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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050457_P002 Maize plasma membrane 91.31 93.58
Os08t0480000-01 Rice plasma membrane 80.2 81.19
TraesCS7D01G129700.1 Wheat plasma membrane 76.77 79.0
TraesCS7A01G130300.1 Wheat plasma membrane 77.17 78.6
TraesCS7B01G030600.1 Wheat plasma membrane 77.17 78.28
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 77.58 73.42
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 23.84 64.13
KXG35815 Sorghum plasma membrane 59.39 61.0
Bra024381.1-P Field mustard plasma membrane 58.18 59.5
KRH74515 Soybean cytosol, peroxisome, plasma membrane 58.99 59.47
EER96893 Sorghum cytosol, peroxisome, vacuole 56.97 59.12
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 60.2 59.01
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 56.36 58.99
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 57.17 58.84
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 61.82 58.29
AT5G65380.1 Thale cress cytosol, peroxisome, plasma membrane 57.17 58.23
VIT_18s0001g06790.t01 Wine grape plasma membrane 57.58 58.16
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 56.57 56.8
Bra037814.1-P Field mustard plasma membrane 55.15 56.52
CDX78379 Canola peroxisome, plasma membrane, vacuole 52.73 56.49
CDX81281 Canola plasma membrane 55.15 56.41
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 54.75 56.22
EER96891 Sorghum cytosol, peroxisome, plasma membrane 54.75 55.76
Bra006059.1-P Field mustard plasma membrane 54.75 55.65
CDY33962 Canola plasma membrane 35.96 55.62
CDX69834 Canola plasma membrane 53.13 55.25
CDX97005 Canola plasma membrane 54.34 55.24
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 54.95 55.17
AT5G10420.1 Thale cress plasma membrane 54.34 55.01
CDX81176 Canola plasma membrane 54.14 54.92
CDX69835 Canola plasma membrane 53.94 54.83
PGSC0003DMT400005437 Potato cytosol, peroxisome, plasma membrane 55.15 54.71
VIT_18s0001g06820.t01 Wine grape plasma membrane 53.13 54.34
CDY40095 Canola plasma membrane 53.33 54.21
CDX85764 Canola plasma membrane 54.75 54.2
KRH62283 Soybean cytosol, peroxisome, plasma membrane 54.95 54.08
CDY40093 Canola plasma membrane 54.75 53.98
CDY70471 Canola cytosol, peroxisome, plasma membrane 32.93 53.8
CDY08798 Canola cytosol, peroxisome, plasma membrane 34.75 53.58
AT5G44050.1 Thale cress plasma membrane 52.93 53.36
CDY08796 Canola plasma membrane 58.18 53.14
CDX81172 Canola plasma membrane 51.92 52.99
CDY61495 Canola plasma membrane 58.18 52.84
CDY14558 Canola plasma membrane 34.34 52.8
CDX97001 Canola plasma membrane 52.32 52.75
Bra009034.1-P Field mustard plasma membrane 45.66 52.68
CDX78378 Canola plasma membrane 51.52 52.58
Solyc04g074840.2.1 Tomato plasma membrane 52.53 51.69
PGSC0003DMT400005432 Potato plasma membrane 49.49 51.69
CDY08797 Canola plasma membrane 57.17 50.09
CDX81174 Canola plasma membrane 40.81 49.75
CDY54720 Canola plasma membrane 55.35 48.75
KRH62279 Soybean cytosol, peroxisome, plasma membrane 51.52 48.66
