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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 92.18 95.44
VIT_18s0001g06790.t01 Wine grape plasma membrane 68.74 70.0
KRH62283 Soybean cytosol, peroxisome, plasma membrane 67.33 66.8
GSMUA_Achr7P11770_001 Banana plasma membrane 57.11 66.43
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 63.33 64.1
GSMUA_Achr3P21260_001 Banana plasma membrane 57.52 62.39
GSMUA_Achr8P18130_001 Banana mitochondrion, plasma membrane, vacuole 60.72 62.09
Zm00001d027982_P002 Maize cytosol, peroxisome, plasma membrane 59.72 61.32
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 58.72 60.91
TraesCS4A01G404500.1 Wheat cytosol, peroxisome, plasma membrane 59.12 59.6
TraesCS4D01G302500.1 Wheat cytosol, peroxisome, plasma membrane 58.92 59.39
TraesCS4B01G304300.1 Wheat cytosol, peroxisome, plasma membrane 58.92 59.39
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 58.72 59.31
GSMUA_Achr7P12820_001 Banana cytosol 50.9 58.66
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 60.52 57.52
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 57.92 57.23
Zm00001d050457_P002 Maize plasma membrane 55.11 56.94
GSMUA_Achr6P04190_001 Banana plasma membrane 48.9 56.48
TraesCS7D01G129700.1 Wheat plasma membrane 53.71 55.72
TraesCS7B01G030600.1 Wheat plasma membrane 54.11 55.33
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 54.71 55.15
TraesCS5A01G247900.1 Wheat golgi, peroxisome, plasma membrane 52.51 55.04
TraesCS5D01G254500.1 Wheat mitochondrion, plasma membrane 34.07 55.02
TraesCS5B01G245500.1 Wheat plasma membrane 52.51 54.93
PGSC0003DMT400005432 Potato plasma membrane 52.1 54.85
Os08t0480000-01 Rice plasma membrane 53.71 54.81
TraesCS5D01G254400.1 Wheat plasma membrane 51.5 54.56
TraesCS5B01G245400.1 Wheat plasma membrane 51.5 54.56
TraesCS7A01G130300.1 Wheat plasma membrane 53.11 54.53
Os09t0468000-01 Rice plasma membrane 52.51 54.36
KXG35815 Sorghum plasma membrane 51.9 53.73
EER96891 Sorghum cytosol, peroxisome, plasma membrane 51.7 53.09
EER96893 Sorghum cytosol, peroxisome, vacuole 50.3 52.62
HORVU5Hr1G069900.5 Barley golgi 52.3 50.98
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 52.91 50.48
PGSC0003DMT400031221 Potato cytosol, plasma membrane, vacuole 47.29 48.56
PGSC0003DMT400060876 Potato cytosol, peroxisome, plasma membrane 46.89 47.95
PGSC0003DMT400072250 Potato plasma membrane 44.69 45.98
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 44.49 45.87
PGSC0003DMT400076953 Potato plasma membrane 45.89 45.26
PGSC0003DMT400021339 Potato peroxisome, plasma membrane, vacuole 42.89 44.77
PGSC0003DMT400026355 Potato plasma membrane 45.09 44.64
PGSC0003DMT400052553 Potato golgi, plasma membrane, vacuole 43.49 43.31
PGSC0003DMT400047906 Potato cytosol, peroxisome, plasma membrane 44.49 43.19
PGSC0003DMT400064838 Potato plasma membrane 41.08 43.07
PGSC0003DMT400032971 Potato cytosol, peroxisome, plasma membrane 42.48 42.4
PGSC0003DMT400026353 Potato plasma membrane 42.48 42.15
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 43.69 41.29
PGSC0003DMT400042438 Potato cytosol, peroxisome, plasma membrane 42.08 41.26
PGSC0003DMT400011415 Potato plasma membrane 41.48 41.07
PGSC0003DMT400022543 Potato plasma membrane 43.09 41.03
PGSC0003DMT400074161 Potato plasma membrane 35.67 37.24
Protein Annotations
EntrezGene:102594262MapMan:24.2.4.1.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085UniProt:M0ZPW3InterPro:MATE_famPFAM:PF01554EnsemblPlantsGene:PGSC0003DMG400002123PGSC:PGSC0003DMG400002123
EnsemblPlants:PGSC0003DMT400005437PANTHER:PTHR11206PANTHER:PTHR11206:SF194TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002957FD6
RefSeq:XP_006338107.1:::::
Description
Ripening regulated protein DDTFR18 [Source:PGSC_GENE;Acc:PGSC0003DMG400002123]
Coordinates
chr4:-:64433433..64440910
Molecular Weight (calculated)
55113.2 Da
IEP (calculated)
6.702
GRAVY (calculated)
0.603
Length
499 amino acids
Sequence
(BLAST)
001: MGSVIDENRQ SLLLAEETSA NRLPENKIER TEDEDDKDLQ TRVWIETKKL WHIVGPAIFS RIATYTMNII TQSFAGHLGE VELAAISISN TVIVGLNFGL
101: LLGMASALET LCGQAYGAKK HHMLGIYMQR SWIVLTLCCF LLLPMYTFAT PILKALGQPD DVAELSGIVA LWFIPLHFSF AFQFPIQRFL QSQLKTVVIA
201: WISLAVLAIH TVISWLFVYK LNLGIVGAAV ALDISWWLLV IGMFIYAACG GCPETWSGFS TQAFSGLWEF FQLSAAAGVM LCLENWYYRI LMLMTGYLEN
301: ATLALDALSI CMNINGWEMM IPLAFFAATG VRVANELGAG RGKAAKFATA VSVIQSTIIG LIFCVLIMIY QDKFALIFSS SFDVLKAFKK ISYLLAFTIL
401: LNSVQPVLSG VAVGSGWQSK VAYINLGCYY LVGVPLGILM GMVLHTGLEG MWAGMIFGGT ALQTIVLAFI TYRSDWEKEA RKARMHVEKW SEPPPVSQS
Best Arabidopsis Sequence Match ( AT5G65380.1 )
(BLAST)
001: MRGGDGEEGS ESRVALLKSP HTAEEDGEGL KDRILVETKK LWQIVGPAIF SRVTTYSMLV ITQAFAGHLG DLELAAISIV NNVTVGFNFG LLLGMASALE
101: TLCGQAFGAK KYHMLGVYMQ RSWIVLFFCC VLLLPTYIFT TPVLKFLGQP DDIAELSGVV AIWVIPLHFA FTLSFPLQRF LQCQLKNRVT AYAAAVALVV
201: HILVCWLFVD GLKLGVVGTV ATISISWWVN VLILLVYSTC GGCPLTWTGL SSEALTGLWE FLKLSASSGV MLCLENWYYR ILIIMTGNLQ NARIAVDSLS
301: ICMAINGWEM MIPLAFFAGT GVRVANELGA GNGKGARFAT IVSVTQSLII GLFFWVLIML LHNQIAWIFS SSVAVLDAVN KLSLLLAFTV LLNSVQPVLS
401: GVAVGSGWQS YVAYINLGCY YCIGVPLGFL MGWGFKLGVM GIWGGMIFGG TAVQTMILSF ITMRCDWEKE AQKASARINK WSNTIK
Arabidopsis Description
DTX27Protein DETOXIFICATION 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.