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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27431 Canola plasma membrane 99.35 90.34
Bra020863.1-P Field mustard plasma membrane 98.05 89.15
CDX98712 Canola plasma membrane 89.8 81.66
CDX94063 Canola plasma membrane 88.07 80.08
CDY27434 Canola plasma membrane 82.21 75.5
CDX79109 Canola plasma membrane 81.13 75.25
CDX76391 Canola plasma membrane 81.56 74.9
CDX98713 Canola plasma membrane 72.67 73.63
CDX98711 Canola peroxisome, plasma membrane, vacuole 80.04 72.78
AT4G21910.4 Thale cress plasma membrane 80.04 72.5
CDX94061 Canola peroxisome, plasma membrane, vacuole 79.61 72.39
CDX94064 Canola plasma membrane 64.43 71.74
AT4G21903.2 Thale cress plasma membrane 78.52 70.02
VIT_10s0116g01880.t01 Wine grape plasma membrane 62.47 56.58
CDY34637 Canola plasma membrane 55.31 55.56
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 60.09 55.51
CDY25329 Canola plasma membrane 60.3 55.49
CDY34833 Canola plasma membrane 55.1 55.34
CDY64933 Canola plasma membrane 60.52 55.25
CDY47166 Canola plasma membrane 59.87 55.09
VIT_10s0116g01870.t01 Wine grape plastid 60.74 54.9
CDY69153 Canola cytosol, peroxisome, plasma membrane 37.74 54.89
CDY24250 Canola cytosol, peroxisome, plasma membrane 37.53 54.57
CDY19507 Canola cytosol, plasma membrane, vacuole 59.22 54.49
CDY12916 Canola cytosol, plasma membrane, vacuole 59.22 54.49
CDY07257 Canola endoplasmic reticulum, vacuole 38.61 54.43
CDY33130 Canola cytosol, peroxisome, vacuole 36.01 53.9
CDY64820 Canola plasma membrane 60.09 53.07
CDY33129 Canola cytosol, peroxisome, plasma membrane 57.7 52.67
KRH11419 Soybean plasma membrane 57.05 52.08
CDX92916 Canola cytosol, plasma membrane, vacuole 57.05 52.08
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 59.44 51.89
CDY38631 Canola cytosol, peroxisome, vacuole 57.48 51.76
CDY19294 Canola cytosol, peroxisome, plasma membrane 57.05 51.17
CDY19295 Canola cytosol, peroxisome, plasma membrane 33.62 50.99
CDY39494 Canola cytosol, peroxisome, plasma membrane 56.83 50.97
CDY65669 Canola cytosol, peroxisome, plasma membrane 54.66 50.91
CDY39493 Canola cytosol, peroxisome, plasma membrane 55.1 50.5
CDY33131 Canola golgi, plasma membrane, vacuole 18.44 48.3
CDY01224 Canola plasma membrane 29.5 40.36
CDY44967 Canola plasma membrane 33.62 38.56
CDY06731 Canola cytosol, peroxisome, plasma membrane 40.13 38.22
CDY17070 Canola cytosol, peroxisome, plasma membrane 39.91 38.02
CDY13643 Canola cytosol, peroxisome, plasma membrane 41.43 37.97
CDX67772 Canola plasma membrane 41.65 37.87
CDX98344 Canola plasma membrane 41.65 37.87
CDX83627 Canola cytosol, peroxisome, plasma membrane 41.0 37.57
CDX93794 Canola plasma membrane 40.13 37.53
CDX83628 Canola plasma membrane 31.89 37.4
CDY34598 Canola cytosol, peroxisome, vacuole 41.87 37.19
CDX97005 Canola plasma membrane 39.26 37.17
CDX69835 Canola plasma membrane 38.83 36.76
CDY21076 Canola cytosol, peroxisome, plasma membrane 41.21 36.61
CDY26602 Canola cytosol, peroxisome, vacuole 41.21 36.61
CDY16041 Canola cytosol, peroxisome, vacuole 41.0 36.42
CDX78379 Canola peroxisome, plasma membrane, vacuole 36.44 36.36
CDY33962 Canola plasma membrane 25.16 36.25
CDX81176 Canola plasma membrane 37.96 35.86
CDX81281 Canola plasma membrane 37.53 35.74
