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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78378 Canola plasma membrane 96.49 96.49
CDX81176 Canola plasma membrane 82.68 82.17
CDX78379 Canola peroxisome, plasma membrane, vacuole 77.73 81.6
CDY40093 Canola plasma membrane 83.51 80.68
CDX85764 Canola plasma membrane 83.09 80.6
CDX69835 Canola plasma membrane 80.21 79.88
CDX97005 Canola plasma membrane 80.21 79.88
CDY40095 Canola plasma membrane 79.38 79.06
CDX69834 Canola plasma membrane 76.08 77.52
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 29.28 77.17
CDX97001 Canola plasma membrane 77.94 76.99
CDX81174 Canola plasma membrane 64.33 76.85
CDX81281 Canola plasma membrane 70.1 70.25
CDY33962 Canola plasma membrane 45.36 68.75
CDY70471 Canola cytosol, peroxisome, plasma membrane 41.65 66.67
GSMUA_Achr7P11770_001 Banana plasma membrane 58.56 66.2
CDY14558 Canola plasma membrane 43.51 65.53
CDY08798 Canola cytosol, peroxisome, plasma membrane 43.3 65.42
CDY08796 Canola plasma membrane 72.16 64.58
CDY61495 Canola plasma membrane 72.16 64.22
KRH74515 Soybean cytosol, peroxisome, plasma membrane 64.12 63.34
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 62.89 61.87
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 62.89 61.87
GSMUA_Achr8P18130_001 Banana mitochondrion, plasma membrane, vacuole 61.86 61.48
GSMUA_Achr3P21260_001 Banana plasma membrane 58.14 61.3
CDY54720 Canola plasma membrane 70.52 60.85
TraesCS4A01G404500.1 Wheat cytosol, peroxisome, plasma membrane 61.44 60.2
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 61.24 60.12
CDY08797 Canola plasma membrane 69.9 60.0
TraesCS4B01G304300.1 Wheat cytosol, peroxisome, plasma membrane 61.03 59.8
GSMUA_Achr7P12820_001 Banana cytosol 53.2 59.58
Zm00001d027982_P002 Maize cytosol, peroxisome, plasma membrane 59.59 59.47
TraesCS4D01G302500.1 Wheat cytosol, peroxisome, plasma membrane 60.62 59.39
TraesCS5D01G254500.1 Wheat mitochondrion, plasma membrane 36.7 57.61
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 56.29 56.76
GSMUA_Achr6P04190_001 Banana plasma membrane 50.52 56.71
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 61.24 56.57
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 57.73 55.45
TraesCS5A01G247900.1 Wheat golgi, peroxisome, plasma membrane 53.61 54.62
TraesCS5B01G245500.1 Wheat plasma membrane 53.61 54.51
TraesCS5B01G245400.1 Wheat plasma membrane 52.78 54.35
TraesCS7D01G129700.1 Wheat plasma membrane 53.4 53.85
TraesCS5D01G254400.1 Wheat plasma membrane 52.16 53.72
Os08t0480000-01 Rice plasma membrane 54.02 53.58
Zm00001d050457_P002 Maize plasma membrane 52.99 53.21
Os09t0468000-01 Rice plasma membrane 52.58 52.9
TraesCS7A01G130300.1 Wheat plasma membrane 52.99 52.88
TraesCS7B01G030600.1 Wheat plasma membrane 53.2 52.87
KXG35815 Sorghum plasma membrane 52.16 52.49
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 52.99 51.92
EER96891 Sorghum cytosol, peroxisome, plasma membrane 51.96 51.85
HORVU5Hr1G069900.5 Barley golgi 53.61 50.78
EER96893 Sorghum cytosol, peroxisome, vacuole 49.9 50.73
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 54.02 50.1
CDY01224 Canola plasma membrane 34.43 49.55
CDY44967 Canola plasma membrane 38.97 47.01
CDY33131 Canola golgi, plasma membrane, vacuole 16.91 46.59
CDY06731 Canola cytosol, peroxisome, plasma membrane 45.57 45.66
CDY17070 Canola cytosol, peroxisome, plasma membrane 45.36 45.45
CDY07257 Canola endoplasmic reticulum, vacuole 30.52 45.26
CDX93794 Canola plasma membrane 45.77 45.03
CDX94432 Canola plasma membrane 43.51 41.29
CDX89406 Canola plasma membrane 43.3 41.02
CDY25329 Canola plasma membrane 42.06 40.72
CDY47166 Canola plasma membrane 42.06 40.72
CDX94064 Canola plasma membrane 34.64 40.58
CDY33129 Canola cytosol, peroxisome, plasma membrane 42.06 40.4
CDY19507 Canola cytosol, plasma membrane, vacuole 41.65 40.32
CDY12916 Canola cytosol, plasma membrane, vacuole 41.44 40.12
CDX94061 Canola peroxisome, plasma membrane, vacuole 41.86 40.04
CDX98711 Canola peroxisome, plasma membrane, vacuole 41.86 40.04
