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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX81176 Canola plasma membrane 91.87 76.43
CDX78379 Canola peroxisome, plasma membrane, vacuole 83.25 73.16
CDX69835 Canola plasma membrane 83.0 69.2
CDY40095 Canola plasma membrane 82.27 68.58
CDX97005 Canola plasma membrane 82.02 68.38
CDX78378 Canola plasma membrane 76.85 64.33
CDX81172 Canola plasma membrane 76.85 64.33
CDY40093 Canola plasma membrane 76.6 61.95
CDX97001 Canola plasma membrane 74.88 61.91
CDX69834 Canola plasma membrane 71.92 61.34
CDX85764 Canola plasma membrane 75.12 61.0
CDY33962 Canola plasma membrane 47.04 59.69
CDY70471 Canola cytosol, peroxisome, plasma membrane 43.84 58.75
CDY08798 Canola cytosol, peroxisome, plasma membrane 45.57 57.63
CDY14558 Canola plasma membrane 45.57 57.45
CDX81281 Canola plasma membrane 66.5 55.79
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 24.63 54.35
CDY08796 Canola plasma membrane 69.46 52.03
GSMUA_Achr7P11770_001 Banana plasma membrane 54.68 51.75
CDY61495 Canola plasma membrane 69.46 51.74
GSMUA_Achr3P21260_001 Banana plasma membrane 57.64 50.87
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 61.33 50.51
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 60.59 49.9
KRH74515 Soybean cytosol, peroxisome, plasma membrane 60.34 49.9
GSMUA_Achr8P18130_001 Banana mitochondrion, plasma membrane, vacuole 59.85 49.8
TraesCS5D01G254500.1 Wheat mitochondrion, plasma membrane 37.19 48.87
CDY08797 Canola plasma membrane 67.73 48.67
CDY54720 Canola plasma membrane 67.0 48.4
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 55.66 46.99
Zm00001d027982_P002 Maize cytosol, peroxisome, plasma membrane 55.42 46.3
GSMUA_Achr7P12820_001 Banana cytosol 49.26 46.19
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 55.42 45.55
TraesCS4A01G404500.1 Wheat cytosol, peroxisome, plasma membrane 55.42 45.45
GSMUA_Achr6P04190_001 Banana plasma membrane 48.28 45.37
TraesCS4B01G304300.1 Wheat cytosol, peroxisome, plasma membrane 54.93 45.05
TraesCS4D01G302500.1 Wheat cytosol, peroxisome, plasma membrane 54.93 45.05
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 55.17 44.36
TraesCS5B01G245500.1 Wheat plasma membrane 51.23 43.61
TraesCS5B01G245400.1 Wheat plasma membrane 50.49 43.52
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 56.16 43.43
TraesCS5D01G254400.1 Wheat plasma membrane 50.25 43.31
TraesCS5A01G247900.1 Wheat golgi, peroxisome, plasma membrane 50.49 43.07
Os09t0468000-01 Rice plasma membrane 50.74 42.74
Os08t0480000-01 Rice plasma membrane 50.74 42.13
TraesCS7D01G129700.1 Wheat plasma membrane 49.75 42.0
TraesCS7A01G130300.1 Wheat plasma membrane 50.25 41.98
KXG35815 Sorghum plasma membrane 49.26 41.49
Zm00001d050457_P002 Maize plasma membrane 49.26 41.41
TraesCS7B01G030600.1 Wheat plasma membrane 49.75 41.39
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 49.75 40.81
EER96891 Sorghum cytosol, peroxisome, plasma membrane 48.03 40.12
HORVU5Hr1G069900.5 Barley golgi 50.49 40.04
EER96893 Sorghum cytosol, peroxisome, vacuole 46.8 39.83
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 50.25 39.01
CDY44967 Canola plasma membrane 37.93 38.31
CDY07257 Canola endoplasmic reticulum, vacuole 30.79 38.23
CDX93794 Canola plasma membrane 45.81 37.73
CDY01224 Canola plasma membrane 30.79 37.09
CDY06731 Canola cytosol, peroxisome, plasma membrane 42.12 35.33
CDY17070 Canola cytosol, peroxisome, plasma membrane 42.12 35.33
CDY33131 Canola golgi, plasma membrane, vacuole 15.27 35.23
CDY33129 Canola cytosol, peroxisome, plasma membrane 41.63 33.47
CDX92916 Canola cytosol, plasma membrane, vacuole 41.38 33.27
CDY38631 Canola cytosol, peroxisome, vacuole 41.38 32.81
CDY19294 Canola cytosol, peroxisome, plasma membrane 41.38 32.68
CDY39494 Canola cytosol, peroxisome, plasma membrane 41.13 32.49
CDY64933 Canola plasma membrane 40.39 32.48
CDX79109 Canola plasma membrane 39.66 32.39
CDX94061 Canola peroxisome, plasma membrane, vacuole 40.39 32.35
CDY65669 Canola cytosol, peroxisome, plasma membrane 39.41 32.32
