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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d023277_P001 Maize cytosol, peroxisome, plasma membrane 91.24 89.87
Os12t0125800-00 Rice golgi, peroxisome 29.9 87.22
EES09180 Sorghum cytosol, peroxisome, plasma membrane 86.86 86.2
Os11t0129000-00 Rice peroxisome, plasma membrane 76.95 85.96
Os11t0126100-01 Rice cytosol, peroxisome, plasma membrane 78.48 82.9
TraesCS5A01G349000.1 Wheat plasma membrane 66.86 81.63
TraesCS5D01G150100.1 Wheat cytosol, peroxisome, plasma membrane 75.43 78.42
TraesCS4B01G128600.1 Wheat plasma membrane 74.48 78.36
TraesCS5B01G350400.1 Wheat cytosol, plasma membrane, vacuole 73.33 78.25
TraesCS5A01G142000.1 Wheat cytosol, peroxisome, plasma membrane 75.24 78.22
Os12t0126000-01 Rice cytosol, peroxisome, plasma membrane 75.43 78.11
TraesCS4D01G123800.1 Wheat plasma membrane 73.9 77.91
HORVU5Hr1G045360.3 Barley cytosol, peroxisome, plasma membrane 74.86 77.51
TraesCS5D01G355500.1 Wheat plasma membrane 72.95 76.45
TraesCS5A01G349100.1 Wheat plasma membrane 72.19 76.41
TraesCS5B01G350500.1 Wheat plasma membrane 71.43 75.76
HORVU5Hr1G086830.4 Barley cytosol, peroxisome, plasma membrane 72.76 75.64
GSMUA_Achr7P21610_001 Banana plasma membrane 67.81 73.4
VIT_08s0056g00890.t01 Wine grape plasma membrane 56.95 69.21
Solyc03g063730.2.1 Tomato plasma membrane 53.14 67.55
VIT_08s0056g00780.t01 Wine grape golgi, peroxisome, plasma membrane 62.86 66.67
HORVU0Hr1G010460.2 Barley cytosol 13.33 66.04
PGSC0003DMT400031221 Potato cytosol, plasma membrane, vacuole 58.86 63.58
CDY01224 Canola plasma membrane 40.76 63.5
CDY44967 Canola plasma membrane 48.0 62.69
Bra040000.1-P Field mustard plasma membrane 47.81 62.59
PGSC0003DMT400060876 Potato cytosol, peroxisome, plasma membrane 57.52 61.89
KRG94946 Soybean plasma membrane 58.1 61.62
Bra040001.1-P Field mustard plasma membrane 57.52 61.26
CDX93794 Canola plasma membrane 57.52 61.26
KRH64945 Soybean golgi, peroxisome, plasma membrane 57.14 61.22
AT1G33110.1 Thale cress plasma membrane 57.33 60.93
KRG94947 Soybean golgi, peroxisome, plasma membrane 57.52 60.89
KRG94951 Soybean plasma membrane 46.29 60.75
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 56.95 60.53
KRH64948 Soybean golgi, peroxisome, plasma membrane 56.95 60.53
Bra040003.1-P Field mustard plasma membrane 41.71 60.5
KRH64943 Soybean plasma membrane 56.0 60.37
KRH64938 Soybean plasma membrane 55.81 60.04
Solyc10g080340.1.1 Tomato plasma membrane 57.52 59.57
KRG94953 Soybean golgi, peroxisome, plasma membrane 55.62 59.47
VIT_08s0056g00870.t01 Wine grape cytosol, peroxisome, plasma membrane 54.67 58.93
KRH64942 Soybean golgi, peroxisome, plasma membrane 54.48 58.73
KRH64944 Soybean plasma membrane 47.81 58.51
AT1G33080.1 Thale cress plasma membrane 55.05 58.5
AT1G33100.1 Thale cress plasma membrane 54.67 58.45
AT1G33090.1 Thale cress plasma membrane 54.48 57.89
Solyc08g005880.2.1 Tomato plasma membrane 57.14 56.18
PGSC0003DMT400011415 Potato plasma membrane 52.0 54.17
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 48.57 51.52