CDX92916 Canola cytosol, plasma membrane, vacuole 41.65 40.0
CDY65669 Canola cytosol, peroxisome, plasma membrane 40.82 40.0
CDY21076 Canola cytosol, peroxisome, plasma membrane 42.68 39.88
CDY34637 Canola plasma membrane 37.73 39.87
CDY38631 Canola cytosol, peroxisome, vacuole 42.06 39.84
CDX76391 Canola plasma membrane 41.24 39.84
CDY27434 Canola plasma membrane 41.24 39.84
CDX79109 Canola plasma membrane 40.82 39.84
CDY64933 Canola plasma membrane 41.44 39.8
CDY39493 Canola cytosol, peroxisome, plasma membrane 41.24 39.76
CDY21177 Canola plasma membrane 40.82 39.76
CDY19294 Canola cytosol, peroxisome, plasma membrane 42.06 39.69
CDY39494 Canola cytosol, peroxisome, plasma membrane 42.06 39.69
CDY34833 Canola plasma membrane 37.53 39.65
CDY34598 Canola cytosol, peroxisome, vacuole 42.27 39.5
CDY50654 Canola plasma membrane 40.62 39.48
CDY51758 Canola plasma membrane 40.62 39.48
CDY13643 Canola cytosol, peroxisome, plasma membrane 40.82 39.36
CDY29945 Canola plasma membrane 40.41 39.36
CDY38453 Canola plasma membrane 32.16 39.2
CDX83628 Canola plasma membrane 31.75 39.19
CDX83627 Canola cytosol, peroxisome, plasma membrane 40.62 39.16
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 43.71 39.04
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 43.71 39.04
CDY26602 Canola cytosol, peroxisome, vacuole 41.65 38.92
CDX94063 Canola plasma membrane 40.62 38.86
CDY16041 Canola cytosol, peroxisome, vacuole 41.44 38.73
CDX98712 Canola plasma membrane 40.41 38.66
CDY27431 Canola plasma membrane 40.41 38.66
CDX69836 Canola plasma membrane 81.65 38.6
CDX98713 Canola plasma membrane 36.08 38.46
CDY49481 Canola plasma membrane 34.64 38.44
CDY24250 Canola cytosol, peroxisome, plasma membrane 24.54 37.54
CDX76392 Canola plasma membrane 35.67 37.53
CDY69153 Canola cytosol, peroxisome, plasma membrane 23.71 36.28
CDX67772 Canola plasma membrane 37.53 35.9
CDX98344 Canola plasma membrane 37.53 35.9
CDY64820 Canola plasma membrane 38.35 35.63
CDY33130 Canola cytosol, peroxisome, vacuole 22.47 35.39
CDX92726 Canola nucleus, peroxisome, plasma membrane 43.09 34.95
CDY16896 Canola plasma membrane 35.67 34.88
CDY50190 Canola nucleus, peroxisome, plasma membrane 43.3 34.83
CDY19295 Canola cytosol, peroxisome, plasma membrane 21.44 34.21
CDX84047 Canola plasma membrane 44.33 30.54
Protein Annotations
EnsemblPlants:CDX81172EnsemblPlantsGene:GSBRNA2T00134630001GO:A0A078CWQ6GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF80PFAM:PF01554ProteinID:CDX81172
ProteinID:CDX81172.1TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EF1341MapMan:24.2.4.1.1:
Description
BnaC03g04260D
Coordinates
chrLK031823:-:2038046..2041139
Molecular Weight (calculated)
53620.5 Da
IEP (calculated)
8.384
GRAVY (calculated)
0.649
Length
485 amino acids
Sequence
(BLAST)
001: MAKRDDETEG IEKSRDQYGE EEQNGDIKRE TWMETKKLWR IVGPAIFAKI STYSIFVITQ AFAGHLGELE LAAIAIVQNV IIGFSIGLFL GMASALQTLC
101: GQAFGAKKFD MLGVYMQRSW IVLFLFAILL LPVYLFASPI LKFFGQPEDV AKLSGTVAVW TIPTHFAFAL YFPLSRFLQC QLKNRVVAIS SGVALVVHIF
201: VCWLFVYGLK LGPIGTMATI NVSWCVNVFI LYTYATCGGC PLTWTGFSIE AFTRLWDFAK LSASSGIMLC LENWYYKILI MMTGNLKDTK IAIDSLSICM
301: SINGLEMMIP LAFFAGTGVR VANELGAGNG RGARFAMIVS VTESLIIGIV FSMLVVFLHD QIGWIFSSSD TIIKAVNDLS ILLAFTILLN SIQPVLSGVA
401: VGSGWQSFVA YINLGCYYFI GLPLGFVMGW IFKYGVKGIW AGMIFGGTGV QTLILIFIVM RCDWEKEAQK ATVHVKKWSV SNSRN
Best Arabidopsis Sequence Match ( AT1G33100.1 )
(BLAST)
001: MAGRGGELTE ALVKKTGREE EDELGMKEKV WIESKKLWVV AAPAIFTRYS TFGVSMVTQA FIGHLGPTEL AAYSITFTIL LRFSNGILLG MAGALGTLCG
101: QAYGAKQYQM LGIYLQRSWI VLTGGTICLM PVFIFAGPIL LALGQEERIV RVARVLALWV IGINFSFVPS FTCQMFLQAQ SKNKIISYVT AVSLGLHVFF
201: SWLLVAHFNF GITGAMTSML IAFWLPIIVQ LLYVTCGGCK DTWRGFSMLA FKDLWPVLKL SLSSGGMLCL ELWYNSVLVL LTGNLKNAEV ALDALAICIS
301: INALEMMIAL GFLAAVSVRV SNELGSGNPK GAKFATLIAV FTSLSIGIVL FFVFLFLRGR ISYIFTTSEA VAAEVADLSP LLAFSILLNS VQPVLSGVAI
401: GAGWQGYVAY VNLACYYLVG IPIGVILGYV VGLQVKGVWI GMLFGIFVQT CVLTVMTLRT DWDQQVSTSL RNINRWVVPE SRDANQISSE E
Arabidopsis Description
DTX20Protein DETOXIFICATION 20 [Source:UniProtKB/Swiss-Prot;Acc:F4HPH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.