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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER96893 Sorghum cytosol, peroxisome, vacuole 76.14 76.94
TraesCS5D01G254500.1 Wheat mitochondrion, plasma membrane 47.51 74.11
EER96891 Sorghum cytosol, peroxisome, plasma membrane 73.44 72.84
TraesCS5B01G245500.1 Wheat plasma membrane 70.33 71.07
TraesCS5A01G247900.1 Wheat golgi, peroxisome, plasma membrane 69.29 70.17
Os09t0468000-01 Rice plasma membrane 67.01 67.01
TraesCS5D01G254400.1 Wheat plasma membrane 65.35 66.88
TraesCS5B01G245400.1 Wheat plasma membrane 64.94 66.45
HORVU5Hr1G069900.5 Barley golgi 69.5 65.43
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 24.07 63.04
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 61.0 59.39
Bra024381.1-P Field mustard plasma membrane 56.43 56.2
Bra037814.1-P Field mustard plasma membrane 56.02 55.9
CDX81281 Canola plasma membrane 56.02 55.79
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 55.39 55.51
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 58.09 55.45
AT5G65380.1 Thale cress cytosol, peroxisome, plasma membrane 55.39 54.94
CDX78379 Canola peroxisome, plasma membrane, vacuole 52.07 54.33
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 53.94 53.94
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 52.9 53.91
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 58.71 53.9
VIT_18s0001g06790.t01 Wine grape plasma membrane 54.56 53.67
CDX81176 Canola plasma membrane 54.15 53.48
Bra006059.1-P Field mustard plasma membrane 53.73 53.18
KRH74515 Soybean cytosol, peroxisome, plasma membrane 54.15 53.16
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 54.15 52.94
VIT_18s0001g06820.t01 Wine grape plasma membrane 52.9 52.69
CDX69835 Canola plasma membrane 53.11 52.57
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 53.73 52.54
CDX78378 Canola plasma membrane 52.7 52.37
CDX81172 Canola plasma membrane 52.49 52.16
CDX97005 Canola plasma membrane 52.49 51.95
PGSC0003DMT400005437 Potato cytosol, peroxisome, plasma membrane 53.73 51.9
CDY33962 Canola plasma membrane 34.23 51.56
CDY14558 Canola plasma membrane 34.44 51.55
CDY08798 Canola cytosol, peroxisome, plasma membrane 34.23 51.4
AT5G10420.1 Thale cress plasma membrane 52.07 51.33
CDX69834 Canola plasma membrane 50.62 51.26
CDY40093 Canola plasma membrane 53.32 51.2
CDY40095 Canola plasma membrane 51.45 50.92
AT5G44050.1 Thale cress plasma membrane 51.87 50.92
Bra009034.1-P Field mustard plasma membrane 45.23 50.82
CDX85764 Canola plasma membrane 52.7 50.8
PGSC0003DMT400005432 Potato plasma membrane 49.59 50.42
CDY08796 Canola plasma membrane 56.43 50.18
CDX97001 Canola plasma membrane 51.04 50.1
Solyc04g074840.2.1 Tomato plasma membrane 52.28 50.1
CDY61495 Canola plasma membrane 56.43 49.91
KRH62283 Soybean cytosol, peroxisome, plasma membrane 52.07 49.9
CDY70471 Canola cytosol, peroxisome, plasma membrane 31.33 49.84
CDX81174 Canola plasma membrane 41.49 49.26
CDY54720 Canola plasma membrane 56.02 48.04
Bra006058.1-P Field mustard plasma membrane 51.87 47.53
KRH62279 Soybean cytosol, peroxisome, plasma membrane 50.83 46.76