KXG35815 Sorghum plasma membrane 46.67 50.83
EER96893 Sorghum cytosol, peroxisome, vacuole 44.95 49.48
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 47.43 49.31
EER96891 Sorghum cytosol, peroxisome, plasma membrane 44.19 47.74
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 47.43 47.43
OQU87609 Sorghum plasma membrane 35.43 45.48
EER91319 Sorghum cytosol, peroxisome, plasma membrane 43.24 45.13
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 43.62 44.73
EES15223 Sorghum plasma membrane 43.24 44.69
EER91321 Sorghum plasma membrane 42.1 44.11
EER91211 Sorghum plasma membrane 41.33 44.02
OQU85978 Sorghum plasma membrane 34.67 43.86
KXG37120 Sorghum plasma membrane 41.52 43.17
OQU85979 Sorghum cytosol, peroxisome, vacuole 41.33 42.8
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 39.62 41.94
KXG38133 Sorghum cytosol, peroxisome, vacuole 40.95 41.67
CDX84047 Canola plasma membrane 54.86 40.91
EER93896 Sorghum cytosol, peroxisome, plasma membrane 40.38 40.46
OQU80697 Sorghum cytosol 39.81 39.29
OQU79625 Sorghum golgi, plasma membrane, vacuole 35.24 36.2
OQU92001 Sorghum peroxisome 36.0 35.8
KXG38740 Sorghum plasma membrane 32.76 33.79
Protein Annotations
MapMan:24.2.4.1.1UniProt:C5YQQ9EnsemblPlants:EES15585ProteinID:EES15585ProteinID:EES15585.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF102EnsemblPlantsGene:SORBI_3008G019400unigene:Sbi.17384TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0001A88412RefSeq:XP_002441747.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:+:1665182..1669442
Molecular Weight (calculated)
56785.2 Da
IEP (calculated)
8.408
GRAVY (calculated)
0.698
Length
525 amino acids
Sequence
(BLAST)
001: MEKSTGGANG GEAAEEAKVP LLQPRAAAVG GGGGDSKAAA EEEDRAAVAA EDASWSTLPL RRRAWEENKK LWVVAGPSIF TRFASFGVTV ISQAFIGHIG
101: ATELAAYALV STVLMRFSNG ILLGMASALE TLCGQSYGAK QYHMLGIYLQ RSWIILFACS VVLLPVYLFT EPLLVALGQD PEISAVAGTI SLWYIPVMFS
201: YVWAFTLQMY LQAQSKNMII TYLAVLNLGL HLVLSWLLAV RLQLGLAGVM GSMVIAMWIP VFGQLAFVFF GGCPLTWTGF SSAAFADLGA IIKLSLSSGV
301: MLCLELWYNT ILVLLTGYMK NAEIALDALS ICLNINGWEM MVSIGFLAAA GVRVANELGA GSARRAKFAI YNVVIISFSI GFVLFVLFLF FRGSLAYIFT
401: ESQAVAKAVA DLSPLLAFSI LLNSVQPVLS GVAVGAGWQS VVAYVNVTSY YLIGIPLGAV LGYVVGLHVK GIWIGMLLGT LVQTIVLLFI TLRTDWEKQV
501: VTAQERLKKW YMEENRRLQA SRRNP
Best Arabidopsis Sequence Match ( AT1G33110.1 )
(BLAST)
001: MAGGGGELTA ALLKKTAENG GEEKDELGLK QKVWIESKKL WIVAAPAIFT RFSTFGVSII SQSFIGHLGP IELAAYSITF TVLLRFSNGI LLGMASALET
101: LCGQAYGAKQ NHMLGIYLQR SWIVLTGCTI CLTPVYIFSG PILLALGQEE RIVRVARIIA LWVIGINFSF VPSFTCQMFL QAQSKNKIIA YVAAVSLGVH
201: VFLSWLLMVH FNFGITGAMT STLVAFWLPN IAQLLFVTCG GCKDTWRGFS MMAFKDLWPV FKLSMSSGGM LCLELWYNSI LVLLTGNLKN AEVALDALAI
301: CLNINGLEMM IALGFLAAAS VRVSNELGSG NPKGAKFATL TAVFTSLSLG IVLFFVFLFL RGRVSYIFTT SEAVAAEVAD LSPLLAFSIL MNSVQPVLSG
401: VAVGAGWQGY VTYVNLACYY LVGIPIGIIL GYVVGLQVKG VWIGMLFGIF VQTCVLTVMT LRTDWDQQVS TSLRRLNRWV VPESRDVNQV SSEE
Arabidopsis Description
DTX21Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WPH4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.