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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • cytosol 2
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G137200.1 Wheat plasma membrane 68.8 76.41
TraesCS7D01G240600.1 Wheat plasma membrane 68.8 76.41
TraesCS7A01G131500.2 Wheat plasma membrane 67.67 75.63
TraesCS7A01G241600.1 Wheat plasma membrane 68.05 75.57
TraesCS7D01G469000.1 Wheat plasma membrane 67.67 75.47
TraesCS7D01G130700.1 Wheat plasma membrane 67.48 75.42
TraesCS7A01G482100.1 Wheat plasma membrane 67.86 75.37
TraesCS7B01G384300.1 Wheat plasma membrane 66.92 74.63
TraesCS7B01G032100.1 Wheat plasma membrane 67.11 74.53
TraesCS7A01G131600.1 Wheat plasma membrane 65.98 73.74
TraesCS7D01G130800.1 Wheat plasma membrane 65.98 73.74
Zm00001d049910_P001 Maize cytosol, peroxisome, plasma membrane 82.14 73.45
TraesCS7B01G032300.1 Wheat plasma membrane 65.6 73.32
TraesCS2B01G612900.1 Wheat plasma membrane 65.23 72.29
Os08t0562800-01 Rice peroxisome, plasma membrane, vacuole 59.77 70.51
HORVU0Hr1G022320.1 Barley plasma membrane 61.28 67.36
GSMUA_Achr1P15340_001 Banana plasma membrane 57.52 64.42
GSMUA_Achr7P04510_001 Banana plasma membrane 46.99 62.81
HORVU7Hr1G049240.3 Barley peroxisome 64.85 62.39
GSMUA_AchrUn_... Banana golgi, peroxisome, vacuole 56.77 59.68
Bra013906.1-P Field mustard plasma membrane 53.2 57.87
VIT_15s0046g01800.t01 Wine grape plasma membrane 52.07 57.35
OQU85979 Sorghum cytosol, peroxisome, vacuole 54.51 57.2
Bra019147.1-P Field mustard plasma membrane 52.26 56.97
VIT_16s0050g00910.t01 Wine grape plasma membrane 51.32 55.83
VIT_16s0050g00930.t01 Wine grape plasma membrane 51.69 55.78
Solyc03g025240.1.1 Tomato plasma membrane 41.73 55.64
AT4G25640.2 Thale cress plasma membrane 53.57 55.45
CDX89406 Canola plasma membrane 53.2 55.27
OQU85978 Sorghum plasma membrane 43.05 55.18
Solyc03g025200.2.1 Tomato plasma membrane 49.25 55.16
CDX94432 Canola plasma membrane 52.82 54.99
KRH40412 Soybean plasma membrane 52.44 54.71
KRH00809 Soybean plasma membrane 51.69 54.46
Solyc03g025230.2.1 Tomato plasma membrane 50.38 53.6
KRG91572 Soybean vacuole 49.62 53.44
KRH35253 Soybean plasma membrane 49.44 53.24
Solyc03g025190.2.1 Tomato plasma membrane 50.56 53.16
PGSC0003DMT400026355 Potato plasma membrane 50.19 52.98
VIT_16s0050g00900.t01 Wine grape plasma membrane 48.68 52.97
PGSC0003DMT400076953 Potato plasma membrane 49.81 52.37
AT4G00350.1 Thale cress cytosol, peroxisome, plasma membrane 53.2 52.21
PGSC0003DMT400026353 Potato plasma membrane 49.25 52.09
Solyc06g036130.2.1 Tomato plasma membrane 49.25 51.98
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 53.01 51.93
Solyc03g025250.2.1 Tomato plasma membrane 48.87 51.9
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 49.81 51.66
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 52.63 51.57
CDY49481 Canola plasma membrane 40.98 49.89
Bra010453.1-P Field mustard plasma membrane 45.11 49.18
CDY50190 Canola nucleus, peroxisome, plasma membrane 53.57 47.26
CDX92726 Canola nucleus, peroxisome, plasma membrane 53.01 47.16
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 43.23 46.46
OQU87609 Sorghum plasma membrane 35.34 45.97
Solyc03g025220.2.1 Tomato plasma membrane 43.61 45.94
EES15223 Sorghum plasma membrane 43.42 45.47