CDY49481 Canola plasma membrane 33.84 35.7
CDX81172 Canola plasma membrane 37.53 35.67
CDY08798 Canola cytosol, peroxisome, plasma membrane 24.73 35.51
CDX69834 Canola plasma membrane 36.66 35.5
CDY14558 Canola plasma membrane 24.73 35.4
CDX85764 Canola plasma membrane 38.39 35.4
CDY40095 Canola plasma membrane 37.31 35.32
CDX78378 Canola plasma membrane 36.66 34.85
CDY40093 Canola plasma membrane 37.74 34.66
CDX97001 Canola plasma membrane 36.88 34.62
CDY38453 Canola plasma membrane 29.72 34.42
CDY70471 Canola cytosol, peroxisome, plasma membrane 22.56 34.32
CDY51758 Canola plasma membrane 36.44 33.67
CDX89406 Canola plasma membrane 37.31 33.59
CDY50654 Canola plasma membrane 36.23 33.47
CDX94432 Canola plasma membrane 36.88 33.27
CDY29945 Canola plasma membrane 35.79 33.13
CDX81174 Canola plasma membrane 29.07 33.0
CDY21177 Canola plasma membrane 35.57 32.93
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 13.02 32.61
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 38.39 32.6
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 38.18 32.41
CDY08796 Canola plasma membrane 37.74 32.1
CDY61495 Canola plasma membrane 37.53 31.74
CDY54720 Canola plasma membrane 37.96 31.14
CDY08797 Canola plasma membrane 35.79 29.2
CDY16896 Canola plasma membrane 31.02 28.83
CDY50190 Canola nucleus, peroxisome, plasma membrane 36.44 27.86
CDX92726 Canola nucleus, peroxisome, plasma membrane 36.01 27.76
CDX84047 Canola plasma membrane 38.61 25.28
CDX69836 Canola plasma membrane 38.39 17.25
Protein Annotations
EnsemblPlants:CDX76392EnsemblPlantsGene:GSBRNA2T00126785001GO:A0A078CI02GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF140PFAM:PF01554ProteinID:CDX76392
ProteinID:CDX76392.1TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EEB1F4MapMan:24.2.4.1.1:
Description
BnaA08g10080D
Coordinates
chrLK031807:+:901967..904760
Molecular Weight (calculated)
49633.3 Da
IEP (calculated)
7.461
GRAVY (calculated)
0.740
Length
461 amino acids
Sequence
(BLAST)
001: MGVSSDTVEK SDLQRPLVDP TNSDPKPPKD VGLESVLTDS SLSCRRRVYL GACMELKVLF RLALPAILVY LVNSGMSISA RIFSGHLGGQ ELAAASLGNS
101: CFFLVYGLML GMGSAVETLC GQAYGAQRFD MLGTYLQRAT IVLALVGLPM TVLYTFSYPI LLMLGEPKSV SYKASLYIAG LLPQIFAYAV NFTAQKFLQA
201: QSVVIPSAYI SGAALLLQIL LTWFAVNVMG MGLIGIACVL TVSWWVMVVA QTLYITCNER FKHTWTGLSS RSFQGLWSFF KLSVGSAVMI CLEMWYSQIL
301: VLLAGLLEEP ALSLDCLSIC MAVSALSFMV SVGFNAAASI RTSNELGAGN PKSALFSTWT ATFVSFMISV GEALVLMASR DYISYIFTSD ADVAKAVSDL
401: CPYLAVTVIL NGIQPVLSGV AVGCGWQTFV AYVNVGCYYV VGIPIGCVLG FTFNLQAKVR F
Best Arabidopsis Sequence Match ( AT4G21903.2 )
(BLAST)
001: MNGSNETVER RIELRRPLVD TEKKLPLEVG LESVLTESSL PYRRRVYLGM CIELKLLLRL ALPAILVYLI NGGMGISARI FAGHLGSTQL AAASIGNSSF
101: SLVYALMLGM GSAVETLCGQ AYGAHRYEML GIYLQRATIV LALVGFPMTI LYTFSYPILL LLGEPKTVSY MGSLYIAGLI PQIFAYAVYF TAQKFLQAQS
201: VVAPSAYISA AALVLQISLT WITVYAMGQG LMGIAYVLTI SWWFIVGAQT FYVITSVRFK DTWTGFSWKS LHGLWSFFKL SAGSAVMICL ELWYTQILVL
301: LAGLLKDPAL SLDSLSICMS ISALSFMVSV GFNAAVSVRT SNELGAGNPK SALFSTWTAT FVSFVISVVE ALVVIASRDN VSYIFTSDAD VAKAVSDLCP
401: FLAVTIILNG IQPVLSGVAV GCGWQTYVAY VNIGCYYIVG IPIGCILGFT FNFQAKGIWT GMIGGTLMQT LILLYVTYQA DWDKEVMLHE IKLKKRESDW
501: ICGTTKSLSR ISNFVMK
Arabidopsis Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F4JKB8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.