EES15585 Sorghum cytosol, peroxisome, plasma membrane 50.83 46.67
Bra024379.1-P Field mustard plasma membrane 54.56 46.3
CDY08797 Canola plasma membrane 54.15 46.19
EES09180 Sorghum cytosol, peroxisome, plasma membrane 49.59 45.18
Bra028589.1-P Field mustard peroxisome 38.17 44.34
EES15223 Sorghum plasma membrane 45.02 42.72
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 45.02 42.38
EER91319 Sorghum cytosol, peroxisome, plasma membrane 43.98 42.15
OQU87609 Sorghum plasma membrane 35.48 41.81
EER91211 Sorghum plasma membrane 42.74 41.78
EER91321 Sorghum plasma membrane 42.32 40.72
OQU85979 Sorghum cytosol, peroxisome, vacuole 42.74 40.63
KXG38133 Sorghum cytosol, peroxisome, vacuole 43.15 40.31
Solyc04g074860.2.1 Tomato plasma membrane 47.51 40.25
KXG37120 Sorghum plasma membrane 42.12 40.2
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 41.08 39.92
OQU85978 Sorghum plasma membrane 33.61 39.04
OQU80697 Sorghum cytosol 42.95 38.91
EER93896 Sorghum cytosol, peroxisome, plasma membrane 41.91 38.55
OQU79625 Sorghum golgi, plasma membrane, vacuole 39.83 37.57
OQU92001 Sorghum peroxisome 37.34 34.09
KXG38740 Sorghum plasma membrane 35.89 33.99
CDX69836 Canola plasma membrane 51.66 24.27
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1B6QD17GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlants:KXG35815ProteinID:KXG35815ProteinID:KXG35815.1InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF150EnsemblPlantsGene:SORBI_3002G232500TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI00081AD063
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:+:62342718..62346105
Molecular Weight (calculated)
52379.7 Da
IEP (calculated)
8.438
GRAVY (calculated)
0.666
Length
482 amino acids
Sequence
(BLAST)
001: MEENRSDIPL ISGSELPDRR GGGKISELAK EVWGESKKLW VVAGPAAFTR LTFYGMTVVS QAFAGHIGDL ELAAFSIATT VISGLSFGFF VGMASAMETL
101: CGQAYGAKQY HMMGIYLQRS WLILLSFAVL LTPTYIFSEQ LLTALGQPAE LSRQAGLVSL YMLPLHFVYA IVLPLNKFLQ CQRKNWVAAV TTAAAFPVHV
201: VATWLLVRCF RLGVFGAAMA LTLSWALATV GLLSYALGGG CPETWRGFSA SAFVDLKDFI KLSAASGVML CLENWYYRIL VFLTGYVKNA ELAVDALSIC
301: ISYAGWEMMI HLGFLAGTGV RVANELGAAN GARARFATIV SMTTSFLISL FISLLILIFH DKLGMIFSSS QAVIDAVDNI SFLLALTILL NGIQPVLSGV
401: AVGSGWQALV AYVNIGSYYL IGVPFGFLLG WGLHYGVQGI WVGMIVGTMV QTLILAYITL RCDWNEEALK ASTRMRRWSN SK
Best Arabidopsis Sequence Match ( AT5G65380.1 )
(BLAST)
001: MRGGDGEEGS ESRVALLKSP HTAEEDGEGL KDRILVETKK LWQIVGPAIF SRVTTYSMLV ITQAFAGHLG DLELAAISIV NNVTVGFNFG LLLGMASALE
101: TLCGQAFGAK KYHMLGVYMQ RSWIVLFFCC VLLLPTYIFT TPVLKFLGQP DDIAELSGVV AIWVIPLHFA FTLSFPLQRF LQCQLKNRVT AYAAAVALVV
201: HILVCWLFVD GLKLGVVGTV ATISISWWVN VLILLVYSTC GGCPLTWTGL SSEALTGLWE FLKLSASSGV MLCLENWYYR ILIIMTGNLQ NARIAVDSLS
301: ICMAINGWEM MIPLAFFAGT GVRVANELGA GNGKGARFAT IVSVTQSLII GLFFWVLIML LHNQIAWIFS SSVAVLDAVN KLSLLLAFTV LLNSVQPVLS
401: GVAVGSGWQS YVAYINLGCY YCIGVPLGFL MGWGFKLGVM GIWGGMIFGG TAVQTMILSF ITMRCDWEKE AQKASARINK WSNTIK
Arabidopsis Description
DTX27Protein DETOXIFICATION 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKQ1]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.