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 43.61 45.31
KRH38402 Soybean plasma membrane 40.41 44.06
KRH08881 Soybean plasma membrane 39.47 44.03
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 40.98 43.95
EER91319 Sorghum cytosol, peroxisome, plasma membrane 41.54 43.94
EER91321 Sorghum plasma membrane 41.17 43.71
KRH08883 Soybean plasma membrane 39.66 43.24
EER96893 Sorghum cytosol, peroxisome, vacuole 38.53 42.98
KXG35815 Sorghum plasma membrane 38.91 42.95
KRH38403 Soybean plasma membrane 39.29 42.83
KXG37120 Sorghum plasma membrane 40.6 42.77
KXG38133 Sorghum cytosol, peroxisome, vacuole 41.17 42.44
EER96891 Sorghum cytosol, peroxisome, plasma membrane 38.72 42.39
EER91211 Sorghum plasma membrane 38.72 41.78
EER93896 Sorghum cytosol, peroxisome, plasma membrane 40.41 41.03
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 38.16 40.2
EES15585 Sorghum cytosol, peroxisome, plasma membrane 39.29 39.81
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 39.29 39.81
EES09180 Sorghum cytosol, peroxisome, plasma membrane 38.72 38.94
OQU79625 Sorghum golgi, plasma membrane, vacuole 36.28 37.77
OQU92001 Sorghum peroxisome 37.22 37.5
KXG38740 Sorghum plasma membrane 35.15 36.74
KRH38401 Soybean plasma membrane 32.52 33.14
Protein Annotations
MapMan:24.2.4.1.1EntrezGene:8054843UniProt:A0A1Z5RAF7GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0016021GO:GO:0055085InterPro:MATE_famEnsemblPlants:OQU80697ProteinID:OQU80697ProteinID:OQU80697.1
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF131EnsemblPlantsGene:SORBI_3007G165500TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0001A87B5CRefSeq:XP_002444569.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr7:+:60022285..60028316
Molecular Weight (calculated)
56688.8 Da
IEP (calculated)
6.864
GRAVY (calculated)
0.623
Length
532 amino acids
Sequence
(BLAST)
001: MQGRRDGQRA DADTDTPRTP CCIASASTGG AGRTAAMGGD ASTIEGAPLL GGRQASHEHD TPPVRTAGDA ARMVWDESKR LWGIGLPIAV GMLSMYAISS
101: ITQMFIGHLG NLPLAAASIG LSVFSTFALG FLLGMGSALE TLCGQAFGAG QVAMLGVYLQ RSWLILVAAC VIMTPLFVFA EPLLLLLGQD ADVAREAARF
201: SIYIIPSIYA MAINFGASKF LQAQSKVTVP AYIGFGALLI NVLLNYLFVY VLGWGLPGAA AAYDVAHWVI ALGQMAYIIG WCKDGWRGWS AAAFRDIWAF
301: VRLSFESAVM LCLEIWYMST ITVLTGDLED AQIAVDSLGI CMNINGWEGM IFIGLNAAIS VRVSNELGSG RPRAAWNAVM VVVGEALLIG IVCMALILIF
401: RDSFSIIFTS DATLQRAVAK IAGLLGLTMV LNSVQPVVSG VAVGGGWQGL VAYINLGCYY IFGLPLGYLL GYKFNFGVGG IWSGMLCGVT LQTIILLVVI
501: WRRDWKSEAA QASSRVQKWG GKGTDEVKPL LQ
Best Arabidopsis Sequence Match ( AT4G00350.1 )
(BLAST)
001: MEIPVREERR SSSSSAGPLQ QTISLAADDA IDSGPSSPLV VKVSVFETEH ETTKLIHAPS TLLGETTGDA DFPPIQSFRD AKLVCVVETS KLWEIAAPIA
101: FNILCNYGVN SFTSIFVGHI GDLELSAVAI ALSVVSNFSF GFLLGMASAL ETLCGQAFGA GQMDMLGVYM QRSWLILLGT SVCLLPLYIY ATPLLILLGQ
201: EPEIAEISGK FTTQIIPQMF ALAINFPTQK FLQSQSKVGI MAWIGFFALT LHIFILYLFI NVFKWGLNGA AAAFDVSAWG IAIAQVVYVV GWCKDGWKGL
301: SWLAFQDVWP FLKLSFASAV MLCLEIWYFM TIIVLTGHLE DPVIAVGSLS ICMNINGWEG MLFIGINAAI SVRVSNELGS GHPRAAKYSV IVTVIESLVI
401: GVVCAIVILI TRDDFAVIFT ESEEMRKAVA DLAYLLGITM ILNSLQPVIS GVAVGGGWQA PVAYINLFCY YAFGLPLGFL LGYKTSLGVQ GIWIGMICGT
501: SLQTLILLYM IYITNWNKEV EQASERMKQW GAGYEKLEKI AT
Arabidopsis Description
DTX34Protein DETOXIFICATION 34 [Source:UniProtKB/Swiss-Prot;Acc:F4JH46]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.