EES15585 Sorghum cytosol, peroxisome, plasma membrane 51.52 48.57
Bra024379.1-P Field mustard plasma membrane 55.35 48.24
Bra006058.1-P Field mustard plasma membrane 50.91 47.91
Bra028589.1-P Field mustard peroxisome 39.39 46.99
EES09180 Sorghum cytosol, peroxisome, plasma membrane 49.49 46.31
OQU87609 Sorghum plasma membrane 37.17 44.99
OQU85979 Sorghum cytosol, peroxisome, vacuole 45.86 44.77
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 45.86 44.34
EES15223 Sorghum plasma membrane 45.45 44.29
OQU85978 Sorghum plasma membrane 36.36 43.37
OQU80697 Sorghum cytosol 46.46 43.23
EER91319 Sorghum cytosol, peroxisome, plasma membrane 43.43 42.74
Solyc04g074860.2.1 Tomato plasma membrane 48.28 42.0
EER91211 Sorghum plasma membrane 41.82 41.99
KXG37120 Sorghum plasma membrane 42.63 41.78
KXG38133 Sorghum cytosol, peroxisome, vacuole 43.43 41.67
EER91321 Sorghum plasma membrane 41.41 40.92
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 39.6 39.52
EER93896 Sorghum cytosol, peroxisome, plasma membrane 40.61 38.36
KXG38740 Sorghum plasma membrane 38.38 37.33
OQU79625 Sorghum golgi, plasma membrane, vacuole 37.98 36.79
OQU92001 Sorghum peroxisome 38.79 36.36
CDX69836 Canola plasma membrane 52.53 25.34
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1B6PI33GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlants:KXG25339ProteinID:KXG25339ProteinID:KXG25339.1InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF177EnsemblPlantsGene:SORBI_3007G160700TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI00022071AA
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:+:59554478..59559414
Molecular Weight (calculated)
53529.1 Da
IEP (calculated)
5.348
GRAVY (calculated)
0.761
Length
495 amino acids
Sequence
(BLAST)
001: MEEEDQARAA PLLQQPLPLG DFVDDEVGGG AATTKAAGRA AVEWWVESKK LWHIVGPAIF QRIALYGVNV VSQAFIGHLG DLELAAFSIA ATVVAGFNFG
101: FLLGMASALE TLCGQAFGAK KHHMLGVYLQ RSWIVLLIFA AALTPTYIFM EDLLLLIGQT PELSRLAGQM SVWLLPQHFA MAMLLPLTRF LQSQLKNWVT
201: AITAAVALAI HVVVTYVLVQ VLGYGIVGAV ASADMAWWLV VLGQYVYVVG GGCPLSWKGF TMEAFADFWE FIKLSSASGV MLCLENWYYR LLVLLTGYLK
301: NAEIAVDALS ICQTINGWEM MIPFGFLAAT GVRVANELGA GSGKGARFAI VVSITTSVVI GLVFWCLILY FDDKIALLFT SSAVVLDAVH HLSVLLAFTI
401: LLNSVQPVLS GVAVGSGWQA LVAYVNVGTY YLIGVPLGII LGWPLQFGVG GIWSGMIGGT AVQTIILAYL TVKCDWDEEA RLASMRMQKW ADDLK
Best Arabidopsis Sequence Match ( AT5G65380.1 )
(BLAST)
001: MRGGDGEEGS ESRVALLKSP HTAEEDGEGL KDRILVETKK LWQIVGPAIF SRVTTYSMLV ITQAFAGHLG DLELAAISIV NNVTVGFNFG LLLGMASALE
101: TLCGQAFGAK KYHMLGVYMQ RSWIVLFFCC VLLLPTYIFT TPVLKFLGQP DDIAELSGVV AIWVIPLHFA FTLSFPLQRF LQCQLKNRVT AYAAAVALVV
201: HILVCWLFVD GLKLGVVGTV ATISISWWVN VLILLVYSTC GGCPLTWTGL SSEALTGLWE FLKLSASSGV MLCLENWYYR ILIIMTGNLQ NARIAVDSLS
301: ICMAINGWEM MIPLAFFAGT GVRVANELGA GNGKGARFAT IVSVTQSLII GLFFWVLIML LHNQIAWIFS SSVAVLDAVN KLSLLLAFTV LLNSVQPVLS
401: GVAVGSGWQS YVAYINLGCY YCIGVPLGFL MGWGFKLGVM GIWGGMIFGG TAVQTMILSF ITMRCDWEKE AQKASARINK WSNTIK
Arabidopsis Description
DTX27Protein DETOXIFICATION 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.