wheat peroxisome, plasma membrane, vacuole 55.23 52.69
TraesCS5B01G033600.1 Wheat plasma membrane 55.02 52.49
TraesCS5B01G355700.1 Wheat peroxisome, plasma membrane, vacuole 55.23 52.49
OQU79625 Sorghum golgi, plasma membrane, vacuole 56.07 52.45
HORVU5Hr1G008770.1 Barley plasma membrane 55.23 52.28
PGSC0003DMT400032971 Potato cytosol, peroxisome, plasma membrane 46.65 44.6
PGSC0003DMT400042438 Potato cytosol, peroxisome, plasma membrane 46.03 43.22
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 43.72 43.18
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 45.19 40.91
PGSC0003DMT400022543 Potato plasma membrane 42.89 39.12
PGSC0003DMT400047906 Potato cytosol, peroxisome, plasma membrane 40.8 37.94
PGSC0003DMT400026355 Potato plasma membrane 39.12 37.1
PGSC0003DMT400021339 Potato peroxisome, plasma membrane, vacuole 36.61 36.61
PGSC0003DMT400076953 Potato plasma membrane 38.28 36.17
PGSC0003DMT400052553 Potato golgi, plasma membrane, vacuole 37.45 35.73
PGSC0003DMT400064838 Potato plasma membrane 35.56 35.71
PGSC0003DMT400005437 Potato cytosol, peroxisome, plasma membrane 37.24 35.67
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 36.61 35.5
PGSC0003DMT400060876 Potato cytosol, peroxisome, plasma membrane 35.15 34.43
PGSC0003DMT400031221 Potato cytosol, plasma membrane, vacuole 34.94 34.36
PGSC0003DMT400005432 Potato plasma membrane 33.89 34.18
PGSC0003DMT400026353 Potato plasma membrane 35.77 34.0
PGSC0003DMT400072250 Potato plasma membrane 32.01 31.55
PGSC0003DMT400011415 Potato plasma membrane 32.43 30.75
Protein Annotations
EnsemblPlants:PGSC0003DMT400074161EnsemblPlantsGene:PGSC0003DMG400028825GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF85PFAM:PF01554PGSC:PGSC0003DMG400028825
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002959A86UniProt:M1CT99MapMan:24.2.4.1.1:
Description
MATE transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400028825]
Coordinates
chr12:-:5936144..5939987
Molecular Weight (calculated)
52269.6 Da
IEP (calculated)
5.891
GRAVY (calculated)
0.753
Length
478 amino acids
Sequence
(BLAST)
001: MENQHPLLPS ILHSTAKLSD ISSDEIEEFL EYKNVSFKVY LKLFAWESRL LWLLSGAVII VLIFNYMLGF VTLMFVGHLG SLELAGASIA SVGIQGLAYG
101: VMLGMASAVE TVCGQAYGAK RYAVMGVICQ RAILLHLGAA FLLSFPYWFS GPLLKAIGQS ETISEQGELF ARGLILQLYA LAISCPMQRF LQAQNIVNPM
201: AYIAVSVFIV HVVITWLVVD VLEYGLFGAA MAQSFSWWLL VIAQGLYVVF SPWCKETWTG FSMNAFNSIW PYFKLTVASA VMLCLEIWYF QGLVLVSGLL
301: PYATVSLDSI SVCDNNSMNY WNWDMQFMLG LAAAASVRVS NELGAGHPRV AKMSVIIVNM TSIMFSTIIC IIVLIFRVGL SKLFTSDSEV IEAVSHLTPL
401: LAISVWLNGI QPILSGVAVG SGWQAVVAYV NLATYYCIGL PIGCILGFKT SLQAAVAKAA DRLKEAGNRV NEDLVDSP
Best Arabidopsis Sequence Match ( AT3G59030.1 )
(BLAST)
001: MSSTETYEPL LTRLHSDSQI TERSSPEIEE FLRRRGSTVT PRWWLKLAVW ESKLLWTLSG ASIVVSVLNY MLSFVTVMFT GHLGSLQLAG ASIATVGIQG
101: LAYGIMLGMA SAVQTVCGQA YGARQYSSMG IICQRAMVLH LAAAVFLTFL YWYSGPILKT MGQSVAIAHE GQIFARGMIP QIYAFALACP MQRFLQAQNI
201: VNPLAYMSLG VFLLHTLLTW LVTNVLDFGL LGAALILSFS WWLLVAVNGM YILMSPNCKE TWTGFSTRAF RGIWPYFKLT VASAVMLCLE IWYNQGLVII
301: SGLLSNPTIS LDAISICMYY LNWDMQFMLG LSAAISVRVS NELGAGNPRV AMLSVVVVNI TTVLISSVLC VIVLVFRVGL SKAFTSDAEV IAAVSDLFPL
401: LAVSIFLNGI QPILSGVAIG SGWQAVVAYV NLVTYYVIGL PIGCVLGFKT SLGVAGIWWG MIAGVILQTL TLIVLTLKTN WTSEVENAAQ RVKTSATENQ
501: EMANAGV
Arabidopsis Description
DTX41Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VKA2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.