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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, vacuole
Any Predictor:cytosol, nucleus, peroxisome, vacuole
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:vacuole
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 78.3 78.0
TraesCS6D01G384400.1 Wheat plastid 78.11 71.1
TraesCS6A01G400200.1 Wheat cytosol, peroxisome, plasma membrane 77.71 70.48
TraesCS6B01G440400.1 Wheat cytosol, peroxisome, plasma membrane 77.71 70.48
GSMUA_Achr1P15340_001 Banana plasma membrane 65.48 69.89
GSMUA_Achr7P04510_001 Banana plasma membrane 52.66 67.09
Os02t0821600-00 Rice plasma membrane 64.5 66.6
GSMUA_AchrUn_... Banana golgi, peroxisome, vacuole 65.68 65.81
OQU85978 Sorghum plasma membrane 53.45 65.3
Zm00001d051886_P001 Maize cytosol, peroxisome, plasma membrane 88.17 64.6
VIT_15s0046g01800.t01 Wine grape plasma membrane 59.17 62.11
Bra013906.1-P Field mustard plasma membrane 56.41 58.49
KRG91572 Soybean vacuole 56.8 58.3
KRH00809 Soybean plasma membrane 57.99 58.22
Bra019147.1-P Field mustard plasma membrane 55.82 57.99
KRH35253 Soybean plasma membrane 56.21 57.69
KRH40412 Soybean plasma membrane 57.99 57.65
PGSC0003DMT400076953 Potato plasma membrane 57.4 57.51
AT4G25640.2 Thale cress plasma membrane 57.4 56.61
Solyc06g036130.2.1 Tomato plasma membrane 56.21 56.55
PGSC0003DMT400026355 Potato plasma membrane 55.62 55.95
Solyc03g025190.2.1 Tomato plasma membrane 55.82 55.93
CDX89406 Canola plasma membrane 56.41 55.86
VIT_16s0050g00930.t01 Wine grape plasma membrane 54.24 55.78
CDX94432 Canola plasma membrane 56.21 55.77
VIT_16s0050g00910.t01 Wine grape plasma membrane 53.45 55.42
Solyc03g025240.1.1 Tomato plasma membrane 43.59 55.39
AT4G00350.1 Thale cress cytosol, peroxisome, plasma membrane 59.17 55.35
OQU80697 Sorghum cytosol 57.2 54.51
VIT_16s0050g00900.t01 Wine grape plasma membrane 52.47 54.4
Solyc03g025200.2.1 Tomato plasma membrane 50.69 54.11
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 57.79 53.96
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 57.79 53.96
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 54.44 53.8
Solyc03g025230.2.1 Tomato plasma membrane 52.47 53.2
PGSC0003DMT400026353 Potato plasma membrane 51.68 52.09
Solyc03g025250.2.1 Tomato plasma membrane 51.08 51.7
CDY49481 Canola plasma membrane 44.18 51.26
OQU87609 Sorghum plasma membrane 41.03 50.86
Bra010453.1-P Field mustard plasma membrane 48.32 50.2
CDX92726 Canola nucleus, peroxisome, plasma membrane 56.61 47.99
CDY50190 Canola nucleus, peroxisome, plasma membrane 56.8 47.76
Solyc03g025220.2.1 Tomato plasma membrane 47.34 47.52
EES15223 Sorghum plasma membrane 47.14 47.05
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 47.14 46.68
KRH08881 Soybean plasma membrane 43.2 45.91
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 44.77 45.86
KRH38402 Soybean plasma membrane 43.39 45.08
EER91211 Sorghum plasma membrane 43.0 44.22
KRH38403 Soybean plasma membrane 42.41 44.06
