Skip to main content
crop-pal logo
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:peroxisome, secretory
MultiLoc:golgi
TargetP:secretory
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G245500.1 Wheat plasma membrane 88.67 95.18
TraesCS5D01G254500.1 Wheat mitochondrion, plasma membrane 57.42 95.15
TraesCS5A01G247900.1 Wheat golgi, peroxisome, plasma membrane 86.91 93.49
EER96893 Sorghum cytosol, peroxisome, vacuole 65.43 70.23
KXG35815 Sorghum plasma membrane 65.43 69.5
EER96891 Sorghum cytosol, peroxisome, plasma membrane 65.43 68.93
Os09t0468000-01 Rice plasma membrane 64.65 68.67
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 22.27 61.96
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 56.84 58.91
Bra037814.1-P Field mustard plasma membrane 54.88 58.18
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 54.49 58.0
Bra024381.1-P Field mustard plasma membrane 54.69 57.85
CDX81281 Canola plasma membrane 54.49 57.64
AT5G65380.1 Thale cress cytosol, peroxisome, plasma membrane 54.1 57.0
CDX78379 Canola peroxisome, plasma membrane, vacuole 51.17 56.71
CDY33962 Canola plasma membrane 34.96 55.94
Bra006059.1-P Field mustard plasma membrane 53.12 55.85
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 57.03 55.83
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 51.37 55.6
VIT_18s0001g06790.t01 Wine grape plasma membrane 53.12 55.51
KRH74515 Soybean cytosol, peroxisome, plasma membrane 53.12 55.4
CDX81176 Canola plasma membrane 52.34 54.92
CDX69834 Canola plasma membrane 50.98 54.83
CDX85764 Canola plasma membrane 53.12 54.4
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 52.34 54.36
VIT_18s0001g06820.t01 Wine grape plasma membrane 51.37 54.34
CDX69835 Canola plasma membrane 51.56 54.21
CDY40093 Canola plasma membrane 53.12 54.18
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 52.15 54.16
CDX78378 Canola plasma membrane 51.17 54.02
CDX97005 Canola plasma membrane 51.37 54.0
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 50.59 53.73
CDX81172 Canola plasma membrane 50.78 53.61
CDY14558 Canola plasma membrane 33.59 53.42
AT5G10420.1 Thale cress plasma membrane 50.78 53.17
Bra009034.1-P Field mustard plasma membrane 44.53 53.15
CDY08798 Canola cytosol, peroxisome, plasma membrane 33.2 52.96
CDY40095 Canola plasma membrane 50.2 52.77
CDX97001 Canola plasma membrane 50.39 52.55
PGSC0003DMT400005437 Potato cytosol, peroxisome, plasma membrane 50.98 52.3
CDY70471 Canola cytosol, peroxisome, plasma membrane 30.86 52.15
KRH62283 Soybean cytosol, peroxisome, plasma membrane 50.98 51.89
CDY08796 Canola plasma membrane 54.69 51.66
CDY61495 Canola plasma membrane 54.69 51.38
AT5G44050.1 Thale cress plasma membrane 49.22 51.32
PGSC0003DMT400005432 Potato plasma membrane 47.07 50.84
CDX81174 Canola plasma membrane 40.04 50.49
CDY54720 Canola plasma membrane 55.27 50.36
Solyc04g074840.2.1 Tomato plasma membrane 49.02 49.9
Bra006058.1-P Field mustard plasma membrane 50.59 49.24
Bra024379.1-P Field mustard plasma membrane 52.54 47.36