CDX94432 Canola plasma membrane 40.64 32.29
CDY39493 Canola cytosol, peroxisome, plasma membrane 39.9 32.21
CDY24250 Canola cytosol, peroxisome, plasma membrane 25.12 32.18
CDY12916 Canola cytosol, plasma membrane, vacuole 39.66 32.14
CDY19507 Canola cytosol, plasma membrane, vacuole 39.66 32.14
CDX76391 Canola plasma membrane 39.66 32.07
CDX89406 Canola plasma membrane 40.39 32.03
CDX98711 Canola peroxisome, plasma membrane, vacuole 39.9 31.95
CDY27434 Canola plasma membrane 39.41 31.87
CDY69153 Canola cytosol, peroxisome, plasma membrane 24.88 31.86
CDY34637 Canola plasma membrane 35.96 31.81
CDY25329 Canola plasma membrane 39.16 31.74
CDY47166 Canola plasma membrane 39.16 31.74
CDY50654 Canola plasma membrane 38.92 31.66
CDY51758 Canola plasma membrane 38.92 31.66
CDY21177 Canola plasma membrane 38.67 31.53
CDY29945 Canola plasma membrane 38.67 31.53
CDY34833 Canola plasma membrane 35.47 31.37
CDY13643 Canola cytosol, peroxisome, plasma membrane 38.42 31.01
CDX94063 Canola plasma membrane 38.67 30.97
CDY27431 Canola plasma membrane 38.67 30.97
CDX94064 Canola plasma membrane 31.53 30.92
CDY33130 Canola cytosol, peroxisome, vacuole 23.4 30.84
CDY21076 Canola cytosol, peroxisome, plasma membrane 39.41 30.83
CDX83627 Canola cytosol, peroxisome, plasma membrane 38.18 30.82
CDX98712 Canola plasma membrane 38.42 30.77
CDY34598 Canola cytosol, peroxisome, vacuole 39.16 30.64
CDY26602 Canola cytosol, peroxisome, vacuole 38.67 30.25
CDY16041 Canola cytosol, peroxisome, vacuole 38.42 30.06
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 39.9 29.83
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 39.9 29.83
CDX69836 Canola plasma membrane 75.12 29.73
CDY38453 Canola plasma membrane 29.06 29.65
CDX83628 Canola plasma membrane 28.57 29.52
CDX76392 Canola plasma membrane 33.0 29.07
CDX98713 Canola plasma membrane 32.51 29.01
CDX67772 Canola plasma membrane 36.21 28.99
CDX98344 Canola plasma membrane 36.21 28.99
CDY19295 Canola cytosol, peroxisome, plasma membrane 21.67 28.95
CDY49481 Canola plasma membrane 30.54 28.38
CDY64820 Canola plasma membrane 36.45 28.35
CDY16896 Canola plasma membrane 34.24 28.02
CDY50190 Canola nucleus, peroxisome, plasma membrane 40.39 27.2
CDX92726 Canola nucleus, peroxisome, plasma membrane 39.66 26.92
CDX84047 Canola plasma membrane 44.09 25.43
Protein Annotations
EnsemblPlants:CDX81174EnsemblPlantsGene:GSBRNA2T00134632001GO:A0A078CYW5GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF80PFAM:PF01554ProteinID:CDX81174
ProteinID:CDX81174.1SEG:segTMHMM:TMhelixUniParc:UPI0004EF0E3EMapMan:24.2.4.1.1:
Description
BnaC03g04280D
Coordinates
chrLK031823:-:2047739..2051725
Molecular Weight (calculated)
45223.2 Da
IEP (calculated)
7.312
GRAVY (calculated)
0.704
Length
406 amino acids
Sequence
(BLAST)
001: MGGRDEEAEG VGEATIPLLR DQHDEAEEDG DIVVETKKLW RIVGPAIFTR ITTYLILIIT QAFAGHLGEL ELAAISIRSW IVLFLCSILL LPMYFFATPI
101: LKYFGQPDDI AELSGTVALW VIPIHFAFAF FFPLNRFLQC QLKNMVIAIL AGVALVVHIF LCWLFVYGLK LGVIGTMATV NVSWCLNVFV LFTYATCGGC
201: PLITWTGFSI EAFTGLWKFA KLSASSGIML CLENWYYKIL ILMTGNLKDA KIAVDSICMS RNGLEMMIPL AFLAGTGETV IKAVTDLSFL LAFTILLNSV
301: QPVLSGVAIG SGWQSFLAYI NLGCYYFISL PLGFVMGWIF KFGVKSIWAG MIFGGTAIQT LILTFIVTRC DWDKEAQKAS VRVNKWSISN SEARHRRLYN
401: LYTFVK
Best Arabidopsis Sequence Match ( AT1G33100.1 )
(BLAST)
001: MAGRGGELTE ALVKKTGREE EDELGMKEKV WIESKKLWVV AAPAIFTRYS TFGVSMVTQA FIGHLGPTEL AAYSITFTIL LRFSNGILLG MAGALGTLCG
101: QAYGAKQYQM LGIYLQRSWI VLTGGTICLM PVFIFAGPIL LALGQEERIV RVARVLALWV IGINFSFVPS FTCQMFLQAQ SKNKIISYVT AVSLGLHVFF
201: SWLLVAHFNF GITGAMTSML IAFWLPIIVQ LLYVTCGGCK DTWRGFSMLA FKDLWPVLKL SLSSGGMLCL ELWYNSVLVL LTGNLKNAEV ALDALAICIS
301: INALEMMIAL GFLAAVSVRV SNELGSGNPK GAKFATLIAV FTSLSIGIVL FFVFLFLRGR ISYIFTTSEA VAAEVADLSP LLAFSILLNS VQPVLSGVAI
401: GAGWQGYVAY VNLACYYLVG IPIGVILGYV VGLQVKGVWI GMLFGIFVQT CVLTVMTLRT DWDQQVSTSL RNINRWVVPE SRDANQISSE E
Arabidopsis Description
DTX20Protein DETOXIFICATION 20 [Source:UniProtKB/Swiss-Prot;Acc:F4HPH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.