KXG37120 Sorghum plasma membrane 43.79 43.96
KRH08883 Soybean plasma membrane 42.21 43.85
EER91321 Sorghum plasma membrane 43.2 43.71
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 44.58 43.05
KXG35815 Sorghum plasma membrane 40.63 42.74
EER96893 Sorghum cytosol, peroxisome, vacuole 40.04 42.56
EER91319 Sorghum cytosol, peroxisome, plasma membrane 42.21 42.54
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 41.42 42.34
KXG38133 Sorghum cytosol, peroxisome, vacuole 42.8 42.05
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 41.42 41.58
EER96891 Sorghum cytosol, peroxisome, plasma membrane 39.65 41.36
EES15585 Sorghum cytosol, peroxisome, plasma membrane 42.8 41.33
EER93896 Sorghum cytosol, peroxisome, plasma membrane 42.6 41.22
EES09180 Sorghum cytosol, peroxisome, plasma membrane 42.01 40.26
OQU92001 Sorghum peroxisome 39.84 38.26
KXG38740 Sorghum plasma membrane 37.08 36.94
OQU79625 Sorghum golgi, plasma membrane, vacuole 36.29 36.01
KRH38401 Soybean plasma membrane 35.5 34.48
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1Z5RQY9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famEnsemblPlants:OQU85979ProteinID:OQU85979ProteinID:OQU85979.1PFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF184EnsemblPlantsGene:SORBI_3004G349600TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B8BA12C
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr4:+:67847974..67850302
Molecular Weight (calculated)
53732.8 Da
IEP (calculated)
4.881
GRAVY (calculated)
0.709
Length
507 amino acids
Sequence
(BLAST)
001: MVVAVCDDDD DDDDEEEAGA LVAAIGSTRD APAVHSPRAA WAVFVKESRR LWSIAAPIAF NIMCMYGTNS TTQIFAGHIG NRELSAVAIG LSVVSNFSFG
101: FLLGMGSALE TLCGQAYGAG QVAMLGVYMQ RSWIVLAASA ALLTPLYVYA APVLRLLGQD EGIAGAAGTF TRGIIPQMFA LAVNFPAQKF LQAQSKVGVM
201: AWIGLAALLA HVALLALLVS VLGWGVAGAA LAYDTSSWLT SLAQVAYVVG WCPDGWTGLS RAAFTDLWAF VKLSLASAVM LCLEMWYMML LVVLTGHLDD
301: AEIAVDSIAI CMNINGWEGM LFIGLSAAIS VRVSNELGSG RPRASMYAVM VVLAQSLALG LLAMVLVLAT REQFPAIFTG DRHLQKAVSS IGYLLAVTMV
401: LNSVQPVISG VAVGGGWQAV VAYINLGCYY AFGLPLGFIL GYLFRFGVKG IWAGMLCGTA LQTAILSYIV WTTDWKAEAS LALERVRIWG GAHHEKLGSS
501: QDDDAVI
Best Arabidopsis Sequence Match ( AT4G00350.1 )
(BLAST)
001: MEIPVREERR SSSSSAGPLQ QTISLAADDA IDSGPSSPLV VKVSVFETEH ETTKLIHAPS TLLGETTGDA DFPPIQSFRD AKLVCVVETS KLWEIAAPIA
101: FNILCNYGVN SFTSIFVGHI GDLELSAVAI ALSVVSNFSF GFLLGMASAL ETLCGQAFGA GQMDMLGVYM QRSWLILLGT SVCLLPLYIY ATPLLILLGQ
201: EPEIAEISGK FTTQIIPQMF ALAINFPTQK FLQSQSKVGI MAWIGFFALT LHIFILYLFI NVFKWGLNGA AAAFDVSAWG IAIAQVVYVV GWCKDGWKGL
301: SWLAFQDVWP FLKLSFASAV MLCLEIWYFM TIIVLTGHLE DPVIAVGSLS ICMNINGWEG MLFIGINAAI SVRVSNELGS GHPRAAKYSV IVTVIESLVI
401: GVVCAIVILI TRDDFAVIFT ESEEMRKAVA DLAYLLGITM ILNSLQPVIS GVAVGGGWQA PVAYINLFCY YAFGLPLGFL LGYKTSLGVQ GIWIGMICGT
501: SLQTLILLYM IYITNWNKEV EQASERMKQW GAGYEKLEKI AT
Arabidopsis Description
DTX34Protein DETOXIFICATION 34 [Source:UniProtKB/Swiss-Prot;Acc:F4JH46]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.