KRH62279 Soybean cytosol, peroxisome, plasma membrane 48.24 47.14
CDY08797 Canola plasma membrane 51.95 47.08
Bra028589.1-P Field mustard peroxisome 38.09 46.99
HORVU5Hr1G045360.3 Barley cytosol, peroxisome, plasma membrane 43.75 44.18
HORVU5Hr1G086830.4 Barley cytosol, peroxisome, plasma membrane 42.58 43.17
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 41.6 41.85
HORVU2Hr1G046420.16 Barley plasma membrane 40.04 41.5
HORVU6Hr1G091840.1 Barley plasma membrane 40.43 41.24
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 41.21 40.89
Solyc04g074860.2.1 Tomato plasma membrane 45.31 40.77
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 40.43 40.27
HORVU3Hr1G014320.2 Barley plasma membrane 38.28 40.16
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 39.65 39.96
HORVU3Hr1G074290.9 Barley nucleus, peroxisome, plasma membrane 38.67 39.68
HORVU0Hr1G022320.1 Barley plasma membrane 37.11 39.26
HORVU4Hr1G011690.1 Barley plasma membrane 38.67 38.0
HORVU7Hr1G049240.3 Barley peroxisome 39.84 36.89
HORVU5Hr1G008770.1 Barley plasma membrane 36.13 36.63
HORVU2Hr1G117540.1 Barley plasma membrane 31.84 34.1
HORVU0Hr1G010460.2 Barley cytosol 6.64 32.08
CDX69836 Canola plasma membrane 50.78 25.34
Protein Annotations
EnsemblPlants:HORVU5Hr1G069900.5EnsemblPlantsGene:HORVU5Hr1G069900GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF150PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B46A08AUniProt:A0A287RP85MapMan:24.2.4.1.1:
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A287RP85]
Coordinates
chrchr5H:-:526120800..526123232
Molecular Weight (calculated)
54832.7 Da
IEP (calculated)
7.495
GRAVY (calculated)
0.707
Length
512 amino acids
Sequence
(BLAST)
001: RFQAGSSLAY TAILVSLDEE HIFSLQSAVC RSSHTMERQK APLLVKRAKE REGQVHRLAG EVWEESMKLW EVVGPAVFMR LVLYSLNIIS LSFAGHLGDA
101: ELAAFSIAST VISGFNLGFL LGMASALETL CGQAYGAKQY AMLGVYMQRS WLVLLAFAAL LSPTYIFSGQ LLSALGQPAD LAREAGAVSA CLLPLHFMYA
201: ILLPLNKFLQ CQRKNAVTAV TTAVALPVHA AVTWLLVSYL GLGVIGAAVA LNFSWALVVA LQLAYAVGGG CPETWGGFSS LAFVDMWGFV KLSSASGVML
301: CLESWYYRVL IFVTGYMKNV ELAVDALSIC LSLTGLEMMI PLGFLAGTGV RVANELGAGN GHRARFATMV STTTSFVISI FFCLLALGLH GRLALIFSSS
401: KAVIDAVDDM SVLLALTVLL NGVQPVLSGV AVGSGWQAQV AYVNIGSYYL IGVPFGVLLG WTFHLGVHGI WAGMIGGTTV QTLILAYMTI RCDWDQEALK
501: ASNRMRLMGS SE
Best Arabidopsis Sequence Match ( AT1G33100.1 )
(BLAST)
001: MAGRGGELTE ALVKKTGREE EDELGMKEKV WIESKKLWVV AAPAIFTRYS TFGVSMVTQA FIGHLGPTEL AAYSITFTIL LRFSNGILLG MAGALGTLCG
101: QAYGAKQYQM LGIYLQRSWI VLTGGTICLM PVFIFAGPIL LALGQEERIV RVARVLALWV IGINFSFVPS FTCQMFLQAQ SKNKIISYVT AVSLGLHVFF
201: SWLLVAHFNF GITGAMTSML IAFWLPIIVQ LLYVTCGGCK DTWRGFSMLA FKDLWPVLKL SLSSGGMLCL ELWYNSVLVL LTGNLKNAEV ALDALAICIS
301: INALEMMIAL GFLAAVSVRV SNELGSGNPK GAKFATLIAV FTSLSIGIVL FFVFLFLRGR ISYIFTTSEA VAAEVADLSP LLAFSILLNS VQPVLSGVAI
401: GAGWQGYVAY VNLACYYLVG IPIGVILGYV VGLQVKGVWI GMLFGIFVQT CVLTVMTLRT DWDQQVSTSL RNINRWVVPE SRDANQISSE E
Arabidopsis Description
DTX20Protein DETOXIFICATION 20 [Source:UniProtKB/Swiss-Prot;Acc:F4HPH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.